| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,465,076 | T→A | 5.5% | intergenic (‑69/‑225) | mlaA ← / → yfdC | ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component/putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,465,076 | 0 | T | A | 5.5% | 238.3 / 3.5 | 73 | intergenic (‑69/‑225) | mlaA/yfdC | ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component/putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (33/36); new base A (2/2); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.96e-01 | |||||||||||
CTTGCTGATCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTT > NC_000913/2464929‑2465224 | cTTGCTGATCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTg > 8:271364/1‑149 (MQ=255) gCTGATCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGTAACG‑ATACCGTATCCGCCTGtt < 7:173260/148‑1 (MQ=255) cTGATCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTa < 7:122818/149‑1 (MQ=255) caTCTGTACAGGACCTCGCACACCCCCCCAGAACCCTACTTCCCAGAGCACGCGCCGACAGGCGAAGCTTCTGAACTGTGTCAGTCTTATTTTAAGGATTATCCAGTTTGCCAACCATGACGGAACG‑ATACCGTATACGCCTGTTTAgt > 8:310592/2‑148 (MQ=255) aTCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAg < 7:6156/147‑1 (MQ=255) cTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGCCAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCAGTTTAGgtgt > 2:210015/1‑149 (MQ=255) cTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCAGTTTAGgtgt > 2:215173/1‑149 (MQ=255) tGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGtgtg > 1:92752/1‑149 (MQ=255) tGTACCGGAACTCGCACACCACACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCCTAAATGTCTCCCGGTTTTTTTATCGCTTATGCAGGTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGTtgtg > 8:170933/1‑149 (MQ=255) tACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGgtgt < 3:255382/146‑1 (MQ=255) tACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTggg < 5:112116/149‑1 (MQ=255) ccGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGc > 7:248241/1‑148 (MQ=255) taaCTCGCACACCCCACCAGAAGCGTATTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGTCGAtt < 2:140405/148‑1 (MQ=255) cGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTaa > 8:184906/1‑148 (MQ=255) gCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTaa < 7:65409/147‑1 (MQ=255) gCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACa < 2:290008/149‑1 (MQ=255) cccACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGTAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGt > 1:239312/1‑139 (MQ=255) cccACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGt < 2:239312/139‑1 (MQ=255) cccACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGt > 6:48013/1‑149 (MQ=255) accaGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCaa < 3:186737/149‑1 (MQ=255) ccaGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAAc < 2:92752/149‑1 (MQ=255) aGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACt > 5:322381/1‑148 (MQ=255) cccAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGc > 2:225403/1‑149 (MQ=255) ccAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGcc > 4:217587/1‑149 (MQ=255) aaGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGATTGCCATCCATCACGGAACC‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCAAGACGCCctgattt > 1:302118/1‑149 (MQ=255) gcgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgc < 7:310592/149‑1 (MQ=255) gcgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgc < 1:10416/149‑1 (MQ=255) cgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGAtt > 1:168385/1‑108 (MQ=255) cgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGAtt < 2:168385/108‑1 (MQ=255) cgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCAc < 8:80920/118‑1 (MQ=255) cgcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCAc > 7:80920/1‑118 (MQ=255) gcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgct > 1:204066/1‑148 (MQ=255) gcCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgct > 3:164448/1‑148 (MQ=255) cGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgctgat > 5:164692/1‑149 (MQ=255) cGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgattt > 2:280477/1‑143 (MQ=255) cGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgattt < 1:280477/143‑1 (MQ=255) aCAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCctgatttgctgattt < 7:184906/149‑1 (MQ=255) cATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCt < 1:225403/147‑1 (MQ=255) cATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTg < 4:164448/148‑1 (MQ=255) cATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTg < 5:48013/148‑1 (MQ=255) aTAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTgg < 8:280644/148‑1 (MQ=255) aTGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATc < 2:204066/149‑1 (MQ=255) aTGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATGGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATc < 8:248241/149‑1 (MQ=255) tctcCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATcgcc > 5:318313/1‑149 (MQ=255) tcCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATcgccgc > 5:217547/1‑149 (MQ=255) ccTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGccc > 4:126581/1‑149 (MQ=255) cTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCt < 3:41198/149‑1 (MQ=255) tttttttATGGCGTATGCAGATTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTCACAGCACGTCAACTGATGGCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGGAATCGCCGCCCTGTa < 2:220025/149‑1 (MQ=255) gCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGa > 1:286821/1‑149 (MQ=255) ttATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGAtt > 7:347504/1‑149 (MQ=255) ttATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGAt > 4:81109/1‑148 (MQ=255) gCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCta > 6:214220/1‑148 (MQ=255) cAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCtat < 6:322381/148‑1 (MQ=255) cAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCAGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCCACTTGATTCtat < 1:215173/148‑1 (MQ=255) cAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCAGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCCACTTGATTCtat < 1:210015/148‑1 (MQ=255) cAGTTTGCCATCCATGACGGAACG‑ATACCGGATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCtata < 5:155945/149‑1 (MQ=255) aGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCta > 4:112094/1‑146 (MQ=255) aGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATAATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAg < 5:214220/149‑1 (MQ=255) gTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAg > 4:62809/1‑109 (MQ=255) gTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAg < 3:62809/109‑1 (MQ=255) tGCCATCCATGACGGAACG‑ATACCGTATCCTCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGaaa < 2:286821/148‑1 (MQ=255) aCGGAACGAATACC‑TATCCGCCTGTATAGGTGTGGGCGATTGTAACAGCAAGACAACTGATGTCCAGACTCCCTGATGTGCTCATTTGATCATAGCCAGGTAATCGCCGCCCTGTAGGCTACTTGATTCTAGAGAAACAGAAAAAGGc > 6:132916/1‑148 (MQ=255) ggAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCaaa > 7:180401/1‑149 (MQ=255) cG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCa < 6:318313/149‑1 (MQ=255) g‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAg < 3:217587/149‑1 (MQ=255) aTACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCta < 7:204813/123‑1 (MQ=255) aTACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCta > 8:204813/1‑123 (MQ=255) aTACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGc > 7:89095/1‑149 (MQ=255) tATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTc > 5:259123/1‑149 (MQ=255) tCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCACCCTTTTCt < 7:271364/148‑1 (MQ=255) gCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTa < 3:318564/146‑1 (MQ=255) gCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTa > 4:318564/1‑146 (MQ=255) cTGTTTAGGTGGGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACAttt < 7:333443/149‑1 (MQ=255) tGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGAtt < 7:277660/106‑1 (MQ=255) tGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGAtt > 8:277660/1‑106 (MQ=255) tGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACAtttt > 4:171353/1‑149 (MQ=255) | CTTGCTGATCTGTACCGGAACTCGCACACCCCACCAGAAGCGTAGTTCCCAGAGCAAGCGCCGACAGGCGAAGCTTCATAAATGTCTCCCTGTTTTTTTATGGCTTATGCAGTTTGCCATCCATGACGGAACG‑ATACCGTATCCGCCTGTTTAGGTGTGGGCGATTGTAACAGCACGTCAACTGATGTCCAGACGCCCTGATTTGCTGATTTGATCATAGCCTGGTAATCGCCGCCCTGTAGGCTACTTGATTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTT > NC_000913/2464929‑2465224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |