| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,733,959 | T→A | 5.6% | S80S (TCT→TCA) | xylH → | D‑xylose ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,733,959 | 0 | T | A | 5.6% | 286.0 / 5.3 | 89 | S80S (TCT→TCA) | xylH | D‑xylose ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (44/40); new base A (3/2); total (47/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 | |||||||||||
TGATGATTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGA > NC_000913/3733811‑3734103 | tgatgaTTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTct > 5:314648/1‑149 (MQ=255) gatgatTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCACGTAACGTATCAAACCAGTTACTCCAGCCCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGGTCGTCATAATTTctg > 3:259798/1‑149 (MQ=255) atgatTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCTACCTGTTAGGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGTATGGTGTTCGTCATAATTTctgc < 6:197703/149‑1 (MQ=255) tgatTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTctgct < 8:165149/149‑1 (MQ=255) ttGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGCCCACCGATGGTGCCTACTTAAGCGCCCGTATCGTCTCCAACCTGGTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGGTCGTCATAATTTCTGCTGa > 1:224441/1‑148 (MQ=255) cAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATTGTGTTCGTCATAATTTCTGCTGAAATc < 3:115683/149‑1 (MQ=255) cAGCTATCATCGCAATCATGCTCTTCTTTACATGGACCACCGATGGTGCCTAATTAAGCGCCCGTAACGTCTAAAACCTGTTACGCCAGACCGCGATTAACGGCATCCTAGCGGTAGGAATGGTGTTCGTCATAATTTATGCTGaaaaa > 2:152544/1‑147 (MQ=255) gCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGa < 1:232517/149‑1 (MQ=255) gCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCGCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGa < 3:17654/149‑1 (MQ=255) cTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGAc > 6:154480/1‑149 (MQ=255) atcatcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGTATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGAc < 4:133390/147‑1 (MQ=255) atcatcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGTATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGAc > 3:133390/1‑147 (MQ=255) tcatcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTAACGGCATCGTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCtt > 3:155269/1‑149 (MQ=255) catcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCttt > 2:4258/1‑149 (MQ=255) atcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCttt < 7:226063/148‑1 (MQ=255) atcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCttt < 5:195170/148‑1 (MQ=255) tcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGa > 4:195991/1‑142 (MQ=255) tcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGa < 3:195991/142‑1 (MQ=255) tcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCAGCAGAAAtt < 4:288560/140‑2 (MQ=255) tcGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCAGCAGAAAtt > 3:288560/1‑139 (MQ=255) cGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCg > 7:240744/1‑149 (MQ=255) cGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCg > 7:143660/1‑149 (MQ=255) aaTCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCg > 3:167988/1‑149 (MQ=255) tGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAat > 5:55204/1‑148 (MQ=255) gTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAAt < 3:75945/126‑1 (MQ=255) gTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAAt > 4:75945/1‑126 (MQ=255) tttACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGCCCTTTCCGTCGGCTCAATGATggg > 4:171997/1‑149 (MQ=255) tttACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATggg > 8:40936/1‑149 (MQ=255) ttACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATgggg > 6:311654/1‑149 (MQ=255) tACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATggg < 4:307744/147‑1 (MQ=255) ccTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTctgct > 7:267967/1‑113 (MQ=255) ccTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTctgct < 8:267967/113‑1 (MQ=255) tGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGt > 7:231234/1‑148 (MQ=255) tGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACAGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGt > 1:103472/1‑148 (MQ=255) ggACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCAGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGt > 6:263960/1‑147 (MQ=255) caccGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTg < 5:154480/149‑1 (MQ=255) caccGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTg > 8:170098/1‑149 (MQ=255) caccGATGGTGCCTACTTAAGCGCCAGTAACGTATCCAACCTGTTACGCCAGACAGAGATTACCGGCATCCTCGAGGTAGGAATGGTTTTAGTCATAATTTCTGCTGAAATCGCCCTTTCCGTCGGCTCAATTATGGGGCTTTTAGGTg > 1:248426/1‑149 (MQ=255) accGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTgg > 5:190766/1‑149 (MQ=255) ccGCTGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGc < 5:90970/149‑1 (MQ=255) ccGATGGTGCCTACTTAAGCGCCAGTCACGTCTCGATCCTGTTACGCAAGAGCGCGATTACCGGCATCCTCGCGGTAGGATTGGTGTTCGTCATAATTTATGCTTAAATCTACTTTTCCTTCTGCTCAATGTTGGGGCTGTTAGGTGGc < 2:248426/149‑1 (MQ=255) aTGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTc < 2:73241/149‑1 (MQ=255) tGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGATTGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTAGGCTCAATGATGGGGCTTTTAGGTGGcttagctg > 2:100186/1‑142 (MQ=255) gCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCgcggc > 4:67233/1‑149 (MQ=255) tACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAt > 4:41862/1‑149 (MQ=255) cTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAttt < 6:190766/149‑1 (MQ=255) cTTAAGCGCCCGTAACGTCTCCAACCTGCTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGTGCTGTTAGGTGGCGTCGCGGCGAt > 7:306356/1‑147 (MQ=255) cTTAAGAGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAt < 6:208890/147‑1 (MQ=255) ttAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTtg > 1:165295/1‑149 (MQ=255) aaGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGTCTGTTAGGTGGCGTCGCGGCGATTtgt > 1:86482/1‑148 (MQ=255) aaGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCAGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTtgt < 5:263960/148‑1 (MQ=255) aGCGCCCGTAACGTCTCCAACCTGCTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGa < 8:306356/149‑1 (MQ=255) cccGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTc < 1:4258/149‑1 (MQ=255) tAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGt < 8:231234/149‑1 (MQ=255) aCGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGt > 6:146490/1‑147 (MQ=255) aCGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTa < 6:163919/149‑1 (MQ=255) gTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATTGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAgg < 5:192079/149‑1 (MQ=255) tctcCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGc < 5:311654/149‑1 (MQ=255) cAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGc > 3:130499/1‑149 (MQ=255) aaCCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGcc < 3:67233/149‑1 (MQ=255) ttACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGTCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGc < 2:86482/148‑1 (MQ=255) ttACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGc < 7:19792/148‑1 (MQ=255) ccAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGt > 5:297039/1‑123 (MQ=255) ccAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGt < 6:297039/123‑1 (MQ=255) gACCGCGATTACCTGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACca < 4:155269/149‑1 (MQ=255) ccGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACcatc < 4:130499/149‑1 (MQ=255) cgcgATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACcatca < 3:201690/149‑1 (MQ=255) cgcgATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACcatca > 7:24428/1‑149 (MQ=255) cgcgATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTAGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTCCcatca > 5:201746/1‑149 (MQ=255) gcgATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACcatcat > 5:39165/1‑149 (MQ=255) cgATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCAtt < 7:170098/149‑1 (MQ=255) aTTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATtgt < 6:55204/149‑1 (MQ=255) taaTCCTCGCGGTAGGAAAGGTCTACGTCATAATTTCTGCTGAAATCGACATATCCGACGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGCCGATTTGTGACGTCTGGATAGCCTGGCCTTTGACACTTACAATCAATGTGACGCTg > 8:68758/3‑149 (MQ=255) ccTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTc > 5:34361/1‑149 (MQ=255) cTCGCGGAAGGAATGGTGTTCGTCATAATTTCTGCAGAAATCGACCTTTCCGTCGGCTCAATGAAGGGGCAGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTAAGCCCCTTACCATCATTGTGACGCTggat > 4:261592/1‑145 (MQ=255) tCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAttt < 5:237405/93‑1 (MQ=255) tCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGACGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAttt > 6:237405/1‑93 (MQ=255) gcgGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTgg < 6:34361/148‑1 (MQ=255) gcgGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTgg < 2:165295/148‑1 (MQ=255) gAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCtt < 6:39165/149‑1 (MQ=255) ggTGTTCGTCATAATTTCTGCTGAAATTGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGa > 3:48672/1‑125 (MQ=255) ggTGTTCGTCATAATTTCTGCTGAAATTGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGa < 4:48672/125‑1 (MQ=255) gtgtTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCgg < 5:117928/149‑1 (MQ=255) gtgtTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCg < 3:41862/148‑1 (MQ=255) tgtTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGt < 8:143660/149‑1 (MQ=255) gTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACCTCTGGTTAGGCAGGCCTTTGCCACTTACCATCAGTGTGACGCGGGTTCTGGGACTGCTTCTCGGTGCCTg > 2:208868/1‑149 (MQ=255) tCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGc > 2:187861/1‑120 (MQ=255) tCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGc < 1:187861/120‑1 (MQ=255) tCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTg > 3:165406/1‑148 (MQ=255) gtcgaTTTCAGCAGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTTTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTgg > 4:189846/5‑148 (MQ=255) aTAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGaa > 1:176838/1‑149 (MQ=255) tattttCTGCTGAAATCGACCTTTCAGTCGGATCAATGATTGGGCTGTTAGGTGGCGTCGCGGCGATTAGTGACGTCTGGTAAGGCTGGCCTTTGCCACTTACCCTCATTGTGACGCTCTTTCTGGGACTGCTTGTCGGTGACTGTAAc > 6:335944/4‑149 (MQ=255) tAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAAc < 6:283799/149‑1 (MQ=255) aaTTTCTGCTGGAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACg > 3:282664/1‑149 (MQ=255) tttCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGAGTTGTGACGTCTGGTTAGGCTGGCCTTTGCCCCTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGa > 8:296946/1‑149 (MQ=255) | TGATGATTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGA > NC_000913/3733811‑3734103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |