New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 243908963 (0.830)3 (0.040) 3/250 NT 5.0% coding (1032/1179 nt) yfcJ putative arabinose efflux transporter
?NC_000913 = 2439129 54 (0.760)coding (992/1179 nt) yfcJ putative arabinose efflux transporter

GTTAACCCCGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCAGAG  >  NC_000913/2438941‑2439235
                                                                                                                                                    |                                                                                                                                                  
gTTAACCCCGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCG                                                                                                                                                    >  7:232877‑M1/1‑149 (MQ=255)
 ttAACCCCGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACgcgg                                                                                                                                                   >  5:250431/1‑149 (MQ=255)
       ccGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAAc                                                                                                                                             <  7:156209/149‑1 (MQ=255)
       ccGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAAc                                                                                                                                             <  4:122397/149‑1 (MQ=255)
             aaaTGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGcc                                                                                                                                         >  8:218532/1‑147 (MQ=255)
               aTGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGt                                                                                                                                     >  1:250330/1‑149 (MQ=255)
                tGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCg                                                                                                                                           <  8:315022/142‑1 (MQ=255)
                tGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCg                                                                                                                                           >  7:315022/1‑142 (MQ=255)
                tGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTg                                                                                                                                    >  6:211138/1‑149 (MQ=255)
                 gACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGAATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGc                                                                                                                                   >  3:175903/1‑149 (MQ=255)
                    aGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGt                                                                                                                                >  5:120377/1‑149 (MQ=255)
                        tCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCcg                                                                                                                            >  4:201591/1‑149 (MQ=255)
                            gACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGaa                                                                                                                        >  7:281639/1‑149 (MQ=255)
                             aCAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGaa                                                                                                                        <  7:24525/148‑1 (MQ=255)
                             aCAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAAc                                                                                                                       >  6:285617/1‑149 (MQ=255)
                              cAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACt                                                                                                                      >  1:34294/1‑149 (MQ=255)
                               aataatACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACtt                                                                                                                     <  3:201591/149‑1 (MQ=255)
                                  aataCCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTtgt                                                                                                                   >  4:233533/1‑148 (MQ=255)
                                   ataCCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTtgtg                                                                                                                  <  3:233533/148‑1 (MQ=255)
                                   ataCCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGa                                                                                                                 <  5:211138/149‑1 (MQ=255)
                                    taCCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAg                                                                                                                >  3:142241/1‑149 (MQ=255)
                                       ccAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGtcccctcacaagttcgcggcaccgcactgggcggttacg                                                                                                             >  5:13251‑M1/1‑110 (MQ=255)
                                       ccAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAggg                                                                                                              >  3:31473/1‑148 (MQ=255)
                                         aGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTg                                                                                                                                    <  2:76029/124‑1 (MQ=255)
                                         aGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTg                                                                                                                                    >  1:76029/1‑124 (MQ=255)
                                              cGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtt                                                                                                      >  8:84047‑M2/1‑143 (MQ=255)
                                              cGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtt                                                                                                      <  2:328470‑M2/149‑7 (MQ=255)
                                               gCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtt                                                                                                      <  4:156204‑M2/148‑7 (MQ=255)
                                                  gagaTCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcag                                                                                                  <  6:13251‑M1/149‑51 (MQ=255)
                                                    gaTCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcagga                                                                                                <  2:191289‑M1/149‑53 (MQ=255)
                                                        gCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTc                                                                                            >  5:107883/1‑149 (MQ=255)
                                                               cAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGccc                                                                                     <  2:250330/149‑1 (MQ=255)
                                                                aaGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAgg                                                                                                               >  3:261776/1‑122 (MQ=255)
                                                                aaGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAgg                                                                                                               <  4:261776/122‑1 (MQ=255)
                                                                aaGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCa                                                                                    >  5:59916/1‑149 (MQ=255)
                                                                aaGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCa                                                                                    <  1:162705/149‑1 (MQ=255)
                                                                 aGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAg                                                                                   <  3:156204/149‑1 (MQ=255)
                                                                 aGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAg                                                                                   <  5:285617/149‑1 (MQ=255)
                                                                  gAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGGGAGGGGACGCGTTTAACCACCTCCACGCCCAgc                                                                                  <  3:98036/149‑1 (MQ=255)
                                                                    aaTACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAgcgc                                                                                <  4:175903/149‑1 (MQ=255)
                                                                     aTACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCa                                                                               <  2:35538/149‑1 (MQ=255)
                                                                        ccGCAGAGTAAGCATACGTGGTGGCCTGCATTCCCGCCAGCGGCCCGTAGACGCGGAGGGAGATATCCTGAAACTCGGCGTAAGCGCGGAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTACACGCCCAGCGCAGGa                                                                            <  6:317305/149‑1 (MQ=255)
                                                                         cGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtt                                                                                                      >  6:23734‑M2/1‑116 (MQ=255)
                                                                         cGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtt                                                                                                      <  5:23734‑M2/122‑7 (MQ=255)
                                                                          gAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGaaa                                                                          <  1:328470/149‑1 (MQ=255)
                                                                               gTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATaa                                                                     <  8:232877/149‑1 (MQ=255)
                                                                               gTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATaa                                                                     <  5:242868/149‑1 (MQ=255)
                                                                               gTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATaa                                                                     <  7:218532/149‑1 (MQ=255)
                                                                                  aCCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGc                                                                   <  8:281639/148‑1 (MQ=255)
                                                                                  aCCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGc                                                                   >  8:263778/1‑148 (MQ=255)
                                                                                    cAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGaa                                                                >  5:172808/1‑149 (MQ=255)
                                                                                        cGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATc                                                            <  4:31473/149‑1 (MQ=255)
                                                                                               gCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTcc                                                     >  2:43463/1‑149 (MQ=255)
                                                                                               gCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTc                                                      <  8:336674/148‑1 (MQ=255)
                                                                                               gCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTc                                                      >  7:336674/1‑148 (MQ=255)
                                                                                                ccAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATGCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCGGGCTCCg                                                    <  2:34294/149‑1 (MQ=255)
                                                                                                ccAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCg                                                    <  4:142241/149‑1 (MQ=255)
                                                                                                ccAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCCGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCg                                                    >  2:351324/1‑149 (MQ=255)
                                                                                                 cAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCgg                                                   >  1:181401/1‑149 (MQ=255)
                                                                                                  aGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGt                                                  >  3:64969/1‑149 (MQ=255)
                                                                                                    cATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGtt                                                 >  4:307924/1‑148 (MQ=255)
                                                                                                      ttCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGTGAACATCCGGCTCCGGTTAAc                                              <  6:120377/149‑1 (MQ=255)
                                                                                                       tCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGGTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAAcg                                             >  8:345368/1‑149 (MQ=255)
                                                                                                          cGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAAcgccg                                          >  2:24247/1‑149 (MQ=255)
                                                                                                            ccAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCcgcg                                        <  6:107883/149‑1 (MQ=255)
                                                                                                                     cGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAAt                               >  7:257288/1‑149 (MQ=255)
                                                                                                                     cGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGAGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAAt                               >  2:320220/1‑149 (MQ=255)
                                                                                                                         gaCGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGa                           >  4:212129/1‑149 (MQ=255)
                                                                                                                          aCGCAGAGGGCGATATCCTGACACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGCACGCGTTTAACCACCTCCACGCCCACCGCCGGAAAGAAAAGCGAACATCCTGCTCCGGTTAACGCCGCGCCCGCTACTGCGAc                          <  1:316811/149‑1 (MQ=255)
                                                                                                                                         tCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcggtatttcttgccggggcgatc           <  2:191289‑M2/149‑98 (MQ=255)
                                                                                                                                         tCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTgggg            <  6:172808/148‑1 (MQ=255)
                                                                                                                                           cTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGAcgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcggtatttcttgccggggcgatctc         <  6:13251‑M2/149‑100 (MQ=255)
                                                                                                                                           cTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCtt         >  2:234157/1‑149 (MQ=255)
                                                                                                                                              aaaCGCGGCGTAACCGCCCAGTGCTGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGc       <  4:221148/148‑1 (MQ=255)
                                                                                                                                               aaCGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcggtatttcttgccggggcgatctctgcg     >  8:84047‑M1/1‑6 (MQ=255)
                                                                                                                                               aaCGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcggtatttcttgccggggcgatctctgcg     <  2:328470‑M1/149‑144 (MQ=255)
                                                                                                                                               aaCGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcggtatttcttgccggggcgatctctgc      <  4:156204‑M1/148‑143 (MQ=255)
                                                                                                                                               aaCGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcg                                >  6:23734‑M1/1‑6 (MQ=255)
                                                                                                                                               aaCGCGtcccctcacaagttcgcggcaccgcactgggcggttacgccgcgtttcaggatatcgccctcggcgtctccgggccgctggcgggaatgctggcgaccacgtttggttactcttcg                                <  5:23734‑M1/122‑117 (MQ=255)
                                                                                                                                               aaCGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCa     <  8:257288/149‑1 (MQ=255)
                                                                                                                                                aCGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCag    >  4:61624/1‑149 (MQ=255)
                                                                                                                                                aCGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTAAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCag    >  4:107173/1‑149 (MQ=255)
                                                                                                                                                    ggcgTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCagag  >  6:162739/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GTTAACCCCGACGAAATGACAGTATCGTGACAATAATACCCAGCACCGCAGAGATCGCCCCGGCAAGAAATACCGAAGAGTAACCAAACGTGGTCGCCAGCATTCCCGCCAGCGGCCCGGAGACGCCGAGGGCGATATCCTGAAACGCGGCGTAACCGCCCAGTGCGGTGCCGCGAACTTGTGAGGGGACGCGTTTAACCACCTCCACGCCCAGCGCAGGAAAGATAAGCGAACATCCGGCTCCGGTTAACGCCGCGCCCGCTAATGCGACCCATGCACCTGGGGCTTGCCAGAG  >  NC_000913/2438941‑2439235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.