New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3805341 =154 (4.070)6 (0.160) 6/250 2.8 3.9% coding (610/798 nt) waaP kinase that phosphorylates core heptose of lipopolysaccharide
?NC_000913 3805362 = 144 (3.870)coding (589/798 nt) waaP kinase that phosphorylates core heptose of lipopolysaccharide
Rejected: Frequency below/above cutoff threshold.

Only 100 of 157 total aligned reads displayed.

TAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCA  >  NC_000913/3805216‑3805505
                                                                                                                                                  |                                                                                                                                               
tAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACtt                                                                                                                                               <  6:173724/149‑1 (MQ=255)
  aaTTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACtttt                                                                                                                                             >  4:145490/1‑149 (MQ=255)
     tCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCa                                                                                                                                          >  1:101343/1‑149 (MQ=255)
         ttCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCAc                                                                                                                                         <  8:149323/146‑1 (MQ=255)
           cAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTAt                                                                                                                                     <  2:101343/148‑1 (MQ=255)
           cAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATc                                                                                                                                    >  1:24266/1‑149 (MQ=255)
            aaGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCt                                                                                                                                   >  1:58665/1‑149 (MQ=255)
                gaCAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGc                                                                                                                               <  3:145490/149‑1 (MQ=255)
                 aCAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCAc                                                                                                                                         <  4:80652/138‑1 (MQ=255)
                 aCAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCAc                                                                                                                                         >  3:80652/1‑138 (MQ=255)
                 aCAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGcc                                                                                                                              >  4:130655/1‑149 (MQ=255)
                     tatTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGAt                                                                                                                          >  8:2611/1‑149 (MQ=255)
                       ttttGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATg                                                                                                                         <  2:58665/148‑1 (MQ=255)
                         ttGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCa                                                                                                                       <  5:130684/148‑1 (MQ=255)
                            cGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCa                                                                                                                                          <  5:14392/126‑1 (MQ=255)
                               aaaGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGa                                                                                                                 >  7:153575/1‑148 (MQ=255)
                                 aGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATaa                                                                                                              >  3:20644/1‑149 (MQ=255)
                                 aGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATaa                                                                                                              >  2:124734/1‑149 (MQ=255)
                                        ccAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAt                                                                                                       <  8:143735/149‑1 (MQ=255)
                                        ccAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAt                                                                                                       >  4:65069/1‑149 (MQ=255)
                                        ccAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACGGAAAt                                                                                                       >  5:163932/1‑149 (MQ=255)
                                         cAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAtt                                                                                                      >  5:175213/1‑149 (MQ=255)
                                          aaaaTAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAttt                                                                                                     >  6:59706/1‑149 (MQ=255)
                                              tAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                 <  4:20644/149‑1 (MQ=255)
                                               aaaCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAAt                                                                                                >  7:140428/1‑149 (MQ=255)
                                                 aCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTc                                                                                              <  4:83257/149‑1 (MQ=255)
                                                   cTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                 <  7:47762/144‑1 (MQ=255)
                                                   cTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                            <  3:130655/149‑1 (MQ=255)
                                                   cTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                            >  1:4008/1‑149 (MQ=255)
                                                   cTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                            <  2:198667/149‑1 (MQ=255)
                                                   cTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                            >  6:119176/1‑149 (MQ=255)
                                                     tCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCt                                                                                          >  1:46652/1‑149 (MQ=255)
                                                     tCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCt                                                                                          >  5:154599/1‑149 (MQ=255)
                                                      cATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATc                                                                                           <  6:163932/147‑1 (MQ=255)
                                                      cATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCtt                                                                                         >  1:161827/1‑149 (MQ=255)
                                                       aTAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTc                                                                                        <  3:65069/149‑1 (MQ=255)
                                                        tAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTcc                                                                                       <  2:24266/149‑1 (MQ=255)
                                                          aaTCGCCAGCTAGCTCTTTGCGGCAGGGCAATATTCATTGATGCGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGc                                                                                                                               <  7:131328/107‑1 (MQ=255)
                                                          aaTCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTccc                                                                                      <  4:30153/148‑1 (MQ=255)
                                                          aaTCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTccc                                                                                      >  3:30153/1‑148 (MQ=255)
                                                            tCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGc                                                                                   <  2:4008/149‑1 (MQ=255)
                                                               ccAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAg                                                                                >  1:190515/1‑149 (MQ=255)
                                                                cAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGt                                                                               <  6:154599/149‑1 (MQ=255)
                                                                 aGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCgg                                                                                    >  5:77374/1‑143 (MQ=255)
                                                                 aGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCgg                                                                                    <  6:77374/143‑1 (MQ=255)
                                                                   atatCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGAt                                                                                                                    <  5:162445/109‑1 (MQ=255)
                                                                   atatCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGAt                                                                                                                    >  6:162445/1‑109 (MQ=255)
                                                                   atatCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAtttt                                                                                                    >  1:199855/1‑125 (MQ=255)
                                                                   atatCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTATTAATTCAt                                                                                            >  4:15742/1‑133 (MQ=255)
                                                                   atatCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTATTAATTCAt                                                                                            <  3:15742/133‑1 (MQ=255)
                                                                     atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGAt                                                                                                                    >  6:49784/1‑107 (MQ=255)
                                                                     atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGAt                                                                                                                    <  5:49784/107‑1 (MQ=255)
                                                                     atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCa                                                                                 <  1:188349/142‑1 (MQ=255)
                                                                     atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCa                                                                                 >  2:188349/1‑142 (MQ=255)
                                                                      tctcTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGa                                                                                                                           >  2:68492/1‑99 (MQ=255)
                                                                      tctcTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGa                                                                                                                           <  1:68492/99‑1 (MQ=255)
                                                                       ctctTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTccc                                                                                      <  1:96578/135‑1 (MQ=255)
                                                                        tctTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGc                                                                        >  6:57420/1‑148 (MQ=255)
                                                                          tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATc                                                                                                                                    >  7:92482/1‑86 (MQ=255)
                                                                          tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCaaa                                                                     >  8:21933/1‑149 (MQ=255)
                                                                            tGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCaaa                                                                     <  2:161827/147‑1 (MQ=255)
                                                                               gTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGaaa                                                                                                        >  5:43765/1‑109 (MQ=255)
                                                                               gTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGaaa                                                                                                        <  6:43765/109‑1 (MQ=255)
                                                                                   tttcagttatcgatctgcatcgggcacagatacgtgcaaaagTATCGCGCCAGCGGCGCGGTAc                                                                                                                                                 >  2:12192‑M1/43‑64 (MQ=255)
                                                                                   ggCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGAt                                                                                                                <  2:185881/97‑1 (MQ=255)
                                                                                    gCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCa                                                                                 <  1:103399/127‑1 (MQ=255)
                                                                                      cAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATaa                                                                                                              <  5:66321/96‑1 (MQ=255)
                                                                                         tatTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTgg                                                      >  2:152255/1‑149 (MQ=255)
                                                                                           ttCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGc                                                     <  5:57420/148‑1 (MQ=255)
                                                                                                 gatgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGt                                               <  8:81756/148‑1 (MQ=255)
                                                                                                   tgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAAt                                                                    <  1:151539/125‑1 (MQ=255)
                                                                                                       taaTATAAACGATTCAGGTCTTTATCGTGCCAGGGGCGCGGTACTTTTGCAAGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCGCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCTAAt                                                 <  2:69999/139‑1 (MQ=255)
                                                                                                        aaTATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTcg                                       >  4:74402/1‑149 (MQ=255)
                                                                                                            taAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGt                                   <  2:46652/149‑1 (MQ=255)
                                                                                                              aaCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGa                                 >  3:25780/1‑149 (MQ=255)
                                                                                                                ccAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                            <  8:68842/88‑1 (MQ=255)
                                                                                                                  aaTCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTa                             >  1:190819/1‑149 (MQ=255)
                                                                                                                    tCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCCTCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTtctc                           >  8:51208/1‑149 (MQ=255)
                                                                                                                    tCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATg                                                >  2:14007/1‑128 (MQ=255)
                                                                                                                    tCAGGTCTTGATCGCGCCAGCGGCGCGGTACTTTTGCACGTAGCTGTGCCCGATGCAGATCGATAACTGACATTTTTAATTCCTCTTCCCGGCCAGTAAATGGCAAAGGAAGCAAAAAGTGGCAAATGTCACAGGCGCGGTGATTTATc                           <  7:51208/149‑1 (MQ=255)
                                                                                                                    gtgcaaaagtaccgcgccgctggcgcgataCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                 <  2:57665‑M2/49‑1 (MQ=255)
                                                                                                                    gtgcaaaagtaccgcgccgctggcgcgataCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                 >  1:57665‑M2/31‑79 (MQ=255)
                                                                                                                      aGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc                          <  5:59706/148‑1 (MQ=255)
                                                                                                                      aGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc                          <  8:136321/148‑1 (MQ=255)
                                                                                                                      aGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc                          <  7:21933/148‑1 (MQ=255)
                                                                                                                       ggTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGAt                                                                                                                <  7:116169/61‑1 (MQ=255)
                                                                                                                       ggTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACa                                           >  2:137348/1‑130 (MQ=255)
                                                                                                                       ggTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACa                                           <  1:137348/130‑1 (MQ=255)
                                                                                                                           tttATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAg                    >  5:86609/1‑149 (MQ=255)
                                                                                                                            gtaccgcgccgctggcgcgataCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGaaa                                                                                                        <  1:12192‑M2/42‑1 (MQ=255)
                                                                                                                              ATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTAt                 <  6:32939‑M1/149‑1 (MQ=255)
                                                                                                                                  cgccgctggcgcggtaCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCa              >  6:78414‑M2/17‑148 (MQ=255)
                                                                                                                                       gcggcgCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaa                                                   <  6:178188/106‑1 (MQ=255)
                                                                                                                                       gcggcgCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaa                                                   >  5:178188/1‑106 (MQ=255)
                                                                                                                                       gcggcgCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTAc        <  2:190819/149‑1 (MQ=255)
                                                                                                                                         ggcgCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACg       >  5:20465/1‑148 (MQ=255)
                                                                                                                                            gcgGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTaa                                             >  8:110621/1‑107 (MQ=255)
                                                                                                                                             cgGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCa  >  2:109955/1‑149 (MQ=255)
                                                                                                                                                 aCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTa                  >  3:1001‑M2/2‑129 (MQ=255)
                                                                                                                                                 aCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTa                  <  4:1001‑M2/128‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
TAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCA  >  NC_000913/3805216‑3805505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.