New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3802387 =309 (2.340)7 (0.070) 7/208 10.8 2.7% coding (672/1020 nt) waaO UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase
?NC_000913 3802413 = 249 (2.360)coding (646/1020 nt) waaO UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 251 total aligned reads displayed.

TGGATAAAAATAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTAGCAATTC  >  NC_000913/3802265‑3802532
                                                                                                                                                     |                                                                                                                       
  gATAAAAATAGTATCGTTGGTTCCGGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGATTATCCGCCAGCAACATATTTAACACATCCTGAGCAGGATGTGTTA‑tt                                                                                                                        <  3:426564/148‑1 (MQ=255)
      aaaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   <  6:117790/149‑1 (MQ=255)
      aaaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   <  8:376979/149‑1 (MQ=255)
      aaaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   <  1:311912/149‑1 (MQ=255)
       aaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   >  3:471003/1‑148 (MQ=255)
       aaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   >  4:528240/1‑148 (MQ=255)
       aaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   <  8:457346/148‑1 (MQ=255)
       aaaTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   >  5:146316/1‑148 (MQ=255)
         aTAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGat                                                                                                                >  2:120028/1‑149 (MQ=255)
             tATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGattatt                                                                                                            >  2:439756/1‑149 (MQ=255)
               tCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑tttttt                                                                                                                    >  7:85747/1‑139 (MQ=255)
                 gTTTGTTACTGGTTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGACCTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCt                                                                                                         <  3:341418/148‑1 (MQ=255)
                 gTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTg                                                                                                        >  1:50188/1‑149 (MQ=255)
                  ttGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTgg                                                                                                       <  6:15721/149‑1 (MQ=255)
                  ttGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTgg                                                                                                       <  1:439756/149‑1 (MQ=255)
                  ttGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTgg                                                                                                       >  4:264325/1‑149 (MQ=255)
                     gTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttt                                                                                                                     >  8:282385/1‑132 (MQ=255)
                         cagggTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCAtt                                                                                                 <  1:467300/146‑1 (MQ=255)
                         cTGGGTGTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACCTCCTGATCAGGATGTGTGA‑TTTTTTTGATTATTGCTGGCTCAtt                                                                                                 >  4:343050/1‑148 (MQ=255)
                          tGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   <  5:46219/129‑1 (MQ=255)
                            ggTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTa                                                                                               <  3:383644/147‑1 (MQ=255)
                            ggTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTa                                                                                               <  8:191617/147‑1 (MQ=255)
                            ggTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAg                                                                                              >  8:489411/1‑148 (MQ=255)
                                tataAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCAtt                                                                                          <  7:128255/148‑1 (MQ=255)
                                tataAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTg                                                                                         >  1:104286/1‑149 (MQ=255)
                                  taAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCAtt                                                                                                 >  5:386041/1‑139 (MQ=255)
                                  taAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGc                                                                                        >  4:300548/1‑148 (MQ=255)
                                   aaaGCTTTCTTTGAGTTGATAATTTAAGCTGGACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      >  7:44197/1‑149 (MQ=255)
                                   aaaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   >  3:91726/1‑120 (MQ=255)
                                   aaaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTc                                                                                                          >  7:110859/1‑129 (MQ=255)
                                   aaaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      >  5:398853/1‑149 (MQ=255)
                                    atgCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      <  6:94303/146‑1 (MQ=255)
                                    aaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGTGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAAt                                                                                     <  3:103119/149‑1 (MQ=255)
                                    aaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑ttttttt                                                                                                                   >  8:260340/1‑119 (MQ=255)
                                    aaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTa                                                                                               <  8:616192/139‑1 (MQ=255)
                                    aaGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      >  5:502425/1‑148 (MQ=255)
                                        tttctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCAtt                                                                                          >  2:534381/1‑140 (MQ=255)
                                        tttctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCt                                                                                 >  6:401685/1‑149 (MQ=255)
                                          tctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTa                                                                                               >  8:241079/1‑133 (MQ=255)
                                          tctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTc                                                                                <  2:69657/148‑1 (MQ=255)
                                          tctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTc                                                                                <  3:300548/148‑1 (MQ=255)
                                           ctttGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGt                                                                              >  4:427213/1‑149 (MQ=255)
                                                aGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAg                                                                          <  6:392778/148‑1 (MQ=255)
                                                     aTAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTg                                                                             >  3:193554/1‑140 (MQ=255)
                                                     aTAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTg                                                                             <  4:193554/140‑1 (MQ=255)
                                                         tttAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACctgct                                                                 <  6:21805/148‑1 (MQ=255)
                                                         tttAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACctgct                                                                 >  5:21805/1‑148 (MQ=255)
                                                           tAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGa                                                               <  2:17010/148‑1 (MQ=255)
                                                                tGAACTGGGAGTTATATTTAATATCAGCGAAAATAAGATTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTATTGATTATTTCTGGCTCATTTAGCATTGCAATAGATCGTGCATAAACCTGCTGAgcctcc                                                         >  1:539436/1‑149 (MQ=255)
                                                                   aCTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGATCGTGCAGAAACCTGCCGAGCCGCCCAt                                                      >  4:380501/1‑149 (MQ=255)
                                                                    cTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCAtt                                                     <  1:120028/149‑1 (MQ=255)
                                                                    cTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCAtt                                                     <  1:280078/149‑1 (MQ=255)
                                                                       ggTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTggg                                                  >  1:240467/1‑149 (MQ=255)
                                                                       ggTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTggg                                                  >  7:533995/1‑149 (MQ=255)
                                                                        gtgtTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTggg                                                  <  3:264325/148‑1 (MQ=255)
                                                                         tgtTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCAtt                                                                                          >  8:151165/1‑107 (MQ=255)
                                                                         cgtTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCa                                                <  6:203032/148‑1 (MQ=255)
                                                                          gtTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCa                                                <  7:92128/148‑1 (MQ=255)
                                                                            tataTTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGc                                                                            >  7:315465/1‑118 (MQ=255)
                                                                              tatTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTAt                                            <  5:9012/148‑1 (MQ=255)
                                                                               atTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACctgct                                                                 <  7:278656/126‑1 (MQ=255)
                                                                                tttAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTc                                                                                >  6:60384/1‑110 (MQ=255)
                                                                                tttAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAgcc                                                            <  4:493982/130‑1 (MQ=255)
                                                                                tttAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCAtt                                                     <  1:65466/137‑1 (MQ=255)
                                                                                tttAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAACCGCCCATTGGGCAGTATTaa                                         >  7:467974/1‑149 (MQ=255)
                                                                                 ttAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAAt                                        >  1:204587/1‑149 (MQ=255)
                                                                                  tAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGTAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAAt                                        <  7:587128/148‑1 (MQ=255)
                                                                                  tAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAAt                                        <  6:146316/148‑1 (MQ=255)
                                                                                  tAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAAt                                        <  2:104286/148‑1 (MQ=255)
                                                                                   aaTATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTggg                                                  <  2:586681/137‑1 (MQ=255)
                                                                                     tatCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCa                                                                           >  7:245307/1‑110 (MQ=255)
                                                                                       tCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCa                                                >  3:66422/1‑135 (MQ=255)
                                                                                        cAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGc                                                                                        <  6:271984/94‑1 (MQ=255)
                                                                                         aGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACctgct                                                                 >  8:559185/1‑116 (MQ=255)
                                                                                          gCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTa                                             >  8:433410/1‑135 (MQ=255)
                                                                                          gCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTGCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTa                                             <  7:433410/135‑1 (MQ=255)
                                                                                           cGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATaaaaaa                              <  2:240467/149‑1 (MQ=255)
                                                                                             aaaaTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAAcc                            <  7:489411/149‑1 (MQ=255)
                                                                                              aaaTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      <  6:65491/90‑1 (MQ=255)
                                                                                              aaaTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCaa                                                                                      >  5:65491/1‑90 (MQ=255)
                                                                                              aaaTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCg                           <  3:228254/149‑1 (MQ=255)
                                                                                               aaTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCgg                          <  3:505776/149‑1 (MQ=255)
                                                                                                aTAAGTTTATCCGCCAGCAACATATTTAACTCATCCTGTTCAGGTTGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGa                         <  6:582333/149‑1 (MQ=255)
                                                                                                aTAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGa                         <  2:50188/149‑1 (MQ=255)
                                                                                                aTAACTTTAACCGCCACCAAAATAATTAACACCTCCTGATCCTGTTTTTTTATTTTTTTTTATTATTT‑TTGCTTATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGa                         <  4:291522/149‑1 (MQ=255)
                                                                                                    gTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGtt                      >  7:159282/1‑148 (MQ=255)
                                                                                                       tATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTaaa                   <  8:91668/148‑1 (MQ=255)
                                                                                                       tATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTaaa                   <  4:75248/148‑1 (MQ=255)
                                                                                                        aTCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGa                         <  5:19569/141‑1 (MQ=255)
                                                                                                         tCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGt                 >  4:204212/1‑148 (MQ=255)
                                                                                                           cgacAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTaa               <  6:35153/145‑1 (MQ=255)
                                                                                                            gCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTaaa                   <  5:590655/143‑1 (MQ=255)
                                                                                                             ccAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAAc              >  5:347162/1‑147 (MQ=255)
                                                                                                             ccAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCt            <  7:219644/149‑1 (MQ=255)
                                                                                                                gCAACATATTTTACACATCCTGATCATTATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGGATTGCTATAGCTCGTGCAGATTCCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTa         <  8:115771/149‑1 (MQ=255)
                                                                                                                 cAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTaaa                   <  2:293647/138‑1 (MQ=255)
                                                                                                                 cAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTCACCTTTAg        >  1:577969/1‑149 (MQ=255)
                                                                                                                 cAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTAg        <  6:502425/149‑1 (MQ=255)
                                                                                                                 cAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTAg        <  4:236652/149‑1 (MQ=255)
                                                                                                                      tatTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTAGCAAtt   <  5:238772/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                       
TGGATAAAAATAGTATCGTTGGTTACTGGGTTTATAAAGCTTTCTTTGAGTTGATAATTTAAGCTGAACTGGGTGTTATATTTAATATCAGCGAAAATAAGTTTATCCGCCAGCAACATATTTAACACATCCTGATCAGGATGTGTTA‑TTTTTTTGATTATTTCTGGCTCATTTAGCATTGCAATAGCTCGTGCAGAAACCTGCTGAGCCGCCCATTGGGCAGTATTAATCAATAAAAAACCGGAGTTAAAGTAACCTTTAGCAATTC  >  NC_000913/3802265‑3802532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.