Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,182,938 | 0 | A | C | 60.3% | 114.0 / 127.8 | 121 | E565A (GAA→GCA) | rpoB | RNA polymerase, beta subunit |
Reads supporting (aligned to +/- strand): ref base A (28/20); new base C (43/30); total (71/50) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 122 total aligned reads displayed.
AACAACCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAACT > NC_000913/4182796‑4183084 | aacaacCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGACTGACCCGTGAACGTGCAGGCTTAGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCCTATGTCCAATCGAAACCCCTGAAGGTcc > 4:140247/1‑149 (MQ=255) caacCCGCTGTCTGAGATTACGCACATACGTCGTATCTCCGCACTCGGCGCAGGGGGTCTGCGGCGTGAAGGTGCAGGGGGCGATGGTCGGGACGTACCCCCGCCTCACTGCGGGCGCGTAGGTGCGATGGGGACCGCGGCAGGTCCgg > 8:192142/1‑148 (MQ=255) cccGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACa > 8:296637/1‑149 (MQ=255) ccGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGCCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCGGAAGGTCCGAACAt > 1:127264/1‑149 (MQ=255) gCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCg < 3:163612/149‑1 (MQ=255) tCTGAGATTCCGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGACGTTCGAGACGTACACCCGACTCACTACGTTCGCGTATGTCCAATCTATACCCCTGAAGGTCCGAACATCGGTc < 3:245712/148‑1 (MQ=255) tGAGATTACGCCCAACCGTCGTATCTCCGCACTCGGCGCAGGCGGTCGGACCCGTGAACGTGCAGGCTTCGAAGGTCGAGCCGTACCCCCGACGCCGTACGGTCGCGTATGTCCTATCGAAACCCCTGCAGTGCCGAACAGCGGTCTGa > 6:236159/1‑149 (MQ=255) agaTTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGAt < 4:316241/148‑1 (MQ=255) aTTACGCACAAACGTCGTATCTCCGCACTCTGCCCAGGCGGTATGACCCGGGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCaa < 1:151467/149‑1 (MQ=255) ttACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAAc > 6:181122/1‑149 (MQ=255) aCGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAActc > 5:209470/1‑149 (MQ=255) aCGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAActc > 3:158265/1‑149 (MQ=255) gCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTc > 1:312588/1‑125 (MQ=255) gCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTc < 2:312588/125‑1 (MQ=255) gCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGCACATCGGTCTGATCAActctc > 7:365452/1‑149 (MQ=255) gCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACATGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGACACCCCTGCAGGTCCGAACATCGGTCTGATCAActctc > 8:220023/1‑149 (MQ=255) acaAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTg > 3:28456/1‑149 (MQ=255) caAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGt < 3:77021/149‑1 (MQ=255) aaaCGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATc < 2:13448/129‑1 (MQ=255) gtcgtATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCgtg < 2:374232/149‑1 (MQ=255) gtATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTAc > 6:94383/1‑149 (MQ=255) gtATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTAc < 2:127264/149‑1 (MQ=255) ctcCGCACTCGGCCCAGGCGGTCTGACCCGTGAAAGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGca > 8:261867/1‑148 (MQ=255) tcCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGca > 3:390954/1‑147 (MQ=255) tcCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGca > 5:427877/1‑147 (MQ=255) gCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGAc < 7:438608/149‑1 (MQ=255) tCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAAc > 1:263811/1‑149 (MQ=255) ccAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCg > 4:88343/1‑106 (MQ=255) ccAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCg < 3:88343/106‑1 (MQ=255) cAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATAc < 5:94383/149‑1 (MQ=255) cAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATAc > 8:194253/1‑149 (MQ=255) cAGCCGGGCTGACCCGTGAACGTGCAGCCTGCGAAGTTCGAGACGTACACCCGACTCACTCCGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATAc < 7:192142/149‑1 (MQ=255) aGGCGGTCTGACCCGTGACCGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACg > 5:140403/1‑149 (MQ=255) gTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTc > 5:441422/1‑149 (MQ=255) aCCCGTGACCGTGCAGGCTTCGACGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAAGCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTg < 3:115448/148‑1 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCgtgt > 4:298191/1‑118 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCgtgt < 3:298191/118‑1 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCt < 5:181122/146‑1 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTga < 6:209470/149‑1 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTga < 7:296637/149‑1 (MQ=255) aCCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTga < 4:158265/149‑1 (MQ=255) ccGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTgagc > 8:42376/1‑148 (MQ=255) ccGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGACTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTgaga > 5:277787/1‑149 (MQ=255) gTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTc > 1:449431/1‑109 (MQ=255) gTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTc < 2:449431/109‑1 (MQ=255) aCGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGt < 1:14966/149‑1 (MQ=255) cGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTa < 2:71202/149‑1 (MQ=255) gTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGa > 3:312496/1‑117 (MQ=255) gTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGa < 4:312496/117‑1 (MQ=255) cgattcTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATc < 5:289769/143‑1 (MQ=255) cAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCg > 1:9250/1‑148 (MQ=255) cAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGt < 1:325575/149‑1 (MQ=255) aGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGt > 2:372743/1‑148 (MQ=255) gCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTaaa < 2:126103/149‑1 (MQ=255) gCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTa > 1:126103/1‑147 (MQ=255) ttCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTga > 6:306797/1‑131 (MQ=255) ttCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGCCTTCCTTTAGACTCCGTATCGTAAAGt > 6:77153/1‑149 (MQ=255) ttCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACACCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTTTCCTTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGt > 3:23352/1‑149 (MQ=255) ttCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGAc < 2:29623/149‑1 (MQ=255) acacCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTaa > 4:405432/1‑149 (MQ=255) acCCGACTCCCTACGGGCGCGGATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACt < 8:365452/149‑1 (MQ=255) acCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATc < 8:107373/123‑1 (MQ=255) acCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATc > 7:107373/1‑123 (MQ=255) ccGACTCACTAGGGTAGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGa < 3:42566/149‑1 (MQ=255) ccGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGa > 2:153731/1‑149 (MQ=255) gACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGAc > 3:328360/1‑148 (MQ=255) gACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGAACAACTCACTGTCCGTGTACGCACAGACTAACGAATACGGCATCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGAc > 8:447524/1‑148 (MQ=255) tCACTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGaaa > 5:236594/1‑149 (MQ=255) aCTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAAtt > 2:429824/1‑149 (MQ=255) aCTACGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGGTGTAACTGACGAAAtt > 1:148800/1‑149 (MQ=255) aCTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCACCTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAAtt > 1:413271/1‑149 (MQ=255) aCTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAAt < 1:203411/90‑1 (MQ=255) tACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGCCTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCa > 4:159635/1‑149 (MQ=255) tACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTAt > 7:459704/1‑111 (MQ=255) tACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTATGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCa > 6:63714/1‑149 (MQ=255) cGGTCGCGTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCAc > 1:304241/1‑148 (MQ=255) gTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTAc < 3:405432/149‑1 (MQ=255) gTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTAc < 6:140403/149‑1 (MQ=255) cgTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGt > 6:435490/1‑149 (MQ=255) gTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAAtt > 6:370737/1‑138 (MQ=255) gTATGTCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAAtt < 5:370737/138‑1 (MQ=255) gTATGTCCAATCGAAACCCCTCAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTCTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCCTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTc > 4:126143/1‑149 (MQ=255) tCCAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTGGTAACTGACGAAATTCACTACCTGTCTGCTa < 2:263811/149‑1 (MQ=255) cAATCGAAACCCCTGCAGGTCCGAACTTCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATc > 4:366564/1‑149 (MQ=255) cAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATc > 6:151240/1‑149 (MQ=255) cAATCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATc > 3:338419/1‑149 (MQ=255) aaTCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATc > 5:307377/1‑148 (MQ=255) tCGAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGCAACTGACGAAATTCACTACCTGTCTGCTATCg > 3:428298/1‑147 (MQ=255) tCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCg > 7:198770/1‑147 (MQ=255) gAAACCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACAGACGAAATTCACTACCTGTCTGCTATCgaag > 1:434547/1‑148 (MQ=255) aaaCCCCTGCAGGTCCGAACATCGGTCTGATCTACTCTCTGTCCGTGTACGCACAGACTAACTAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACTGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCgaagaa < 3:140247/149‑1 (MQ=255) aaaCCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCgaag > 4:357088/1‑147 (MQ=255) acccccTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGaagaag < 7:194253/147‑1 (MQ=255) aaCCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGaagaag > 7:70192/1‑149 (MQ=255) aaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCTTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGaagaag < 8:380506/149‑1 (MQ=255) aCCCCTGCAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAgg < 5:151240/149‑1 (MQ=255) cccTGAAGGTCCGAACATCGGTCTGATCATCTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGc > 3:274017/1‑148 (MQ=255) cccTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGc > 5:445866/1‑148 (MQ=255) cTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAAc > 2:231577/1‑149 (MQ=255) aaGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAACt < 1:372743/147‑1 (MQ=255) | AACAACCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAACT > NC_000913/4182796‑4183084 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |