New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3058431	38 (0.950)	5 (0.130)	5/252	4.4	12.5%	intergenic (‑21/+235)	serA/rpiA	D‑3‑phosphoglycerate dehydrogenase/ribose 5‑phosphate isomerase, constitutive
	?	NC_000913	= 3058468	34 (0.890)					intergenic (‑58/+198)	serA/rpiA	D‑3‑phosphoglycerate dehydrogenase/ribose 5‑phosphate isomerase, constitutive
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGCCTTTGTGAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTGGTTTAGAGGATTTATT  >  NC_000913/3058289‑3058572                                                                                                                                               |                                                                                                                                              gcgcCTTTGTGAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAAtgtt                                                                                                                                         <  1:134490/149‑1 (MQ=255) gcgcCTTTGTGAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAAtgtt                                                                                                                                         <  3:55467/149‑1 (MQ=255)   gcCTTTGTGAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAAtgttgt                                                                                                                                       >  2:108675/1‑149 (MQ=255)         gtgAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCAATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGc                                                                                                                                   >  1:175552/1‑147 (MQ=255)         gtgAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCAATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGc                                                                                                                                   <  2:175552/147‑1 (MQ=255)             aaTTCGATGTTGGTGTTACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCTCGCCTTCTACCAGCAGAAAGTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGAttt                                                                                                                             <  5:70316/149‑1 (MQ=255)                              aCCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAAc                                                                                                             <  1:108675/148‑1 (MQ=255)                              aCCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACa                                                                                                            >  1:205352/1‑149 (MQ=255)                                    tGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCa                                                                                                       >  2:192281/1‑148 (MQ=255)                                     gCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGc                                                                                                                                   <  1:162368/119‑1 (MQ=255)                                     gCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGc                                                                                                                                   >  2:162368/1‑119 (MQ=255)                                      cACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAAtgttgt                                                                                                                                       <  7:87916/114‑1 (MQ=255)                                      cACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCaaa                                                                                                     >  7:92346/1‑148 (MQ=255)                                      cACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTACTCCAGCGATACCTTTGCCATTAACCAAAACCTGTCTATTGAAAtgatgt                                                                                                                                       >  8:87916/1‑114 (MQ=255)                                         gAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTACATCCGCCTTTCAACATATCaaaaaa                                                                                                  >  8:91646/1‑148 (MQ=255)                                           aGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAaataa                                                                                               <  8:92346/149‑1 (MQ=255)                                               tttCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATAtt                                                                                           >  1:91673/1‑149 (MQ=255)                                                                tGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGtt                                                                          >  2:24643/1‑149 (MQ=255)                                                                  cACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGttt                                                                         <  2:91673/148‑1 (MQ=255)                                                                  cACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTg                                                                        >  7:80549/1‑149 (MQ=255)                                                                               agcagAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTACATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTg                                                           <  7:91646/149‑1 (MQ=255)                                                                                gcagAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGtt                                                            >  6:178959/1‑147 (MQ=255)                                                                                gcagAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGa                                                          <  4:164552/149‑1 (MQ=255)                                                                                      aCTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAat                                                    <  1:192281/149‑1 (MQ=255)                                                                                          aaTCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAatat                                                  <  8:80549/147‑1 (MQ=255)                                                                                           aTCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCAc                                               <  2:205352/149‑1 (MQ=255)                                                                                           aTCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCAc                                               <  5:178959/149‑1 (MQ=255)                                                                                              ttGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGc                                             >  6:16842/1‑148 (MQ=255)                                                                                                gTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCa                                            <  5:16842/147‑1 (MQ=255)                                                                                                   tttCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAgg                                        >  8:65738/1‑148 (MQ=255)                                                                                                         cAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCt                                 >  1:205778/1‑149 (MQ=255)                                                                                                                      gCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCaaa                                                                                                     <  7:16658/68‑1 (MQ=255)                                                                                                                      gCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCaaa                                                                                                     >  8:16658/1‑68 (MQ=255)                                                                                                                        cATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCTCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTg                  <  1:24643/149‑1 (MQ=255)                                                                                                                        cATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTg                  <  7:65738/149‑1 (MQ=255)                                                                                                                             aCCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAat                        <  7:17256/138‑1 (MQ=255)                                                                                                                                 aaTCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTGGTTTagag          >  8:78605/1‑148 (MQ=255)                                                                                                                                          ttttGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTGGTTTAGAGGatttatt  >  3:94779/1‑147 (MQ=255)                                                                                                                                               |                                                                                                                                              GCGCCTTTGTGAAATTCGATGTTGGTGTAACCAGCTGCACGAAGGCTTTCCAGCGCCTTTTGGTGCACGCCTTCTACCAGCAGAAACTTAATCTTGTCTTTCTCCAGCGATACCTTTGCCATTTACCCAATCCTGTCTTTTGAAATGTTGTGTGCGGATTTGCATCCGCCTTTCAACATATCAAAAAATAATATTGCGGCAATATGAACGTTTGCGTCGCGATGTTGAGGAAATATCACGCAAAGGTAATTCTTGGATGAATATGCTGGTTTAGAGGATTTATT  >  NC_000913/3058289‑3058572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.