Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 458,790 IS186 (–) +6 bp :: Δ1 bp 51.6% intergenic (+90/‑93) clpX → / → lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458790 =22 (0.350)26 (0.390) 25/256 NT 53.0% intergenic (+90/‑98) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608008 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 45879523 (0.370)22 (0.330) 21/254 NT 47.7% intergenic (+95/‑93) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 = 609351 NA (NA)noncoding (1345/1345 nt) IS186 repeat region

Only 100 of 112 total aligned reads displayed.

AAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGT  >  NC_000913/458647‑458943
                                                                                                                                                    |                                                                                                                                                    
ccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACa                                                                                                                                                      <  6:60832‑M1/6‑1 (MQ=255)
         cgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAAACATCCCCAtata                                                                                                                                            >  1:349317‑M1/135‑149 (MQ=255)
         cTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataag                                                                                                                                             <  4:348272‑M1/149‑10 (MQ=255)
         cTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataa                                                                                                                                              <  1:114299‑M1/148‑9 (MQ=255)
            aTTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagc                                                                                                                                            <  2:376376‑M1/147‑11 (MQ=255)
             gtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACt                                                                                                                                          <  4:311859‑M1/18‑1 (MQ=255)
                        tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGtt                                                                                                                              >  3:296531‑M1/120‑149 (MQ=255)
                        tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGtt                                                                                                                              >  8:147820‑M1/120‑149 (MQ=255)
                        agttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGt                                                                                                                               <  2:161526‑M1/29‑1 (MQ=255)
                          ttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTaa                                                                                                                            <  2:223079‑M1/32‑1 (MQ=255)
                            aaGCGCAACTGGCATCTGGTGAATAATTAAAGATTCCCATACAATTAGTTAACCAAAAAGTGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtg                                                                                                                          >  4:274612‑M2/1‑121 (MQ=255)
                             ttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTaa                                                                                                                            <  5:96334‑M1/32‑1 (MQ=255)
                               cgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGa                                                                                                                        >  3:327333‑M1/113‑148 (MQ=255)
                                tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttatcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATg                                                                                                                      >  8:140917‑M1/112‑149 (MQ=255)
                                gcAACAGGCATCTTGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATg                                                                                                                      <  6:296354/149‑1 (MQ=255)
                                       gCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                               <  2:271459/149‑1 (MQ=255)
                                       gCATATGGTGAATAAATAACCATTCCCATACAATTAGTTAACCAAAAAGTGGGGATTTAATCTCCCCTTAAATTTTTCCTCTATTCTCGGCGTTCAATGTGGGGCAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                               <  2:359391/149‑1 (MQ=255)
                                        cATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCATGAAg                                                                                                              <  8:36061/149‑1 (MQ=255)
                                        acagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                               >  5:47771‑M1/104‑147 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACa                                                                                                                                                      <  3:21718/108‑1 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACa                                                                                                                                                      >  4:21718/1‑108 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctga                                                                                                             <  2:262789‑M2/149‑42 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaa                                                                                                                                  <  2:174908‑M1/128‑21 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaa                                                                                                                                  >  1:174908‑M1/1‑108 (MQ=255)
                                         aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGAAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAg                                                                                                              >  3:156343/1‑148 (MQ=255)
                                          agcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGca                                                                                                            <  6:112760‑M1/48‑1 (MQ=255)
                                          agcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagagcttatgggGAAACATCCCCATATACTGACGAACATGTTAATAGATGGCGTGAAGca                                                                                                            <  5:72096‑M1/48‑1 (MQ=255)
                                            tGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatat                                                                                                          <  4:51825‑M2/149‑45 (MQ=255)
                                            cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacaaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                                                                 <  5:29081‑M1/43‑1 (MQ=255)
                                            cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacaaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                                                                 >  6:29081‑M1/100‑142 (MQ=255)
                                               tGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgat                                                                                                       <  7:99326‑M2/149‑48 (MQ=255)
                                               acaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATa                                                                                                                          <  6:241101‑M1/34‑1 (MQ=255)
                                               acaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATa                                                                                                                          >  5:241101‑M1/97‑130 (MQ=255)
                                                 ccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt                                                                                                     >  1:161526‑M1/95‑149 (MQ=255)
                                                 aaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt                                                                                                     <  7:117041‑M1/55‑1 (MQ=255)
                                                   taatTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCGCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAAGGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctc                                                                                                   >  2:268063‑M1/1‑98 (MQ=255)
                                                   agaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt                                                                                                   <  6:20112‑M1/57‑1 (MQ=255)
                                                     cgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa                                                                                                 >  7:89788‑M1/91‑149 (MQ=255)
                                                        tgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt                                                                                              <  3:276219‑M1/61‑1 (MQ=255)
                                                             accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                               >  8:152219‑M1/83‑127 (MQ=255)
                                                             accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                               <  7:152219‑M1/45‑1 (MQ=255)
                                                              ccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAc                                                                                        >  1:223079‑M1/82‑149 (MQ=255)
                                                               cccATACAATTAGTTACCCAAATAGGTGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt                                                                                        <  2:291111‑M1/148‑63 (MQ=255)
                                                               cagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc                                                                                       >  6:96334‑M1/81‑149 (MQ=255)
                                                                caaTACAATTAGTTAACCAAAAAGGGGGGATAATATCTCCCCTTTAATTATTCCTCTATACTCGGCGTTTAATGTGGGGGAAAAATACCCATATACTGACGTACATGTTAATAGATAGCCTGAAGCCCAGTAGTGTCATCTGATTAACt                                                                                      >  3:75189/3‑149 (MQ=255)
                                                                  cgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTgg                                                                                    >  3:311859‑M1/78‑149 (MQ=255)
                                                                  aTACAAATAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcacataagcgctaactaaagggttgaaccatctgaagaaagcgacgcatcggtgcctcgttaaca                                                                                    >  8:228458‑M1/1‑83 (MQ=255)
                                                                    atcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGGTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg                                                                                  <  6:372751‑M1/74‑1 (MQ=255)
                                                                      aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactct                                                                                <  7:19651‑M2/149‑71 (MQ=255)
                                                                        tgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                                                              <  3:345802‑M1/78‑1 (MQ=255)
                                                                               aCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctga                                                                                                                  >  6:314200‑M1/1‑70 (MQ=255)
                                                                               aCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctga                                                                                                                  <  5:314200‑M1/106‑37 (MQ=255)
                                                                                ccAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaacc                                                                                                                        <  8:399128‑M1/99‑31 (MQ=255)
                                                                                 cAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACt                                                                       >  5:342322/1‑147 (MQ=255)
                                                                                 cAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa                                                                     <  5:242549/149‑1 (MQ=255)
                                                                                   aaaaGGTGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga                                                                   <  4:199304/149‑1 (MQ=255)
                                                                                   aaaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGAAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga                                                                   <  4:156343/149‑1 (MQ=255)
                                                                                     tcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcgtatgggGAAACTTCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAActaagtga                                                                 >  6:330535‑M1/59‑146 (MQ=255)
                                                                                     aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga                                                                 <  8:143404/149‑1 (MQ=255)
                                                                                     aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga                                                                   >  7:143404/1‑147 (MQ=255)
                                                                                       ggggggAAGTAATCACCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAAAGTGGGGCAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaat                                                               <  7:378396‑M1/149‑88 (MQ=255)
                                                                                        gggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagagag                                                              >  4:248530/1‑149 (MQ=255)
                                                                                          acgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGct                                                            >  5:60832‑M1/54‑149 (MQ=255)
                                                                                           ggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcg                                                           >  8:29913‑M1/1‑58 (MQ=255)
                                                                                            gttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggCAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa                                                         >  2:91477‑M1/52‑149 (MQ=255)
                                                                                             aTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCACATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa                                                         <  3:36343/149‑1 (MQ=255)
                                                                                              ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTAt                                                        >  1:396574/1‑149 (MQ=255)
                                                                                                  gtcgcattcttcagattgttcaacccttaagttagcgcttatgggAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATc                                                   >  8:273772‑M1/46‑149 (MQ=255)
                                                                                                     gcattcttcagatggttcaaccctaaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATcc                                                  >  8:117041‑M1/43‑148 (MQ=255)
                                                                                                       cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctg                                               >  7:114204‑M1/1‑46 (MQ=255)
                                                                                                       cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctg                                               >  7:319406‑M1/1‑46 (MQ=255)
                                                                                                       cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                                                <  7:228458‑M1/148‑103 (MQ=255)
                                                                                                       cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTTGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                               <  6:342322/149‑1 (MQ=255)
                                                                                                          tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCg                                            >  2:112811/1‑149 (MQ=255)
                                                                                                          cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc                                             >  5:112760‑M1/38‑148 (MQ=255)
                                                                                                             gtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTc                                         <  5:94857‑M1/115‑1 (MQ=255)
                                                                                                             aaTTTTTCCTCTATTCTCGGCGTTGAATGGGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCggt                                          <  1:359487/148‑3 (MQ=255)
                                                                                                              agatggttcaaccctttagttagcgcttatggtGAAACATCCCCATATACTGACGTACATGTTAATAGATTGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt                                        >  6:72096‑M1/34‑149 (MQ=255)
                                                                                                                    cacaacccttaagttagcgcttatgggAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCa                                 >  4:276219‑M1/28‑149 (MQ=255)
                                                                                                                     ctctATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaag                                  <  1:314054‑M2/148‑117 (MQ=255)
                                                                                                                        tATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcc                                <  1:268063‑M1/147‑119 (MQ=255)
                                                                                                                        acccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTg                              >  6:94857‑M1/24‑149 (MQ=255)
                                                                                                                          ttCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTg                              <  2:176286/147‑1 (MQ=255)
                                                                                                                           cttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                               >  8:130665‑M1/21‑129 (MQ=255)
                                                                                                                           cttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                               <  7:130665‑M1/109‑1 (MQ=255)
                                                                                                                               ggCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatgg                       >  3:35288‑M1/1‑22 (MQ=255)
                                                                                                                               ggCCTTGACTGTGGGGGAAACAtcccattagcgctcacttaagggttgatccatctgaccaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatg                        <  6:79‑M1/148‑127 (MQ=255)
                                                                                                                                gCGTTGAATGTGGGGGAAACATCCGCATTTACTGACTTACATGTTAATAGATGGAGTGAAGCAGAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATcacc                      <  4:75189/149‑1 (MQ=255)
                                                                                                                                  gTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggata                         <  1:13909‑M2/144‑126 (MQ=255)
                                                                                                                                  gTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggata                         >  2:13909‑M2/1‑19 (MQ=255)
                                                                                                                                        tgtgGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGcc              >  7:41469/1‑149 (MQ=255)
                                                                                                                                          tgGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatatgggtaagcccgacgaactggatacttcggcacgtaa            >  1:262789‑M2/1‑11 (MQ=255)
                                                                                                                                          tgGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCg             <  3:248530/148‑1 (MQ=255)
                                                                                                                                          tatggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGc            <  8:208088‑M1/144‑1 (MQ=255)
                                                                                                                                          atgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGc            <  8:259762‑M1/144‑1 (MQ=255)
                                                                                                                                                aaaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTAGGCATCCTGAGCGTGCTGATCGCTTTGAATTCCCCGTATTGCCGCTgcgg       >  2:257449/1‑147 (MQ=255)
                                                                                                                                                aaaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCGCTATGAGTCCTGAGCGGTCTGAAAGACTTGAAATCCCCGTATTTCCGCTgcgc       >  5:4649/1‑148 (MQ=255)
                                                                                                                                                 aaCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccata                                                 <  1:109330‑M2/105‑102 (MQ=255)
                                                                                                                                                 aaCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccata                                                 >  2:109330‑M2/1‑4 (MQ=255)
                                                                                                                                                    atcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatga  >  1:242024‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGT  >  NC_000913/458647‑458943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.