New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3383284 =	118 (1.140)	4 (0.040)	4/262	10.6	3.4%	intergenic (+17/+46)	degS/mdh	serine endoprotease, periplasmic/malate dehydrogenase, NAD(P)‑binding
	?	NC_000913	3383314 =	118 (1.240)					intergenic (+47/+16)	degS/mdh	serine endoprotease, periplasmic/malate dehydrogenase, NAD(P)‑binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAGAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3383442‑3383284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggttttttATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCA  >  NC_000913/3383314‑3383460                                                                                                                                                                                                                                                                                                                    AAGAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACT                                                                                                                                                               >  4:77353/1‑149   GAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCC                                                                                                                                                             >  3:113250/1‑149   GAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCC                                                                                                                                                             >  3:95073/1‑149   GAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATAAGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAGAACCGGAGAACAGACTac                                                                                                                                                             >  7:278728/1‑147      CGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGT                                                                                                                                                          >  2:314001/1‑149        TAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTT                                                                                                                                                        >  2:123892/1‑149        TAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTT                                                                                                                                                        >  6:115827/1‑149        TAAATCTATCGCTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCAGCGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGCAGCACCGACTCCGGTTT                                                                                                                                                        >  6:227715/1‑149         AAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAATGTATGCTGGCTACGCTGAAGAAAGACATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTT                                                                                                                                                       <  3:221314/149‑1          AATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTT                                                                                                                                                       <  6:224390/148‑1          AATCTATCGGTACCCTGAGCGCATTTGAACACAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTT                                                                                                                                                       <  8:95528/148‑1           ATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT                                                                                                                                                     <  5:115827/149‑1           ATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT                                                                                                                                                     <  5:348185/149‑1           ATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT                                                                                                                                                     >  5:242321/1‑149           ATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT                                                                                                                                                     <  2:215807/149‑1           ATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT                                                                                                                                                     <  2:110400/149‑1                                                                                             GAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTTATTATGCGGTAATCAATTACTTATTTTCGAACTCTTCGCCCAGGGCGATATCTTTCTTAAGCGTATCCAGAATACATTCCAG                                                                   >  3:106465/1‑149                                                                                                                                 TAAAAAACCGGAGCACAGACTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGCACTCTTCGCCCAGGGCGATATCTTTCTTCAGC                                                                                       >  1:289588/1‑93                                                                                                                                 TAAAAAACCGGAGCACAGACTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGC                                                                                       <  2:289588/93‑1                                                                                                                                   AAAAACCGGAGCACAGACTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATT                             >  5:426233/1‑149                                                                                                                                                    CTCCGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCG            >  6:137694/1‑149                                                                                                                                                       CGGTTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCACAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTT         >  8:144640/1‑149                                                                                                                                                          TTTTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTA      <  2:369209/149‑1                                                                                                                                                            TTTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACC    >  6:178925/1‑149                                                                                                                                                            TTTTATTATCCGCTAATCAAATACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCAAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTCCCGATAGATTTACGCTCTTCCACGCCGTTTTTACC    >  6:276597/1‑149                                                                                                                                                             TTTATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACC    >  3:85751/1‑148                                                                                                                                                               TATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCA  <  7:177013/148‑1                                                                                                                                                                                                                                                                                                                    AAGAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAATTGATTAGCGGATAATAAAAAACCGGAGCACAGACTCCGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3383442‑3383284 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggttttttATTATCCGCTAATCAATTACTTATTAACGAACTCTTCGCCCAGGGCGATATCTTTCTTCAGCGTATCCAGCATACCTTCCAGCGCGTTCTGTTCAAATGCGCTCAGGGTACCGATAGATTTACGCTCTTCCACGCCGTTTTTACCCA  >  NC_000913/3383314‑3383460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.