| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,149,184 | G→A | 5.4% | A361V (GCG→GTG) | eptC ← | LPS heptose I phosphoethanolamine transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,149,184 | 0 | G | A | 5.4% | 237.8 / 2.2 | 74 | A361V (GCG→GTG) | eptC | LPS heptose I phosphoethanolamine transferase |
| Reads supporting (aligned to +/- strand): ref base G (38/32); new base A (2/2); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01 | |||||||||||
CATCAAACTTGCCCTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTTCATCA > NC_000913/4149041‑4149328 | cATCAAACTTGCCCTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGCTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCActc > 5:335535/1‑149 (MQ=255) cAAACTAGCCCTGATTTTCCGGGAAGCGGTATTAGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCAATCACCACATCCAGGAACGGCTTCAGCACGTTGGGTTCGTATTCACGCGCACTCAGc > 4:81345/1‑149 (MQ=255) gCCCTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGt < 3:184256/148‑1 (MQ=255) ccTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTTGTATTCACGCGCACTCTGCGTACGTTGc > 8:46854/1‑149 (MQ=255) ccTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGc < 7:60456/149‑1 (MQ=255) cTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCt > 5:211740/1‑149 (MQ=255) cTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCt > 1:53298/1‑149 (MQ=255) aTTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTg < 2:331253/147‑1 (MQ=255) aTTTTCCGGGGAGCGGTATTTGTATTTTATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTg < 8:148900/147‑1 (MQ=255) tttCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCACACTCTGCGTACGTTGCTGGtt > 3:286666/1‑148 (MQ=255) ttCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTc < 1:87495/148‑1 (MQ=255) gCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTAc < 6:211740/148‑1 (MQ=255) ggTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGc < 2:15190/149‑1 (MQ=255) ggTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCACACTCTGCGTACGTTGCTGGTTCATGTAGTACTGc < 4:286666/149‑1 (MQ=255) tatttgtatttgATATGCGTACCGAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTGCTGGAAGGGCTTCAGCACGTTGGTGTCGTATTGACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCtt < 3:272786/149‑1 (MQ=255) tgtatttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCg > 5:211709/1‑149 (MQ=255) gtatttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCgg > 1:229999/1‑149 (MQ=255) tttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACg < 2:347684/117‑1 (MQ=255) tttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACg > 1:347684/1‑117 (MQ=255) tttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCt > 1:386345/1‑149 (MQ=255) tttgATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCt > 4:59162/1‑149 (MQ=255) gATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACg < 4:95054/114‑1 (MQ=255) gATATGCGTAACCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCAATTCCTGGAACGGCTTCAGCAATTTGGTGTCGTATTCACGCGCACTCTTCTTACGTTGCTGGTTCATGTAGTACTGCTTGTCGTTCTgtc > 2:309465/1‑147 (MQ=255) atGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGgcgc > 5:277372/1‑148 (MQ=255) cGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTCCTGGTTCATgtag < 7:130119/124‑1 (MQ=255) cGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTACTGGTTCATgtag > 8:130119/1‑124 (MQ=255) tACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGaaaa > 7:207167/1‑148 (MQ=255) aCCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAACTa > 3:67852/1‑149 (MQ=255) cccAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATa < 2:229999/148‑1 (MQ=255) ccAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGc < 7:64025/125‑1 (MQ=255) ccAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGc > 8:64025/1‑125 (MQ=255) agcagATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGt < 8:367155/149‑1 (MQ=255) aTGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCa > 6:110972/1‑149 (MQ=255) tGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCAt > 5:272879/1‑149 (MQ=255) aaCAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATgg < 3:59162/149‑1 (MQ=255) aaCAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATg < 2:386345/148‑1 (MQ=255) aaTGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTAt > 7:318756/1‑149 (MQ=255) aTGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTAtt < 8:207167/149‑1 (MQ=255) tGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCACACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCa < 4:102233/141‑1 (MQ=255) tGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCACACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCAtagatcgg > 3:102233/1‑142 (MQ=255) taTCAGTTTCTTCGTCGGTGTGTCATTCAGCACTTCAGGGTACGGCTTGATCTCGTTGGTGTCTTATTCTCGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCTGTCTGGCGGGTAATTAGGTTCAGGATGGTATTg < 4:105798/147‑1 (MQ=255) aGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTgcgggc > 8:165665/1‑149 (MQ=255) gTTTGTTCGGGGCAGGGTCATTCAGCACTTCCTGGATCGGCTGCAGCACGTTGGTGTCGTATTCTGGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTTCTGCTTGTCGGTCTGGCGCGATAATACCGTCAGCATGGTATTgcgggcg < 3:81345/149‑1 (MQ=255) gTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTgcgggcg < 4:67852/149‑1 (MQ=255) gTTTCTTCGGCGCAGGGGCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATCCCGTCAGCATGGTATTgcgggcg < 2:114305/149‑1 (MQ=255) tttCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTgcgggcgg < 1:320238/149‑1 (MQ=255) aGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTAATGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTctgct > 7:85539/1‑149 (MQ=255) gggTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTctgctg < 2:53298/149‑1 (MQ=255) gTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCtggt > 6:117772/1‑149 (MQ=255) aTTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGttggttgg < 6:211709/149‑1 (MQ=255) aGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACTCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGAt > 1:2243/1‑149 (MQ=255) aCTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATc > 7:402253/1‑147 (MQ=255) ttCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAg > 5:222084/1‑148 (MQ=255) tGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGt > 1:373931/1‑149 (MQ=255) gAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGttt > 8:4781/1‑149 (MQ=255) gAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGATCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTAAGCATGTTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGgtt > 5:121421/1‑149 (MQ=255) cACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCa > 2:58395/1‑129 (MQ=255) cACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCa < 1:58395/129‑1 (MQ=255) cACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCt < 4:279637/149‑1 (MQ=255) cACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGGCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCt > 5:24956/1‑149 (MQ=255) gTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGtt < 6:277372/149‑1 (MQ=255) gtgtCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTtcat < 7:165665/149‑1 (MQ=255) gtgtCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTtcat > 3:147235/1‑149 (MQ=255) tgtCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAAt > 3:220553/1‑71 (MQ=255) tgtCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAAt < 4:220553/71‑1 (MQ=255) tCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTtc > 6:350085/1‑144 (MQ=255) tCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTtc < 5:350085/144‑1 (MQ=255) tCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTcatcat > 1:214580/1‑149 (MQ=255) gTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGt > 7:231067/1‑149 (MQ=255) tATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGGCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGtt < 5:110972/149‑1 (MQ=255) aTTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGtt > 3:251045/1‑148 (MQ=255) tCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTtcat > 3:306171/1‑149 (MQ=255) cACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTtcat > 1:366399/1‑148 (MQ=255) aCGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGTTTTTATAACCCGCCTGTTTCATCATGTtcatca < 2:2243/149‑1 (MQ=255) cgcgCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTtca > 7:214903/1‑145 (MQ=255) cgcgCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTtca < 8:214903/145‑1 (MQ=255) gcgcACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGt < 1:275568/141‑1 (MQ=255) gcgcACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGt > 2:275568/1‑141 (MQ=255) | CATCAAACTTGCCCTGATTTTCCGGGTAGCGGTATTTGTATTTGATATGCGTACCCAGCAGATGAACAATGATCAGTTTCTTCGGCGCAGGGTCATTCAGCACTTCCTGGAACGGCTTCAGCACGTTGGTGTCGTATTCACGCGCACTCTGCGTACGTTGCTGGTTCATGTAGTACTGCTTGTCGGTCTGGCGCGAAAATACCGTCAGCATGGTATTGCGGGCGGTCATCGTCTGCTGGTTGGTGATCCAGAAGGTTTTATAACCCGCCTGTTTCATCATGTTCATCA > NC_000913/4149041‑4149328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |