New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1972664 =	72 (0.800)	4 (0.050)	4/238	NT	5.2%	coding (28/1662 nt)	tar	methyl‑accepting chemotaxis protein II
	?	NC_000913	1972676 =	76 (0.880)					coding (16/1662 nt)	tar	methyl‑accepting chemotaxis protein II

CCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGA  >  NC_000913/1972540‑1972821                                                                                                                                         |                                                                                                                                                  cccTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTaa                                                                                                                                        >  8:413854/1‑148 (MQ=255)   ctgctgTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAAt                                                                                                                                       >  2:147690/1‑147 (MQ=255)   ctgctgTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAAt                                                                                                                                       >  3:141917/1‑147 (MQ=255)     gctgTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCa                                                                                                                                     >  4:158620/1‑147 (MQ=255)       tgTTCCCGTAATTGATTGGAAACCACAACGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGGAACAGTGCGAAGACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCAt                                                                                                                                    >  3:131380/1‑146 (MQ=255)         ttCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAgg                                                                                                                                <  6:35984/148‑1 (MQ=255)                 attgattgGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTcc                                                                                                                        >  7:382959/1‑148 (MQ=255)                  ttgattgGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCt                                                                                                                       >  3:17876/1‑148 (MQ=255)                     attgGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGa                                                                                                                     >  1:168873/1‑147 (MQ=255)                     attgGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGa                                                                                                                     >  1:288900/1‑147 (MQ=255)                          aaaCCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAAc                                                                                                                 >  3:399504/1‑146 (MQ=255)                           aaCCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGAACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAg                                                                                                              >  5:193379/1‑148 (MQ=255)                               acaAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGATATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGa                                                                                                          <  3:120585/148‑1 (MQ=255)                               acaAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGa                                                                                                          >  1:260188/1‑148 (MQ=255)                               acaAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGa                                                                                                          <  2:168873/148‑1 (MQ=255)                               acaAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGa                                                                                                          <  2:288900/148‑1 (MQ=255)                                    gagcttctGGCAATGGTTAAGGTACTAAAAAAACAGACTCCCGTAAATAAGCTTTAACAGTGCGAATACCCCCCGCACCATTACCAACCGCGTGACTACGCGTATACGGTTAATAATAAGCCACCTTCATCAAAACAAGTTTATCTCg                                                                                                     <  6:193379/145‑1 (MQ=255)                                     ctctTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGt                                                                                                    <  6:306446/148‑1 (MQ=255)                                      tcttctGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGt                                                                                                    >  3:126506/1‑147 (MQ=255)                                             gCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCgg                                                                                              <  4:126506/146‑1 (MQ=255)                                             gCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGc                                                                                             >  6:99877/1‑147 (MQ=255)                                                  ggTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTa                                                                                                  >  6:342624/1‑137 (MQ=255)                                                  ggTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTa                                                                                                  <  5:342624/137‑1 (MQ=255)                                                   gTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAaggagg                                                                                      <  5:99877/148‑1 (MQ=255)                                                   gTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAaggag                                                                                       <  2:14818/147‑1 (MQ=255)                                                    tGAAGGGAAGATAAAAACAGACTGCCGGAATTAAGCTGTAACAGTGCGATTACCCCCAGCACCATTACCAACAGCGTGACAACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGCTCTCCTTATCGGCAAGGAggg                                                                                     >  6:349351/1‑148 (MQ=255)                                                     gAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCt                                                                                                                       <  2:77110/113‑1 (MQ=255)                                                     gAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCt                                                                                                                       >  1:77110/1‑113 (MQ=255)                                                      aaGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAgggg                                                                                    <  4:17876/147‑1 (MQ=255)                                                       aGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAgggggg                                                                                  <  4:141917/148‑1 (MQ=255)                                                           aagaaAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAAc                                                                              >  4:337482/1‑148 (MQ=255)                                                            agaaAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACt                                                                             >  2:267862/1‑148 (MQ=255)                                                              aaaaaaaCAGACTGCAGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACttt                                                                           <  6:239177/148‑1 (MQ=255)                                                               aaaaaaCAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTa                                                                          <  8:382959/148‑1 (MQ=255)                                                                ctccttgccgataacgagatcaacttgttttcaggaaggtgccttatgattaaccgtatccGCGTGACTACGCGGATACGGTTAATCa                                                                                                                                     >  6:171175‑M1/62‑88 (MQ=255)                                                                ctccttgccgataacgagatcaacttgttttcaggaaggtgccttatgattaaccgtatccGCGTGACTACGCGGATACGGTTAATCa                                                                                                                                     <  5:171175‑M1/27‑1 (MQ=255)                                                                 tccttgccgataacgagatcaacttgttttcaggaaggtgccttatgattaaccgtatccGCGTGACTACGCGGATACGGTTAATCATa                                                                                                                                   <  7:22436‑M1/29‑1 (MQ=255)                                                                 tccttgccgataacgagatcaacttgttttcaggaaggtgccttatgattaaccgtatccGCGTGACTACGCGGATACGGTTAATCATa                                                                                                                                   >  8:22436‑M1/61‑89 (MQ=255)                                                                 aaaaCAGACTGCCGGAAATAAGATGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATATCGTTATCGGCAAGTAGGGTGGAAACTTTAtt                                                                        >  4:176404/1‑148 (MQ=255)                                                                     cAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    <  3:158620/148‑1 (MQ=255)                                                                      aGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGa                                                                   <  7:413854/148‑1 (MQ=255)                                                                             cGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCAcc                                                            >  3:210926/1‑148 (MQ=255)                                                                             cGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCAcc                                                            >  7:4335/1‑148 (MQ=255)                                                                             cGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCAcc                                                            >  7:264662/1‑148 (MQ=255)                                                                                aaaTAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAAGCATAAGGCACCTTCCTGAAAACAAGTTGAACTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACccgc                                                         >  8:128674/1‑148 (MQ=255)                                                                                    aaGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACa                                                                                                                >  1:319624/1‑89 (MQ=255)                                                                                    aaGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACa                                                                                                                <  2:319624/89‑1 (MQ=255)                                                                                          tAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAAtt                                                >  2:95658/1‑147 (MQ=255)                                                                                          tAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTg                                               <  4:399504/148‑1 (MQ=255)                                                                                           aaCAGGGCGAATACCCCCAGCAACATTACCAACATCGTGAATACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTTCTGATGCCACCCGCCGCTAAAttt                                               >  1:96989/1‑146 (MQ=255)                                                                                            aCAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGGTACTCATAAGGCACCTACCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGaa                                             <  2:173144/148‑1 (MQ=255)                                                                                                tGCGAATACCCCCAGCACCATTACCAACGGCCTGACTACGCGGAGACGGTTAATCATACGGCACCTTCCTGAAAACAAGTTGATCTCGGTATCGGCAAGGAGGGGGGACACTTTATTGCTGATGCCACCCGCAGCGAAATTGAAATaa                                         <  3:28365/148‑1 (MQ=255)                                                                                                 gCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATaa                                         >  4:205981/1‑147 (MQ=255)                                                                                                      tACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAAcc                                   >  7:421481/1‑148 (MQ=255)                                                                                                         ccccAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGa                                <  4:131380/148‑1 (MQ=255)                                                                                                         ccccAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGa                                <  1:147690/148‑1 (MQ=255)                                                                                                         ccccAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGa                                <  2:260188/148‑1 (MQ=255)                                                                                                            tatgattaaccgtatccgcgtagtcacgcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagga                                                                                        <  7:22436‑M2/60‑1 (MQ=255)                                                                                                            tatgattaaccgtatccgcgtagtcacgcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagga                                                                                        >  8:22436‑M2/30‑89 (MQ=255)                                                                                                            cAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATgc                             >  1:106840/1‑148 (MQ=255)                                                                                                             aGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    >  1:103170/1‑108 (MQ=255)                                                                                                             aGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    <  2:103170/108‑1 (MQ=255)                                                                                                             aGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATgcg                            <  8:421481/148‑1 (MQ=255)                                                                                                              tgattaaccgtatccgcgtagtcacgcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAaggag                                                                                       <  5:171175‑M2/61‑1 (MQ=255)                                                                                                              tgattaaccgtatccgcgtagtcacgcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAaggag                                                                                       >  6:171175‑M2/28‑88 (MQ=255)                                                                                                              gCACCATTACCATCATCGTGACTAAGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGt                                                                                                             <  5:167635/66‑1 (MQ=255)                                                                                                              gCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATgcgc                           <  8:4335/148‑1 (MQ=255)                                                                                                              gCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATgcgc                           <  4:210926/148‑1 (MQ=255)                                                                                                               cACCATTACCAACAGCGTGCCTACGCGGATACGGGTAATCATAAGGCCCCTTCCTGAAAACAAGtg                                                                                                            >  6:167635/1‑65 (MQ=255)                                                                                                               cACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATgcg                            >  8:194087/1‑146 (MQ=255)                                                                                                                aCCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    <  1:105686/105‑1 (MQ=255)                                                                                                                aCCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    >  2:105686/1‑105 (MQ=255)                                                                                                                    ttACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGatca                     <  1:267862/148‑1 (MQ=255)                                                                                                                     tACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagg                                                                                         >  4:325313/1‑79 (MQ=255)                                                                                                                     tACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagg                                                                                         >  4:199574/1‑79 (MQ=255)                                                                                                                     tACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagg                                                                                         <  3:325313/79‑1 (MQ=255)                                                                                                                     tACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAagg                                                                                         <  3:199574/79‑1 (MQ=255)                                                                                                                     tACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGatcat                    >  4:9978/1‑148 (MQ=255)                                                                                                                       ccAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAACTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGatcatc                   <  5:349351/147‑1 (MQ=255)                                                                                                                        cAACAGCGTGACTACGCGGATACGGATAATCCTAAGGCCCCTTCCAGAAATCAACTTGATCTCGTTATCGGCAAGGAGGCGCGAAACATTATTGCTGCACCCACCCGACTCGAAAATGAAATAAAAAACCCGATGCGCAGATCATCgg                 >  1:162325/1‑148 (MQ=255)                                                                                                                        cAACAGCGTGAATACGCGGATACGGTTTATCATAAGGCACCTTACTGAAAAAAAGTTGATGTCGTTATAGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCCCCCGCCGCGAAATTGAAATAAAAAACCCGGTGCGCAGAAGATCgg                 >  6:136546/1‑148 (MQ=255)                                                                                                                          aCAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    >  3:359409/1‑95 (MQ=255)                                                                                                                          aCAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTg                                                                    <  4:359409/95‑1 (MQ=255)                                                                                                                           cAGCGTGACTACGCGGACACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGt               >  8:291771/1‑147 (MQ=255)                                                                                                                               GTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCAtt          >  1:95658‑M1/1‑148 (MQ=255)                                                                                                                                      cgcTGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAATGAGGGTGGAAACTTTATTGCTGATGCCACCCGCCGCTAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTg   <  3:176404‑M2/145‑1 (MQ=255)                                                                                                                                      cgcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTg   <  2:106840‑M2/145‑1 (MQ=255)                                                                                                                                       gcGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGa  <  7:128674‑M2/146‑1 (MQ=255)                                                                                                                                        cGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTCAAGCCCCCCGCCGCGAAATTGAAATAaaaaacccctagg                             >  8:89901‑M2/2‑115 (MQ=255)                                                                                                                                         |                                                                                                                                                  CCCTGCTGTTCCCGTAATTGATTGGAAACCACAAAGCTCTTCTGGCTATGGTGAAGGGAAGAAAAAAACAGACTGCCGGAAATAAGCTGTAACAGTGCGAATACCCCCAGCACCATTACCAACAGCGTGACTACGCGGATACGGTTAATCATAAGGCACCTTCCTGAAAACAAGTTGATCTCGTTATCGGCAAGGAGGGGGGAAACTTTATTGCTGATGCCACCCGCCGCGAAATTGAAATAAAAAACCCGATGCGCAGATCATCGGGTTCATTTCAATTGA  >  NC_000913/1972540‑1972821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.