New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2405627 =	68 (0.780)	4 (0.050)	4/242	NT	6.4%	intergenic (‑555/+76)	nuoA/lrhA	NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes
	?	NC_000913	2405659 =	55 (0.690)					intergenic (‑587/+44)	nuoA/lrhA	NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes

CAAATTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGA  >  NC_000913/2405480‑2405775                                                                                                                                                    |                                                                                                                                                     gatctatcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAg                                                                                                                                                     <  7:58803‑M1/2‑1 (MQ=255)  aaaTTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGc                                                                                                                                                    >  7:27801/1‑149 (MQ=255)     tatcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGc                                                                                                                                                 <  7:254762‑M1/6‑1 (MQ=255)      atcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCt                                                                                                                                                <  8:373901‑M1/7‑1 (MQ=255)      atcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCt                                                                                                                                                <  8:276024‑M1/7‑1 (MQ=255)        aCGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTgg                                                                                                                                              >  4:94167/1‑149 (MQ=255)             ttttttAACATCATTGTAGCTGGTGATTTTTTTCAGGCGATTATTTGTGCGTGCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGTAGGATTTTTACTAAAAAAAAGCCGCTGGGGttt                                                                                                                                         <  1:196879/149‑1 (MQ=255)             ttttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGtt                                                                                                                                          >  7:247577/1‑148 (MQ=255)              tttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGttt                                                                                                                                         >  1:387698/1‑148 (MQ=255)                tttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaa                                                                                                                                       <  7:204288/148‑1 (MQ=255)                     catcatTGTCGCAGGGGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 <  4:115186/149‑1 (MQ=255)                     catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 >  3:338917/1‑149 (MQ=255)                     catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 <  2:335121/149‑1 (MQ=255)                     catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAAACTCGGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGTGGTTTAAAACAcc                                                                                                                                 >  1:292077/1‑149 (MQ=255)                      atcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaaa                                                                                                                                                      <  7:234004/127‑1 (MQ=255)                      atcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaaa                                                                                                                                                      >  8:234004/1‑127 (MQ=255)                              atccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGc                                                                                                                        <  7:256846‑M1/31‑1 (MQ=255)                               gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCt                                                                                                                       >  6:375901/1‑149 (MQ=255)                                     gATTTTTTTCATGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTTAAAAATTAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAacac                                                                                                                                  <  6:228327/132‑1 (MQ=255)                                     gATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  <  1:66472/148‑1 (MQ=255)                                      aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                <  8:250789/149‑1 (MQ=255)                                      aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                >  8:365024/1‑149 (MQ=255)                                        ttttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGtttttt                                                                                                               <  8:247577/148‑1 (MQ=255)                                         tttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTa                                                                                                              <  7:36032/148‑1 (MQ=255)                                               aGGGGATTATTTGTGCTTTCGGGACGTGAAGCTCTGGTGGTTTAAAAATGAACAGTTTTGTACGTTCTGCACTATGCTATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                       <  4:6032/149‑1 (MQ=255)                                               aGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                       <  7:149000/149‑1 (MQ=255)                                                   gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGtc                                                                                                    >  2:139758/1‑148 (MQ=255)                                                   gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGATGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTGtc                                                                                                    >  1:98035/1‑148 (MQ=255)                                                     ttattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCa                                                                                                 <  1:5830/149‑1 (MQ=255)                                                       attTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAg                                                                                                >  4:16753/1‑148 (MQ=255)                                                            tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  <  6:98109/125‑1 (MQ=255)                                                            tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  >  5:98109/1‑125 (MQ=255)                                                            tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATta                                                                                          >  7:174495/1‑149 (MQ=255)                                                            cggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATta                                                                                          >  8:256846‑M1/89‑149 (MQ=255)                                                              cGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtat                                                                                         <  1:139758/148‑1 (MQ=255)                                                               gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatc                                                                                        >  1:105657/1‑148 (MQ=255)                                                                ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  7:259202/1‑149 (MQ=255)                                                                ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  8:359449/149‑1 (MQ=255)                                                                          gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTCCACTATTGTCTCAGGAATTATCTATCGTCCGTCg                                                                            >  2:362621/1‑149 (MQ=255)                                                                          gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                             >  4:278967/1‑148 (MQ=255)                                                                          gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                             <  3:278967/148‑1 (MQ=255)                                                                            aTCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                          <  5:141698/149‑1 (MQ=255)                                                                            aTCTCTGGTGGTTGAAAAATGAACAGTGTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                          <  3:2106/149‑1 (MQ=255)                                                                               tctGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAc                                                                       >  1:396076/1‑149 (MQ=255)                                                                               gttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGa                                                                                              <  5:209757‑M1/57‑1 (MQ=255)                                                                               gttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGa                                                                                              >  6:209757‑M1/70‑126 (MQ=255)                                                                                 tggtggTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAtt                                                                         <  7:365024/145‑1 (MQ=255)                                                                                 tggtggCTGAAAAATGAACAGCTTTGAACGTTCTGCACAATGCGATGAACGAATTTTACAAAACAACAGCCGCTGGGGTGTAAAACCCCCCCAGCGGCTCCTTTTTTACACTATTGTCTCAGGAATTAGCTATCGTCCGTCGATTAc                                                                       <  2:173363/147‑1 (MQ=255)                                                                                   gtggtgGAAAAATGAACAGTCTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                   <  1:285359/149‑1 (MQ=255)                                                                                   gtggtTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                   >  8:290367/1‑149 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  8:274173/1‑124 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  8:267973/1‑124 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  7:267973/124‑1 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  7:274173/124‑1 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                    <  4:173055/142‑1 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                    >  3:173055/1‑142 (MQ=255)                                                                                         gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATcc                                                              <  5:375901/148‑1 (MQ=255)                                                                                          aaaaaTGAACAGTTGTTTACGTTCTGCACTCTGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTCGGGTTTAAAACACCCCCAGCGGCTCTGTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATccc                                                             <  1:301619/148‑1 (MQ=255)                                                                                           aaaaTGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCtt                                                           <  8:27801/149‑1 (MQ=255)                                                                                            aaaTGAACAGTTATGTACGTTCTGCACTCTGCGATGAAGGATTTTTACAAAAAATCAGCCGCTGGGGGTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTCTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCttt                                                          <  6:329686/149‑1 (MQ=255)                                                                                                 aaCAGTTTTGTACGTTCTGCACTATGAGATGCAGGATTTTTACTAAAAAAAAGCCTCTGGTGTTTAAAACACCCCCAGCGGCTCGTTATTAACACTATTGTCTCAGGACTTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaat                                                      <  1:254491/148‑1 (MQ=255)                                                                                                  aCAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatc                                                     >  8:152065/1‑148 (MQ=255)                                                                                                   cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                   <  7:290367/149‑1 (MQ=255)                                                                                                   cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                   <  1:367814/149‑1 (MQ=255)                                                                                                         tGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGACTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATg                                              <  2:387698/148‑1 (MQ=255)                                                                                                           tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                            <  8:259202/148‑1 (MQ=255)                                                                                                           tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                            <  8:1491/148‑1 (MQ=255)                                                                                                              gTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCCATGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTAAACTATTGTATCAGGAATTAGATATGTTCCGTCGATTACTGGATATCCATTAAAAACAAAAATGAaacaa                                        >  4:371510/1‑148 (MQ=255)                                                                                                                  tGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATcccc                                    >  5:296582/1‑149 (MQ=255)                                                                                                                     aatATGCGATTAAGGATTTTTACTAAATATAATCCGCTTGGGTTTTAAACAACCCCAGCGGCTCTTTTTTTACTCTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAGTCGATATGCCTTTCAATCAACAATTAATCATCCCCTTc                                 <  2:98035/147‑1 (MQ=255)                                                                                                                       tATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCg                               >  1:362976/1‑149 (MQ=255)                                                                                                                            gATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAg                            >  5:1233/1‑147 (MQ=255)                                                                                                                               gAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGa                        >  7:319662/1‑148 (MQ=255)                                                                                                                                aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                      >  4:151529/1‑149 (MQ=255)                                                                                                                                aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                      >  5:120715/1‑149 (MQ=255)                                                                                                                                 aGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAt                     >  3:7765/1‑149 (MQ=255)                                                                                                                                  ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAtt                    <  3:16753/149‑1 (MQ=255)                                                                                                                                            tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt          <  2:362976/149‑1 (MQ=255)                                                                                                                                            tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt          >  7:373901/1‑149 (MQ=255)                                                                                                                                                aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCa      >  1:119105/1‑149 (MQ=255)                                                                                                                                                    AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGa  >  3:151529‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAAATTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGA  >  NC_000913/2405480‑2405775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.