New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3514835 =	40 (1.050)	4 (0.110)	4/252	4.5	10.0%	coding (225/678 nt)	rpe	D‑ribulose‑5‑phosphate 3‑epimerase
	?	NC_000913	3514868 =	34 (0.940)					coding (192/678 nt)	rpe	D‑ribulose‑5‑phosphate 3‑epimerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCGCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTGGTTATCCATGA  >  NC_000913/3514698‑3514950                                                                                                                                          |                                                                                                                    gtCGCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGttt                                                                                                          >  5:79935/1‑149 (MQ=255)    gCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCAc                                                                                                       >  5:11507/1‑149 (MQ=255)    gCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCAc                                                                                                       >  2:93643/1‑149 (MQ=255)    gCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCAc                                                                                                       >  2:90865/1‑149 (MQ=255)    gCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCAc                                                                                                       >  7:95993/1‑149 (MQ=255)                 ccAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTAc                                                                                           <  6:11507/148‑1 (MQ=255)                   aGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGATGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTc                                                                                        <  4:48811/149‑1 (MQ=255)                      cccGCTTAACAGCCAATTTCTTTAATCAGTTGCAGCGTGCGCTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGAt                                                                                     <  8:114327/149‑1 (MQ=255)                       ccGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGa                                                                                      >  7:18009/1‑147 (MQ=255)                       ccGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGa                                                                                      >  5:60684/1‑147 (MQ=255)                             tACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGc                                                                               <  1:93643/148‑1 (MQ=255)                             tACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGc                                                                               <  1:90865/148‑1 (MQ=255)                                aGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGt                                                                            >  3:157064/1‑148 (MQ=255)                                 gCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACAAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACAATCAGGTGTACGTCGATAGGGGCGGTaa                                                                          >  3:52132/1‑149 (MQ=255)                                      tttCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCa                                                                     >  5:128347/1‑149 (MQ=255)                                            tAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTa                                                               >  3:95684/1‑149 (MQ=255)                                              aTCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACg                                                             >  1:105223/1‑149 (MQ=255)                                                 aGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCaa                                                          <  5:11675/149‑1 (MQ=255)                                                  gTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAg                                                         <  6:60684/149‑1 (MQ=255)                                                  gTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAg                                                         <  4:95684/149‑1 (MQ=255)                                                                  aaCATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTg                                         <  2:105223/149‑1 (MQ=255)                                                                           ggAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATc                                 <  8:18009/148‑1 (MQ=255)                                                                            gAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATa                                                                   <  4:48230/113‑1 (MQ=255)                                                                            gAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATa                                                                   >  3:48230/1‑113 (MQ=255)                                                                                     ggATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTgg                       >  5:129877/1‑148 (MQ=255)                                                                                      gATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTggg                      >  6:21133/1‑148 (MQ=255)                                                                                      gATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTgg                       <  2:63005/147‑1 (MQ=255)                                                                                      gATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGa                     <  4:157064/149‑1 (MQ=255)                                                                                        tGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGaa                    >  1:134477/1‑148 (MQ=255)                                                                                         gAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATATACGGGTTTAACAATCAGTTGTAAGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACa                  >  1:105729/1‑149 (MQ=255)                                                                                           aaGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTTATGCCATAGtt                                                                <  6:146260/101‑1 (MQ=255)                                                                                           aaGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTGATGCCATAGtt                                                                >  5:146260/1‑101 (MQ=255)                                                                                            aGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAg               <  6:79935/149‑1 (MQ=255)                                                                                             ggTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGt              <  6:128347/149‑1 (MQ=255)                                                                                              gTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTg             <  6:129877/149‑1 (MQ=255)                                                                                               tAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTgg            <  2:134477/149‑1 (MQ=255)                                                                                                      gCTGGAACCAGCTGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATAGTCAGATTGGGAAAATAGTGGTTATcc      <  4:52132/148‑1 (MQ=255)                                                                                                          gCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGTTGTACGTCGATAGGGGCGTTAATGACATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATGGTGGTTATCCATGa  <  2:105729/148‑1 (MQ=255)                                                                                                            aCCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTGGTTATcc      >  5:75882/1‑142 (MQ=255)                                                                                                            aCCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTGGTTATcc      <  6:75882/142‑1 (MQ=255)                                                                                                                                          |                                                                                                                    GTCGCCGGGTTAAATACCAGACCCGCTTTACAGCCATTTTCTTTAATCAGTTGCAGCGTGCGGTCAACATGCTCGGAGGCTTCTGGATGAAAGGTAATGATGCTGGCACCAGCGGCAGCGAAATCAGGCACAATGCGATCGACGGGTTTCACCATCAGGTGTACGTCGATAGGGGCGGTAATGCCATAGTTACGCAAGGATTTCAGCACCATTGGCCCAATCGTCAGATTGGGAACATAGTGGTTATCCATGA  >  NC_000913/3514698‑3514950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.