Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,922,629 IS5 (–) +4 bp intergenic (‑189/+425) atpI ← / ← rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3652036 =NA (NA)118 (0.890) 92/260 0.2 95.8% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3922632 5 (0.040)intergenic (‑192/+425) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein
* ? NC_000913 = 3653230NA (NA)178 (1.350) 127/260 0.0 97.2% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3922629 = 5 (0.040)intergenic (‑189/+428) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

Only 100 of 302 total aligned reads displayed.

TATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAA  >  NC_000913/3922484‑3922779
                                                                                                                                                    |                                                                                                                                                   
gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTaa                                                                                                                                                     <  7:136927‑M2/4‑1 (MQ=255)
 actaaacttTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAg                                                                                                                                                    >  5:77963‑M2/4‑148 (MQ=255)
   atgaacatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAcc                                                                                                                                                   <  1:159048‑M2/6‑1 (MQ=255)
       aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGtt                                                                                                                                              <  3:405341‑M2/11‑1 (MQ=255)
        aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTc                                                                                                                                             >  8:293441‑M2/138‑149 (MQ=255)
              tAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaa                                                                                                                                         >  1:110847‑M2/1‑135 (MQ=255)
               aaGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCAt                                                                                                                                       >  5:271888/1‑148 (MQ=255)
                ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATg                                                                                                                                      <  1:394567‑M2/19‑1 (MQ=255)
                 tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAcc                                                                                                                                                   >  6:204392‑M2/129‑134 (MQ=255)
                          tCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTa                                                                                                                            >  7:179652/1‑148 (MQ=255)
                            ggcgattaattctgaattcactgtctgctaaggtaatttgatgactcatgatgaaccctgttctatggctccagatgacaaacaagatctcatatcagggacttgttcgcaccttccCTAACCCTGTGCGATCATGAAAAACTCTaaa                                                                                                                          <  5:405583‑M2/31‑1 (MQ=255)
                                   actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAcgc                                                                                                                    <  4:462574‑M2/37‑1 (MQ=255)
                                       aGCGGTCAAATTATACGGATCGCCCCCGTGATTTCTAACAATAAGTAGCCAATAGGTCAATAAATGTATAAATATTTTTCCAGTGTATACAATTGCGACTTTTCTGGTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                              >  5:471430‑M2/1‑110 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac                                                                                                            >  5:576255‑M2/105‑149 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac                                                                                                            >  3:11212‑M2/105‑149 (MQ=255)
                                          ggTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataatcggggaaattcttatcgcctgact                                                                                                             <  6:483943‑M2/147‑41 (MQ=255)
                                          aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac                                                                                                            <  7:156560‑M2/45‑1 (MQ=255)
                                            ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTgg                                                                                                         >  5:193278‑M2/102‑149 (MQ=255)
                                            tCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                         <  2:441013‑M2/149‑45 (MQ=255)
                                            tCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                         >  8:336393‑M2/1‑105 (MQ=255)
                                             tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAc                                                                                                                      <  1:449461‑M2/35‑1 (MQ=255)
                                              aaaTTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                        >  1:541528‑M2/1‑103 (MQ=255)
                                                aTTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                     <  3:303503‑M2/149‑49 (MQ=255)
                                                 ttATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                    >  8:584216‑M2/1‑100 (MQ=255)
                                                 tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCt                                                                                                                                                 >  5:547964‑M2/97‑104 (MQ=255)
                                                 tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGAt                                                                                                     >  2:77617‑M2/97‑148 (MQ=255)
                                                  tataCGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaat                                                                                                                            >  7:485091‑M2/1‑99 (MQ=255)
                                                        gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTg                                                                                             >  7:282594‑M2/90‑149 (MQ=255)
                                                         tGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                            >  4:217359‑M2/1‑92 (MQ=255)
                                                          aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGc                                                                                            <  3:241009‑M2/61‑1 (MQ=255)
                                                           ggtaagttgatgactcatgatgaaccctgttctatggctacagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTa                                                                                                                            >  2:492059‑M2/87‑115 (MQ=255)
                                                              ccccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                       <  5:179555‑M2/149‑63 (MQ=255)
                                                              ccccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                       >  6:558557‑M2/1‑87 (MQ=255)
                                                              ccccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcgg                                                                                                                                  <  6:310386‑M2/106‑20 (MQ=255)
                                                              ccccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcgg                                                                                                                                  >  5:310386‑M2/1‑87 (MQ=255)
                                                               agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAaca                                                                                                             <  7:385264‑M2/44‑1 (MQ=255)
                                                                 ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc                                                                                    <  4:11212‑M2/69‑1 (MQ=255)
                                                                  gTGATGTCAAACAATAAGTAGCCAAAAGGTTAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                                   >  5:437391‑M2/1‑83 (MQ=255)
                                                                          aaaCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                           <  8:130665‑M2/149‑75 (MQ=255)
                                                                           atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTgcg                                                                          <  7:331660‑M2/79‑1 (MQ=255)
                                                                            aCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                         <  2:363530‑M2/149‑77 (MQ=255)
                                                                                tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                     <  6:570032‑M2/149‑81 (MQ=255)
                                                                                tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                     <  5:499616‑M2/149‑81 (MQ=255)
                                                                                   gTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                  <  1:82124‑M2/149‑84 (MQ=255)
                                                                                   gTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                   >  7:593487‑M2/1‑66 (MQ=255)
                                                                                   ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCg                                                                                               <  2:178665‑M2/58‑1 (MQ=255)
                                                                                   ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGt                                                                     >  8:168966‑M2/63‑146 (MQ=255)
                                                                                    tAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattattctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                  <  3:78137‑M2/148‑84 (MQ=255)
                                                                                    cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc                                                                                    <  6:94015‑M2/69‑1 (MQ=255)
                                                                                     ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgcg                                                                >  5:228308‑M2/61‑149 (MQ=255)
                                                                                     aGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                 <  2:114134‑M2/148‑85 (MQ=255)
                                                                                      tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcaca                                                                                 >  1:406091‑M2/60‑131 (MQ=255)
                                                                                         aaaaGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                            <  3:497761‑M2/149‑90 (MQ=255)
                                                                                         aaaaGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                         >  8:123865‑M2/1‑60 (MQ=255)
                                                                                         aaaaGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataa                                                                                                                                      <  3:320115‑M2/75‑16 (MQ=255)
                                                                                           tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAg                                                           <  2:405361‑M2/94‑1 (MQ=255)
                                                                                            atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCa                                                         >  8:207892‑M2/54‑149 (MQ=255)
                                                                                               gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCatat                                                      >  3:158932‑M2/51‑149 (MQ=255)
                                                                                                ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTaaa                                                                                                                          <  6:50741‑M2/31‑1 (MQ=255)
                                                                                                 tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATaa                                                                                                                       >  6:463505‑M2/49‑82 (MQ=255)
                                                                                                 aaTAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                    <  4:34136‑M2/149‑98 (MQ=255)
                                                                                                   tAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                              >  4:286509‑M2/1‑50 (MQ=255)
                                                                                                     aaTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                                >  1:363530‑M2/1‑48 (MQ=255)
                                                                                                      atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTgg                                                                                                         <  1:212392‑M2/48‑1 (MQ=255)
                                                                                                       tgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTAc                                              >  2:95618‑M2/43‑149 (MQ=255)
                                                                                                           aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAACGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACtt                                            <  3:489993‑M2/109‑1 (MQ=255)
                                                                                                            aaaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                           <  8:446369‑M2/147‑107 (MQ=255)
                                                                                                                  atctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAat                                     <  3:349874‑M2/116‑1 (MQ=255)
                                                                                                                     tcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGt                                                                     <  6:536879‑M2/84‑1 (MQ=255)
                                                                                                                       cAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt                              >  4:99029‑M2/1‑30 (MQ=255)
                                                                                                                        tatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCtt                             >  6:612768‑M2/26‑149 (MQ=255)
                                                                                                                        aGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                             >  7:130665‑M2/1‑29 (MQ=255)
                                                                                                                         atcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCGGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                            <  4:443898‑M2/125‑1 (MQ=255)
                                                                                                                         atcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTgg                                          >  4:246714‑M2/25‑135 (MQ=255)
                                                                                                                            agggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGa                                                                                      >  4:548442‑M2/22‑88 (MQ=255)
                                                                                                                            agggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGa                                                                                      <  3:548442‑M2/67‑1 (MQ=255)
                                                                                                                             gggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCaa                        <  2:557394‑M2/129‑1 (MQ=255)
                                                                                                                              ggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGt                                                                                                        >  7:255031‑M2/20‑68 (MQ=255)
                                                                                                                                 aaTTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                    >  7:459145‑M2/1‑20 (MQ=255)
                                                                                                                                   ttGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                  <  3:450711‑M2/149‑132 (MQ=255)
                                                                                                                                    gttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTAt                  <  4:50402‑M2/135‑1 (MQ=255)
                                                                                                                                     ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGt                                                                                              <  3:572547‑M2/59‑1 (MQ=255)
                                                                                                                                        gcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGatat             >  3:271547‑M2/10‑149 (MQ=255)
                                                                                                                                        gcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGata              <  6:185900‑M2/139‑1 (MQ=255)
                                                                                                                                          ttttCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgacttgaatcagcctatttaga                                       <  6:378588‑M2/121‑111 (MQ=255)
                                                                                                                                          ttttCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                     <  6:270012‑M2/75‑65 (MQ=255)
                                                                                                                                          accttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGcaca                                                            <  5:603712‑M2/93‑1 (MQ=255)
                                                                                                                                          accttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAttt           >  7:125320‑M2/8‑149 (MQ=255)
                                                                                                                                           ccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgc                                                                 <  5:520027‑M2/88‑1 (MQ=255)
                                                                                                                                            cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa         <  1:601744‑M2/144‑1 (MQ=255)
                                                                                                                                            cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa         <  8:479655‑M2/144‑1 (MQ=255)
                                                                                                                                            cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGGGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa         <  4:70588‑M2/144‑1 (MQ=255)
                                                                                                                                             ttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTa                   <  5:342876‑M2/134‑1 (MQ=255)
                                                                                                                                             ttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTa                   >  6:342876‑M2/5‑138 (MQ=255)
                                                                                                                                               tGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag      <  2:582935‑M2/149‑144 (MQ=255)
                                                                                                                                                gCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt     <  1:219922‑M2/149‑145 (MQ=255)
                                                                                                                                                cCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCTCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCt     <  8:27024‑M2/148‑1 (MQ=255)
                                                                                                                                                 cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt     >  2:219922‑M2/1‑4 (MQ=255)
                                                                                                                                                 cTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCt     >  1:560712/1‑148 (MQ=255)
                                                                                                                                                  tAACCCTGTTCGATCATGAAAAACTGTAAATAACTAGTAAACACTCGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGAACAGAATATTTAATTACTTGGAAAATGATGCCTTTGCAAGTTTATGCTATTTCAGTCTa    >  8:391897/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAA  >  NC_000913/3922484‑3922779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.