| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,043,899 | A→T | 5.1% | I104I (ATT→ATA) | etk ← | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,043,899 | 0 | A | T | 5.1% | 253.2 / 2.8 | 78 | I104I (ATT→ATA) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| Reads supporting (aligned to +/- strand): ref base A (35/39); new base T (2/2); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
AGTTGCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATA > NC_000913/1043753‑1044045 | aGTTGCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAAt < 7:117083/149‑1 (MQ=255) gTTGCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATg < 3:189059/149‑1 (MQ=255) gCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGt < 1:67378/148‑1 (MQ=255) gCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGACGCGCAGATTCAGTTCAGCAATGGtt > 5:63895/1‑149 (MQ=255) cTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGttt < 1:200453/149‑1 (MQ=255) gATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTa > 7:2307/1‑149 (MQ=255) aTCCTGCCCATTCAGTTGTGGAATATGCATCCAGATGATCGCCAGATCACCTGGTTTTTATTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGGTTTAc > 5:157835/1‑149 (MQ=255) aTCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTAc < 6:291662/149‑1 (MQ=255) ccTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTAcc > 5:225245/1‑148 (MQ=255) tGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCAAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGCCCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTAcc > 1:77195/1‑146 (MQ=255) ttCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCAt < 6:160522/149‑1 (MQ=255) ttCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCAt < 8:2307/149‑1 (MQ=255) ttCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTATGGTTAATCTCGCCCAGCCGCGACCCCAATTCGGAAAATACTTCTTCTCAACTATGTCGCGCAGATTGAGTTCAGCAATGGTTTTACCGAGAATc > 1:84636/1‑147 (MQ=255) aGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCATATTCAGTTCAGCAATGGTTTTACCGAGAATCATgcg > 3:44290/1‑149 (MQ=255) aGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATgcg > 8:195347/1‑149 (MQ=255) gAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTg < 8:18702/148‑1 (MQ=255) gAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTg < 1:121950/148‑1 (MQ=255) gCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCg > 3:277483/1‑125 (MQ=255) gCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCg < 4:277483/125‑1 (MQ=255) ccAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGa > 4:50985/1‑149 (MQ=255) cTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGAtctc > 5:16991/1‑149 (MQ=255) aTCTCCATCTCACCTGGTTTTTCTTTGGTTTATCTCGCCCAGCCGCGACCCACAATCGGAAAATCCTTCTGCTCAACTATGTCTAGCAGATTCAGTTCAGCAATGGTTTTAGCGAGTATCATGCGCGATTG‑CAGCAGTTGGATCTcc < 7:214981/147‑1 (MQ=255) gCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTACTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTg < 5:266368/148‑1 (MQ=255) ccAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTg > 8:309474/1‑147 (MQ=255) ccAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCa < 4:277205/149‑1 (MQ=255) aGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGa < 4:44290/149‑1 (MQ=255) aGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGa < 7:309474/149‑1 (MQ=255) cTCCCCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGGGATTCTTGCG‑GTTTGCCGGCAGTTGGATGTCGGTTGctgcgg > 5:272356/1‑144 (MQ=255) cTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCTCGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGccgcat > 5:267769/1‑144 (MQ=255) aCCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCgg < 8:41000/149‑1 (MQ=255) ccTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGACGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCggg < 6:63895/149‑1 (MQ=255) cTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGc > 8:170187/1‑149 (MQ=255) cTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGc > 1:177516/1‑149 (MQ=255) gTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCGGACTCGGGCGAt < 7:84823/149‑1 (MQ=255) gTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGa < 5:50370/148‑1 (MQ=255) tttttCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATg < 6:225245/149‑1 (MQ=255) tttGGTTAATCTAGCCCAGCCGCGACCCACAATGGGAAAATACTTCTGCTCAACTATGTGGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CCGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGttcg < 4:180204/149‑3 (MQ=255) gTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGa < 5:257793/148‑1 (MQ=255) tctcGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCgg < 6:169372/117‑1 (MQ=255) tctcGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCgg > 5:169372/1‑117 (MQ=255) tctcGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCatat > 7:345781/1‑149 (MQ=255) tcGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCg > 6:227274/1‑149 (MQ=255) gCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCatat < 8:345781/145‑1 (MQ=255) cccAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCTATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCt > 5:211516/1‑148 (MQ=255) cccAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCTATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCt > 5:206625/1‑148 (MQ=255) ccGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGt > 5:186773/1‑96 (MQ=255) ccGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGt < 6:186773/96‑1 (MQ=255) cccACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCt > 3:16712/1‑146 (MQ=255) cacaATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAg > 2:129142/1‑122 (MQ=255) cacaATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAg < 1:129142/122‑1 (MQ=255) acaATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGGTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAAt < 6:157835/149‑1 (MQ=255) aaTCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATgg < 6:16991/149‑1 (MQ=255) tCGGAAAATACTTCTGATCAACTATGTCGCGCAGATTCAGTTCAGCAATGTTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCTGTGCAGACTCTGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCg < 5:325013/149‑1 (MQ=255) cGGAAAATACTTCTGCTCAACTATGTCGCGGAGATTCAGTTCAGCAATGGTTTTACGGAGAATCATGCGCGATTG‑GAGCTGGTGGATCTCAGGTGCAGACTCGGGCGATGAGTTAGGGATAATATCGCTCAGGCCGCTGAGCATGGCGt > 4:12898/1‑149 (MQ=255) aaTACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTTAAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGAAGAGAATGGCGTTGccc > 3:17629/1‑149 (MQ=255) aTACTTCTGCTCAACTATGTCGCGCAGATGCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGGGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCt < 7:304958/149‑1 (MQ=255) tCTGCTCAACTATGTCGCGCAGATTCAGTTCAGGAATGGTTTTTCCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGAAGAGTCGTGCTCTGAGTTAGGGAGCTTATCGCTCAGGCCTCTTAGAATGGCGGTGCCCTGttgt > 4:14353/1‑147 (MQ=255) tCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGAGTG‑CAGCAGTTGGTTCTCCGGAGCCGCCTCGGGCGAGGCGTGAGGCAGCCTATCGCTGAGGCCGCTGCGCATGGCGTTGCCCTggtgt > 4:9856/1‑145 (MQ=255) cTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGttttt > 5:128009/1‑149 (MQ=255) ctctACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCt > 2:259445/1‑149 (MQ=255) cgcAACTATGTCGGGCCGCTTCAGGTCATGAATGGGTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGTATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCt < 6:267769/147‑1 (MQ=255) cTCAACTATGTCGCGCAGATTCAGTTCAGCTATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTg < 6:206625/147‑1 (MQ=255) cTCAACTATGTCGCGCAGATTCAGTTCAGCTATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTg < 6:211516/147‑1 (MQ=255) cTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGc < 7:170187/148‑1 (MQ=255) cTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCt > 5:287359/1‑149 (MQ=255) aaCTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTCCCGAGAATCATGCGCGATTG‑CAGCAGGTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTc < 8:148740/147‑1 (MQ=255) aaCTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCTCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCac > 1:261939/1‑148 (MQ=255) aaCTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCaa > 2:176895/1‑149 (MQ=255) tGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTg < 7:223831/148‑1 (MQ=255) gcAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCaga < 1:259445/149‑1 (MQ=255) cagttcagCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCt < 3:50985/148‑1 (MQ=255) ttcagCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTAGCCCTGTTTTTGCTCAACCAGGAACAGAGTATCTGCCt > 4:214866/1‑149 (MQ=255) agCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGAt < 6:292346/149‑1 (MQ=255) agCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGAt < 1:167865/149‑1 (MQ=255) gCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGAt > 5:218812/1‑148 (MQ=255) cAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCACCCTGGACCAGAGTATCTGCCTGATa > 8:223297/1‑148 (MQ=255) cAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATc < 7:29826/139‑1 (MQ=255) cAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATc > 8:29826/1‑139 (MQ=255) | AGTTGCTGATCCTGACCATTCAGTTGTGGAATATGCATCCAGCTGATCGCCAGCTCACCTGGTTTTTCTTTGGTTAATCTCGCCCAGCCGCGACCCACAATCGGAAAATACTTCTGCTCAACTATGTCGCGCAGATTCAGTTCAGCAATGGTTTTACCGAGAATCATGCGCGATTG‑CAGCAGTTGGATCTCCGGTGCAGACTCGGGCGATGAGTTAGGGATCATATCGCTCAGGCCGCTGAGAATGGCGTTGCCCTGTTTTTGCTCAACCTGGACCAGAGTATCTGCCTGATA > NC_000913/1043753‑1044045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |