| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 579,146 | A→G | 100% | intergenic (‑253/+38) | borD ← / ← ybcV | DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 579,146 | 0 | A | G | 98.9% | 11595.1 / 25.6 | 4064 | intergenic (‑253/+38) | borD/ybcV | DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (26/21); new base G (2043/1947); total (2083/1981) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 4065 total aligned reads displayed.
GTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCG > NC_000913/578999‑579291 | gTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTTTTCCAACGcc > 7:370820/1‑149 (MQ=255)gTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGcc > 7:198186/1‑149 (MQ=255) tcAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCgg < 3:75010/147‑1 (MQ=255) tcAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGt > 5:52364/2‑149 (MQ=255) gATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGacac > 4:208572/1‑149 (MQ=255) aaTCGTCATTGTATTCCCGGATTAACTATGTCCACAGGCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGTAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGgaa < 3:356695/149‑1 (MQ=255) aaTCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGATCTTCTCTGCGGGAGTGTCGGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGGATTGCATTATGCCAACGCCCCGGTGCTGACACGgaa < 6:135765/149‑1 (MQ=255) aaTCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGATTAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTTCATTATGCCAACGCCCCGGTGCTGACACGgaa < 2:121941/149‑1 (MQ=255) aaTCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGGTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGgaa < 2:364457/149‑1 (MQ=255) tCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAAc > 4:50158/1‑149 (MQ=255) tCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAAc < 2:256094/149‑1 (MQ=255) ttGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCg > 1:182349/1‑148 (MQ=255) tGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGgaagaa < 3:204736/143‑1 (MQ=255) gTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGAc > 4:32965/1‑149 (MQ=255) ttCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGgaa < 5:299015/136‑1 (MQ=255) ccGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATg < 1:61303/149‑1 (MQ=255) ccGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGGCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATg < 2:176557/149‑1 (MQ=255) cGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGa > 6:37139/1‑149 (MQ=255) cGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGa > 8:383998/1‑149 (MQ=255) tttaCTATGTCCACAGCCCTGACGGGGAACTTCTCTTCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTa < 7:168726/146‑1 (MQ=255) ttAACTATGTCCACAGCCCTGACGGGTAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTa < 4:27299/149‑1 (MQ=255) aCTATGTCCACGGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGc < 8:322090/148‑1 (MQ=255) cTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGt < 4:7705/149‑1 (MQ=255) cTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGt < 6:56823/149‑1 (MQ=255) tATGTCCACAGCCCTGACGCGGAACTTCTCTGCGGGAGTGTCCGTGAATAATTAAAAA‑GATGCACACAGGGTTTAGCGCGTACACTAATTGCATTATGCCAACGCCCCGCTGCTCACACGGAAGAAACCCGACAATATCATTAAGCGTg > 8:124923/1‑149 (MQ=255) tCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGACAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGa > 5:104101/1‑147 (MQ=255) ccACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGa > 6:272080/1‑146 (MQ=255) caccGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAACCGATGCACACAGGGTTTAGCGCGTAAACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGa > 7:275794/1‑145 (MQ=255) cacaGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGCAACCGGACGTTATGATTTAGCGTGGa > 1:306678/1‑145 (MQ=255) acaGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACAAGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGAt < 8:353692/149‑1 (MQ=255) aGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGAttt < 5:279334/149‑1 (MQ=255) cccTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTtgt > 7:255462/1‑149 (MQ=255) ccTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGCAACCGGACGTTATGATTTAGCGTGGAAAGATTtgtg < 1:280830/149‑1 (MQ=255) ccTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGAGGAAAGATTtgtg < 8:104275/149‑1 (MQ=255) aCGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTa < 1:331043/147‑1 (MQ=255) aCGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAgt < 1:360402/149‑1 (MQ=255) ggggAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAgtgt > 2:202621/1‑149 (MQ=255) gggAACTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGtt < 8:182297/149‑1 (MQ=255) aaCTTCTCTGCGGGAGTGTCCGGTAATAATT‑AAAACTCTGCACACAGGGATTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATCATTTAGCGCGGAAAGATTTGTGTAGTGTTCTg < 6:220221/149‑1 (MQ=255) aCTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACAAGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGtt > 6:19148/1‑145 (MQ=255) cTTCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGaa > 1:157773/1‑149 (MQ=255) ttCTCTGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAAt > 7:137665/1‑149 (MQ=255) ctctGCGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACCCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTAGAAAGATTTGTGTAGTGTTCTGAATGc > 4:301910/1‑149 (MQ=255) tctGCGGGAGTGTGCGGGAATTATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCATACGCCCAGGTGATGAACCGGAAGAAACCGGACGGTATGATTTAGCGTGGACAGATTTGGGTACTGTTCTGAATGct > 2:93274/1‑149 (MQ=255) cGGGAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCa < 3:320823/149‑1 (MQ=255) gggTGTGTCCGGTAATAA‑TAAAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGTAAAGATTTGTGTAGTGTTCTGAATGCTCTCAg < 6:338867/149‑1 (MQ=255) gggAGTGTCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACCCGTATTGCATTATGCCAACGCCCCGGTGCTGCCACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAg > 3:291920/1‑149 (MQ=255) gAGTGTCCGGTAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTa < 8:295617/149‑1 (MQ=255) gtCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGACGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATa < 6:294344/149‑1 (MQ=255) gtCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATa < 2:228511/149‑1 (MQ=255) tCCTGGAATTATT‑AAAACGATGCACACAGGGTTTAGCTCGTACACGTATTGCTTTATGCCAACGCCCCGGTGCTGACACGGAAGAAACAGGACGTTATGATTTAGCGTGGAAAGATATGTGTAGTGTTCTGAATGCTCTCAGTAAATa < 5:182043/148‑1 (MQ=255) tCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCagtaagta < 3:177595/148‑1 (MQ=255) tCCGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAg > 4:109078/1‑149 (MQ=255) ccGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCCCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGGTATGATTTAGCGTGGAAAGAGTTGTGTAGTGTTCTGAATGCTCGCAGTAAATAg > 2:64621/1‑148 (MQ=255) cGGGAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGt < 4:357924/148‑1 (MQ=255) gggAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTaa < 7:325236/149‑1 (MQ=255) gggAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTaa < 7:69276/149‑1 (MQ=255) ggAATAATT‑AAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTCTGCCAACGCCCCTGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAAt < 2:311949/149‑1 (MQ=255) aattaaaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCg > 2:149418/5‑98 (MQ=255) attaaaaCGATGCACACAGGGGTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGATATGTTTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCGCTCAGTAAATAGTAATGAATTa < 2:340262/146‑1 (MQ=37) aaaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATc > 7:296611/1‑148 (MQ=255) aaaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATc > 3:261590/1‑148 (MQ=255) aaaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATc > 5:79544/1‑148 (MQ=255) aaaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATc < 4:242811/148‑1 (MQ=255) aaaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTa < 3:14593/137‑1 (MQ=255) aaCGATGCCCACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCaaa < 6:108925/149‑1 (MQ=255) aaCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCa > 5:154428/1‑147 (MQ=255) aCGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAATAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAg < 5:366301/149‑1 (MQ=255) cGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAgg > 5:338202/1‑149 (MQ=255) aTGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAg > 8:7435/1‑123 (MQ=255) aTGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGta < 1:101764/149‑1 (MQ=255) aTGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGta > 8:48182/1‑149 (MQ=255) cacacaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAACCCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAg < 6:78953/149‑1 (MQ=255) cacacaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAg < 8:240462/149‑1 (MQ=255) acacaGGTTTTAGCGCGTACACGTAATGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCt < 7:10947/107‑1 (MQ=255) acacaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAg > 7:223411/1‑148 (MQ=255) acacaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAg > 5:252168/1‑148 (MQ=255) acaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATa < 3:49379/123‑1 (MQ=255) acaGGGTTTAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTaa > 8:155087/1‑149 (MQ=255) tttAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTg > 1:215996/1‑78 (MQ=255) tttAGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCtt > 4:167231/1‑149 (MQ=255) aGCGCGTACACGTATTGCATTATGCCAACGCCCCGGTGCGGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCtttt < 5:207234/148‑1 (MQ=255) gcgcGTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTa < 1:244847/148‑1 (MQ=255) gcgTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGt < 2:38971/149‑1 (MQ=255) cgTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGtt < 1:94490/149‑1 (MQ=255) gTACACTTATTGCATTATGCGAACGCCGCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGTAAAGATTTGTGTAGTGTTATGAATGGTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTc < 5:229815/149‑1 (MQ=21) gTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGtt > 7:40360/1‑148 (MQ=255) gTACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTc < 2:287177/149‑1 (MQ=255) acacGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTcat > 8:213129/1‑147 (MQ=255) cacgtattgcattATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTcat < 6:165278/145‑3 (MQ=255) acgtattgcattATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTAt > 1:389211/3‑117 (MQ=255) attgcattATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCtttt > 7:349625/1‑135 (MQ=255) attatGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTa > 3:113614/1‑107 (MQ=255) attatGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTAt < 6:247583/132‑1 (MQ=255) atGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTaac < 4:189776/148‑2 (MQ=255) cAACGCCCCGTGGCTTACCCCGAAGAAACCGGACGTTCTGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGATTTCTCTCATTAAATAGTAATGAATTACCATATGTTTAGTAATATCTTTTATGTTCATGGAGATTTGAAACCCATc < 4:131238/149‑1 (MQ=255) cAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTTGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATc < 1:128675/149‑1 (MQ=255) cAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATc < 8:268613/149‑1 (MQ=255) aaCGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAg < 3:23046/105‑1 (MQ=255) aaCGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTAt < 5:127439/124‑1 (MQ=255) | GTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCG > NC_000913/578999‑579291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |