| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3699940 | 90 (1.190) | 3 (0.040) | 3/252 | NT | 3.3% | intergenic (+47/+40) | bcsG/ldrD | DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small |
| ? | NC_000913 | = 3699964 | 90 (1.250) | intergenic (+71/+16) | bcsG/ldrD | DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3699787‑3699940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTACTGCAT < NC_000913/3699964‑3699817 CACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCC > 6:122678/1‑149CACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCC > 6:141039/1‑149 CAAACAGCACCGGTCTCCGAGAACTCAAATGCCGTAGTTTTTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGG < 4:291129/149‑1 AAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGTATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGG < 7:295840/149‑1 AACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGC < 3:251916/149‑1 cCAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCG > 5:231027/2‑149 GTTATTCAATCCCAGGATAAACCGTACGTTCGCCTGCACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGGGGCCTGGTCCGGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGAC < 7:11759/149‑1 TACCAGGAT‑AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGTCAGGCTGCCGTAATGGCAATTTGCGCC < 1:277270/134‑1 TACCAGGAT‑AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGTCAGGCTGCCGTAATGGCAATTTGCGCC > 2:277270/1‑134 CGGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTA < 5:38934/148‑1 GGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCTTGGTATTGAATAACTACT < 5:81094/149‑1 GGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAA < 1:316750/141‑1 GGGCGTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAA > 2:316750/1‑141 GTCAGGCTGCCGTAATGTCAATTTGCGCCCGGACCAGTCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTACTGCAT < 6:60416/149‑1 GTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTACTGCAT > 5:201786/1‑149 GTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTACTGCAT < 6:55512/149‑1 CACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3699787‑3699940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgTCAGGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCGAACGTACGGTTTATCCTGGTATTGAATAACTACTGCAT < NC_000913/3699964‑3699817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |