New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3800403161 (1.790)4 (0.050) 4/238 NT 2.5% coding (563/699 nt) waaY lipopolysaccharide core biosynthesis protein
?NC_000913 = 3800415 152 (1.750)coding (551/699 nt) waaY lipopolysaccharide core biosynthesis protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 168 total aligned reads displayed.

GCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCGCATCATCAAT  >  NC_000913/3800270‑3800560
                                                                                                                                                 |                                                                                                                                                 
gggggcttgtTTACCTTTCAAAAGGCGCATTAAATTTCTCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGa                                                                                                                                                  >  6:278251‑M2/5‑146 (MQ=255)
gcgcgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTAcgctgcgctg                                                                                                                                                   >  1:246181/1‑146 (MQ=255)
  gcgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGaagc                                                                                                                                               >  8:14116‑M2/1‑144 (MQ=255)
   cgcTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCa                                                                                                                                              <  5:91111/148‑1 (MQ=255)
        gTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCtt                                                                                                                                         >  6:100804/1‑148 (MQ=255)
           tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTTCGCTGAAGCACGCTTTc                                                                                                                                       <  2:295480/147‑1 (MQ=255)
           tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTcc                                                                                                                                      >  4:243622/1‑148 (MQ=255)
           tCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTcc                                                                                                                                      >  8:417067/1‑148 (MQ=255)
               tttCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCg                                                                                                                                     >  2:436976/1‑145 (MQ=255)
                 tCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                                   >  4:406755/1‑145 (MQ=255)
                  cAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGga                                                                                                                                   >  6:271644/1‑144 (MQ=255)
                      cgccgcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGa                                                                                                                           <  2:150487/148‑1 (MQ=255)
                          gcATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGATGAAGCACGCTTTCCGGAGAGATCGATAAt                                                                                                                       >  3:245896/1‑148 (MQ=255)
                              aaaaTTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCg                                                                                                                    >  1:130228/1‑147 (MQ=255)
                               aaaTTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGaa                                                                                                                  <  5:196654/148‑1 (MQ=255)
                                    gcgcATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTc                                                                                                              <  2:350597/147‑1 (MQ=255)
                                       cATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCa                                                                                                          >  5:406700/1‑148 (MQ=255)
                                         tttttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAtt                                                                                                        >  3:173631/1‑148 (MQ=255)
                                           tttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAtttt                                                                                                      >  3:377244/1‑148 (MQ=255)
                                           tttttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAttt                                                                                                       <  2:130228/147‑1 (MQ=255)
                                             tttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAttttt                                                                                                     <  2:121155/147‑1 (MQ=255)
                                              ttACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAtttttt                                                                                                    <  5:182276/147‑1 (MQ=255)
                                                 cGATATACTAAAAGATAATAGCCTAGATCTCTACTCTCATTTTTAATACCGTAATGACGCGCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTtata                                                                                                 <  3:224893/147‑1 (MQ=255)
                                                 cGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTtata                                                                                                 <  5:271644/147‑1 (MQ=255)
                                                 cGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATaa                                                                                                <  3:90890/148‑1 (MQ=255)
                                                  gATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAAt                                                                                               <  7:185662/148‑1 (MQ=255)
                                                   atatACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAAt                                                                                               >  4:76381/1‑147 (MQ=255)
                                                    tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                             <  8:336905/148‑1 (MQ=255)
                                                    tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                             <  7:399999/148‑1 (MQ=255)
                                                    tataCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGa                                                                                             <  7:192403/148‑1 (MQ=255)
                                                      taCTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAg                                                                                           <  7:417067/148‑1 (MQ=255)
                                                        cTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGtt                                                                                         <  4:367588/148‑1 (MQ=255)
                                                          aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATa                                                                                                                         >  5:395450/1‑114 (MQ=255)
                                                          aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATa                                                                                                                         <  6:395450/114‑1 (MQ=255)
                                                          aaaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                                       >  4:291834/1‑148 (MQ=255)
                                                           aaaGATAATAGCCTATATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACTATCTTTCGCTTTACGCTGCGCTGTAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAcg                                                                                      <  7:348725/148‑2 (MQ=255)
                                                           aaaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTAc                                                                                       >  4:112208/1‑147 (MQ=255)
                                                            aaGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCa                                                                                     >  5:303728/1‑148 (MQ=255)
                                                              gATAATCGCCTAGATATCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATATGATCTATCGCTTTACGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                                   <  3:322974/148‑1 (MQ=255)
                                                              gATAATAGCCTAGATCTCTAATCTTATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                                   <  7:309149/148‑1 (MQ=255)
                                                              gATAATAGCCTAGATCTCTAATCTTATTTTTAATACAGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                                   <  7:309150/148‑1 (MQ=255)
                                                              gATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACTCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACg                                                                                   <  7:88574/148‑1 (MQ=255)
                                                               ataataGCCTAGATATATACTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCTCCATTTTTtata                                                                                                 <  1:378906/133‑1 (MQ=255)
                                                                  ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                               <  1:436976/148‑1 (MQ=255)
                                                                  ataGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATgg                                                                               <  2:419036/148‑1 (MQ=255)
                                                                     gCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGAt                                                                                 >  2:36039/1‑143 (MQ=255)
                                                                     gCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGAt                                                                                 <  1:36039/143‑1 (MQ=255)
                                                                     gCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATggggg                                                                            <  1:172440/148‑1 (MQ=255)
                                                                         aGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGc                                                                        >  8:438927/1‑148 (MQ=255)
                                                                          gATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGc                                                                                                                                           <  2:161638/80‑1 (MQ=255)
                                                                              tctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTc                                                                                                                                       <  6:86832/80‑1 (MQ=255)
                                                                               ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGaaa                                                                  >  2:207644/1‑148 (MQ=255)
                                                                               ctAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCAGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACAACGATGGGGGTCGCCAGaaa                                                                  >  4:6937/1‑148 (MQ=255)
                                                                                  aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                               <  7:72472/148‑1 (MQ=255)
                                                                                  aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                                <  3:406755/147‑1 (MQ=255)
                                                                                  aTCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                                <  3:337408/147‑1 (MQ=255)
                                                                                  aTCTCATTTTTAATACCGTAATGAAGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATATTGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                               <  8:121325/148‑1 (MQ=255)
                                                                                   tctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcca                                                               <  1:129518/147‑1 (MQ=255)
                                                                                    ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGt                                                                           >  3:172563/1‑134 (MQ=255)
                                                                                    ctcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatg                                                             >  2:94957/1‑148 (MQ=255)
                                                                                     tcATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGaa                                                                                            <  1:393973/116‑1 (MQ=255)
                                                                                      cATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACAATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgc                                                            >  6:319025/1‑147 (MQ=255)
                                                                                      cATTTATAATACCTTAATGACGCTCTAAGTCAATACGAACTTTCGCTTTACTATTAGCTGAACCACGCTTTACTGAGAGATAGATAATTCGAACATCACAATTTTTTATAATAAAg                                                                                           >  2:393973/1‑116 (MQ=255)
                                                                                         ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaa                                                         <  2:72866‑M2/147‑91 (MQ=255)
                                                                                         ttttAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAccatgccatg                                                        >  1:151925/1‑148 (MQ=255)
                                                                                             aaTACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTg                                                     <  8:323300/147‑1 (MQ=255)
                                                                                                 ccGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTa                                                <  1:207644/148‑1 (MQ=255)
                                                                                                  cGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTaa                                               <  4:348852/148‑1 (MQ=255)
                                                                                                   gTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                                   <  8:244292/79‑1 (MQ=255)
                                                                                                      aTGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATAGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAATCCATGCCATGTTGATGTAAGGCa                                           <  8:134444/148‑1 (MQ=255)
                                                                                                       tGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                                >  4:313404/1‑126 (MQ=255)
                                                                                                        gACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCAt                                          >  5:421102/1‑147 (MQ=255)
                                                                                                              ctAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACGACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattga                                   >  6:47330/1‑148 (MQ=255)
                                                                                                               tAAGTCAATACTATCTTTCGCTTTACGCTGAGCTGAAGCACGCTTTACGGAGAGATCGATAATTCGAACCTCACCAttttt                                                                                                     >  2:141190/1‑81 (MQ=255)
                                                                                                               tAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATTAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAattgat                                  >  2:200596/1‑148 (MQ=255)
                                                                                                               tAAGTCAATAATATCTTTCGATTTACGCTTCGCTGAAGCACGCTTTCCGTAGAGATCTATAATTCGAAACTCACCATTTTTTATAATGAATTTACCACGATTTGGGTAGACAGAAAAAATGCCATTTTGATGTAAGGCATTAattg                                    <  3:258085/146‑1 (MQ=255)
                                                                                                                aaGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGaa                                                                                                                  >  4:1283/1‑67 (MQ=255)
                                                                                                                aaGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGa                                                                                                                   >  8:350568/1‑66 (MQ=255)
                                                                                                                aaGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTta                                                                                                   >  1:346007/1‑82 (MQ=255)
                                                                                                                    cAATACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaa                                                       <  3:296111‑M2/122‑93 (MQ=255)
                                                                                                                    cAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCa                                           >  4:259031/1‑134 (MQ=255)
                                                                                                                     aaTACGATCTTTCGCTTTACGCTGCGCTGaagcgaaagatcgtattgacttagagcgtcattacggtattaaaaatgagattagagatctaggctattatcttttagtatatcgtaaaaaaatgcgcaattttatgcggcgtttgaa                             >  1:72866‑M2/1‑29 (MQ=255)
                                                                                                                     aaTACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGa                            <  5:84762/148‑1 (MQ=255)
                                                                                                                      aTACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGaa                           >  3:43636/1‑148 (MQ=255)
                                                                                                                        aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAAcc                                                                >  7:199224/1‑109 (MQ=255)
                                                                                                                        aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt                         >  2:342016/1‑148 (MQ=255)
                                                                                                                        aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatt                         >  1:443704/1‑148 (MQ=255)
                                                                                                                        aCGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCAATAATTGATTGCTGAatt                         >  7:246745/1‑148 (MQ=255)
                                                                                                                           aTCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAat                                      >  1:422087/1‑132 (MQ=255)
                                                                                                                           aTCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAat                                      <  2:422087/132‑1 (MQ=255)
                                                                                                                           aTCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta                      >  5:220831/1‑148 (MQ=255)
                                                                                                                           aTCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta                      >  1:322256/1‑148 (MQ=255)
                                                                                                                               ttCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAAcc                                                                                                                <  7:66659/54‑1 (MQ=255)
                                                                                                                                tCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAattttatt                    <  4:173631/145‑1 (MQ=255)
                                                                                                                                tCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAatttta                      <  3:112208/143‑1 (MQ=255)
                                                                                                                                  gCTTTACGCTGCGCTGAATCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTa               <  6:145948/148‑1 (MQ=255)
                                                                                                                                  gCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTAtttttt                <  1:94957/147‑1 (MQ=255)
                                                                                                                                     ttACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCAATTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGAATTAATTGAATGCTGAATTTTATTTTTTAgcg            >  5:111088/1‑148 (MQ=255)
                                                                                                                                               ctgAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCGCATCATCaa   >  8:267435/1‑147 (MQ=255)
                                                                                                                                               ctgAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCGCATCATCAat  <  8:191222/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GCGCGCTGGTTTCCCTTTCAAACGCCGCATAAAATTGCGCATTTTTTTACGATATACTAAAAGATAATAGCCTAGATCTCTAATCTCATTTTTAATACCGTAATGACGCTCTAAGTCAATACGATCTTTCGCTTTACGCTGCGCTGAAGCACGCTTTCCGGAGAGATCGATAATTCGAACCTCACCATTTTTTATAATGAAGTTACCACGATGGGGGTCGCCAGAAACCATGCCATGTTGATGTAAGGCATTAATTGATTGCTGAATTTTATTTTTTAGCGCATCATCAAT  >  NC_000913/3800270‑3800560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.