New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	546854 =	39 (1.030)	6 (0.170)	6/240	2.7	13.8%	coding (175/1668 nt)	fdrA	putative NAD(P)‑binding acyl‑CoA synthetase
	?	NC_000913	546880 =	38 (1.060)					coding (201/1668 nt)	fdrA	putative NAD(P)‑binding acyl‑CoA synthetase
Rejected: Frequency below/above cutoff threshold.

GATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTG  >  NC_000913/546716‑547002                                                                                                                                           |                                                                                                                                                     gATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGaa                                                                                                                                            >  7:150559/1‑149 (MQ=255)              tAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGt                                                                                                                                <  8:150559/148‑1 (MQ=255)                cagcgacgcacctgcgtcaacgcctggctgctgcctgacccctgcgccagttgttttagcgcctcttcaagctgctgcataatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCACGCCGAACGATATTTGCGTgg                                                                                                                              <  6:125647‑M1/25‑1 (MQ=255)                     acgcacctgcgtcaacgcctggctgctgcctgacccctgcgccagttgttttagcgcctcttcaagctgctgcataatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCACGCCGAACGATATTTGCGTGGCAATTc                                                                                                                        >  5:125647‑M1/119‑149 (MQ=255)                           aCGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGc                                                                                                                   >  5:146736/1‑148 (MQ=255)                             gAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCg                                                                                                                  >  6:28981/1‑147 (MQ=255)                               aaaCTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgc                                                                                                              >  8:79445/1‑149 (MQ=255)                                              gAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGAt                                                                                               >  4:33892/1‑149 (MQ=255)                                                     ttGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCa                                                                                         <  5:28981/148‑1 (MQ=255)                                                           atgTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGAtt                                                                                  <  3:33892/149‑1 (MQ=255)                                                                tCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATg                                                                               >  3:136971/1‑147 (MQ=255)                                                                agttgttttagcgcctcttcaagctgctgcataatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCAc                                                                                                                                                  <  6:133386‑M1/5‑1 (MQ=255)                                                                agttgttttagcgcctcttcaagctgctgcataatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCAc                                                                                                                                                  >  5:133386‑M1/76‑80 (MQ=255)                                                                     aaTGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa                                                                                    <  6:151018/137‑1 (MQ=255)                                                                     aaTGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa                                                                                    >  5:151018/1‑137 (MQ=255)                                                                     aaTGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGAtt                                                                                  >  6:187440/1‑139 (MQ=255)                                                                     aaTGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGAtt                                                                                  <  5:187440/139‑1 (MQ=255)                                                                       tgatgGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCtt                                                                      >  5:165416/1‑149 (MQ=255)                                                                       tgatgGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCtt                                                                      <  6:96922/149‑1 (MQ=255)                                                                          tgGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTg                                                                     >  2:141574/1‑147 (MQ=255)                                                                           gggTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTg                                                                     >  8:58180/1‑146 (MQ=255)                                                                                cgcccgccAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGgc                                                              <  6:146736/148‑1 (MQ=255)                                                                                cgcccgccAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGgc                                                              <  1:141574/148‑1 (MQ=255)                                                                                 gcccgccAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGgcgc                                                            >  5:17867/1‑149 (MQ=255)                                                                                   ccgccAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCt                                                           >  8:83533/1‑148 (MQ=255)                                                                                        aaTAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAaac                                                      >  5:165484/1‑148 (MQ=255)                                                                                            aaGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTg                                                 >  2:70809/1‑149 (MQ=255)                                                                                                aatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCACGCCGAACGATATTTGCGTgg                                                                                                                              >  4:95397‑M1/44‑68 (MQ=255)                                                                                                aatcgcctgcgcgatccccgcatccgccgcttcgctacgaattGCCACGCCGAACGATATTTGCGTgg                                                                                                                              <  3:95397‑M1/25‑1 (MQ=255)                                                                                                 ttattaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCa                                            <  4:136971/149‑1 (MQ=255)                                                                                                 ttattaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCa                                            <  7:79445/149‑1 (MQ=255)                                                                                                   attaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAg                                           <  7:83533/148‑1 (MQ=255)                                                                                                    ttaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAggg                                         <  6:165416/149‑1 (MQ=255)                                                                                                    ttaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAggg                                         <  6:17867/149‑1 (MQ=255)                                                                                                              caGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGgcagc                               <  7:58180/149‑1 (MQ=255)                                                                                                               aGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGgcagca                              <  6:165484/149‑1 (MQ=255)                                                                                                                 ccgcatccgccgcttcgctacgaattGCCACGCCGAACGatat                                                                                                                                      <  5:186643‑M1/17‑1 (MQ=255)                                                                                                                 ccgcatccgccgcttcgctacgaattGCCACGCCGAACGatat                                                                                                                                      >  6:186643‑M1/27‑43 (MQ=255)                                                                                                                        gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGt                     >  7:21661/1‑149 (MQ=255)                                                                                                                         cATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAaacaac                                                   <  6:110439/118‑1 (MQ=255)                                                                                                                         cATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAaacaac                                                   >  5:110439/1‑118 (MQ=255)                                                                                                                           tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGgcagc                               <  7:131645/136‑1 (MQ=255)                                                                                                                           tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGgcagc                               >  8:131645/1‑136 (MQ=255)                                                                                                                           tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGa                  >  2:204254/1‑149 (MQ=255)                                                                                                                            gACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGa                                                                                                >  2:7819/1‑70 (MQ=255)                                                                                                                            gACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGa                                                                                                <  1:7819/70‑1 (MQ=255)                                                                                                                                       taaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTc      >  8:22517/1‑149 (MQ=255)                                                                                                                                           GCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTg  >  1:204254‑M1/1‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                     GATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTG  >  NC_000913/546716‑547002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.