New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4623082	33 (0.870)	6 (0.160)	6/246	2.8	15.6%	coding (1314/1332 nt)	yjjJ	putative protein kinase
	?	NC_000913	= 4623098	33 (0.900)					coding (1330/1332 nt)	yjjJ	putative protein kinase
Rejected: Frequency below/above cutoff threshold.

AAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTGCGCGGTACAGGCAGCCTTG  >  NC_000913/4622945‑4623223                                                                                                                                          |                                                                                                                                              aaaaGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatg                                                                                                                                    >  2:176163‑M1/1‑138 (MQ=255)     gcgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCggg                                                                                                                                <  6:53094/149‑1 (MQ=255)      cgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCa                                                                                                                                        <  1:14819/140‑1 (MQ=255)      cgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCa                                                                                                                                        >  2:14819/1‑140 (MQ=255)             ttAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGc                                                                                                                                             >  8:9665/1‑128 (MQ=255)             ttAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGc                                                                                                                                             <  7:9665/128‑1 (MQ=255)               aaCGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatgcgggcaactttct                                                                                                                       <  1:176163‑M1/148‑25 (MQ=255)                   gCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatgcgggcaactttctcttc                                                                                                                   >  3:22751‑M1/1‑120 (MQ=255)                          cGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGc                                                                                                           >  2:163217/1‑149 (MQ=255)                               gcgcAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatgcgggcaactttctcttcgatttgccggatt                                                                                                      <  4:22751‑M1/149‑42 (MQ=255)                               gcgcAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGccatc                                                                                                       >  2:156383/1‑148 (MQ=255)                               gcgcAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGccatc                                                                                                       <  6:184760/148‑1 (MQ=255)                                   agcagTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGc                                                                                                  <  1:156383/149‑1 (MQ=255)                                             gCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaa                                                                                                                             >  8:96987‑M2/1‑110 (MQ=255)                                             gCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaa                                                                                                                             <  7:96987‑M2/112‑3 (MQ=255)                                             gCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTcc                                                                                        >  3:7258/1‑149 (MQ=255)                                                       gCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCtt                                                                              >  8:52204/1‑149 (MQ=255)                                                        ccAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTcc                                                                                        >  8:141445/1‑138 (MQ=255)                                                        ccAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTcc                                                                                        <  7:141445/138‑1 (MQ=255)                                                         cAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGACGATAACTCCCGTAGCTCtttt                                                                            >  6:77605/1‑149 (MQ=255)                                                            agaTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTcc                                                                         <  1:163217/149‑1 (MQ=255)                                                              aTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTg                                                                       >  3:50272/1‑149 (MQ=255)                                                                      aTCAGCGAGGCGTTTCGCCACATTGCGCAAGAACTGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttcc                                                                                                >  7:141369‑M2/1‑85 (MQ=255)                                                                      aTCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttcc                                                                                                <  8:141369‑M2/116‑32 (MQ=255)                                                                              ggCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGACGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTcaacc                                                       <  5:77605/149‑1 (MQ=255)                                                                               gCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGaa                                                              <  2:62887/141‑1 (MQ=255)                                                                               gCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGaa                                                              >  1:62887/1‑141 (MQ=255)                                                                                       ccACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCt                                              >  3:21633/1‑149 (MQ=255)                                                                                                gcAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTcc                                     <  4:21633/149‑1 (MQ=255)                                                                                                          ccGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGt                                                                                     >  8:43113/1‑91 (MQ=255)                                                                                                          ccGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGt                                                                                     <  7:43113/91‑1 (MQ=255)                                                                                                          ccGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTgcagc                            <  7:52204/148‑1 (MQ=255)                                                                                                           cGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTgcagca                           >  3:106287/1‑148 (MQ=255)                                                                                                            ggAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatgcgggcaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgat                                                          <  8:141369‑M1/116‑86 (MQ=255)                                                                                                            ggAAAAAATCCGGCAAATCGAAGAGAAAGTTacccgcccatgcgggcaactttctcttcgatttgccggattttttccggcagttcttgcgcaatgtggcgaaacgcctcgctgat                                                          >  7:141369‑M1/1‑31 (MQ=255)                                                                                                                  aaTCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctggcgaccgtttgccagaactgctgcgc                   <  4:22751‑M2/149‑109 (MQ=255)                                                                                                                   aTCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTgcgc                  <  4:7258/149‑1 (MQ=255)                                                                                                                        gCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAgc                                                 <  8:38742/113‑1 (MQ=255)                                                                                                                        gCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAgc                                                 >  7:38742/1‑113 (MQ=255)                                                                                                                               gAAGAGAAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctggcgaccgtttgccagaactgctgcgccagcgggatcgc       >  3:22751‑M2/1‑28 (MQ=255)                                                                                                                                   agaAAGTTGCCCGCATGGGCGGGTaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctggcgaccgtttgccagaactgctgcgccagcgggatcgccgtt   <  1:176163‑M2/148‑125 (MQ=255)                                                                                                                                   agaAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTGCGCGGTACAGGCAGCCTTg  <  1:184101/149‑1 (MQ=255)                                                                                                                                     aaaGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGt                                  <  7:75195/115‑1 (MQ=255)                                                                                                                                     aaaGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGt                                  >  8:75195/1‑115 (MQ=255)                                                                                                                                      aaGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCGCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTGCGCGGTACAGGCAGc      >  3:134861/1‑142 (MQ=255)                                                                                                                                      aaGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCGCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTGCGCGGTACAGGCAGc      <  4:134861/142‑1 (MQ=255)                                                                                                                                         ttacccgcccatgcgggcaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctggcgaccgtttgc                                 <  7:96987‑M1/112‑111 (MQ=255)                                                                                                                                         ttacccgcccatgcgggcaactttctcttcgatttgccggattttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctctggcgaccgtttgc                                 >  8:96987‑M1/1‑2 (MQ=255)                                                                                                                                          |                                                                                                                                              AAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTACCTTACAGCCCCCGCCATCCATGCCGATAACTCCCGTAGCTCTTTTTCCTGTTCCGGGAAGTCAACCAACAGCGCTTCGCACTCCTGTTGCAGCATATCTGCGCGGTACAGGCAGCCTTG  >  NC_000913/4622945‑4623223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.