New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)76 (0.870) 63/286 0.3 57.1% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3902213 57 (0.650)coding (8/1617 nt) bglH carbohydrate‑specific outer membrane porin, cryptic

Only 100 of 137 total aligned reads displayed.

TTTATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACCTCTGCATACCATCCGAA  >  NC_000913/3902065‑3902360
                                                                                                                                                    |                                                                                                                                                   
tttATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTc                                                                                                                                                     >  4:334198/1‑149 (MQ=255)
 ttATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGTCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCg                                                                                                                                                    <  1:159434‑M2/149‑2 (MQ=255)
 ttATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTc                                                                                                                                                     >  4:38712/1‑148 (MQ=255)
 ttATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCg                                                                                                                                                    <  4:286967‑M2/149‑2 (MQ=255)
  tataCTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTc                                                                                                                                                     <  8:245622/147‑1 (MQ=255)
    taCTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggta                                                                                                                                                 >  3:334198‑M2/1‑145 (MQ=255)
      gtttttGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATGGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACa                                                                                                                                               <  8:132704/148‑1 (MQ=255)
      atttttGAGTTCTCTTTGCGTTTATCTTAACTCATTTTCTAATAACTCAAGGCGTTGTTCCACGTTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGTTAATAAGATTTAGTCTAAACa                                                                                                                                               <  8:137806/148‑1 (MQ=255)
       tttttGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTTCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTAGTCggtaat                                                                                                                                               <  5:73766‑M2/148‑7 (MQ=255)
       tttttGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCGAACGGTGCCATTAAGAAGATGTCAGAGGTAATAAGATTTCGTCTAAACa                                                                                                                                               >  2:298929/1‑148 (MQ=255)
         tttGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACataa                                                                                                                                            >  7:53304/1‑149 (MQ=255)
                  gCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaactta                                                                                                                                   <  8:150770‑M2/149‑19 (MQ=255)
                   cTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTa                                                                                                                                  <  7:197741/149‑1 (MQ=255)
                    tttGCGTTTCTCTTAACGCGTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGATAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCgggaatgactccaacttatt                                                                                                                                 <  6:253822‑M2/149‑21 (MQ=255)
                      tGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattga                                                                                                                               <  4:155135‑M2/149‑23 (MQ=255)
                       gCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattga                                                                                                                               >  5:321466‑M2/1‑126 (MQ=255)
                        cGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTg                                                                                                                             <  5:357513/149‑1 (MQ=255)
                           ttCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCa                                                                                                                           >  8:251698/1‑148 (MQ=255)
                             ctctTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgtt                                                                                                                        <  3:35574‑M2/149‑30 (MQ=255)
                             ctctTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgtt                                                                                                                        <  8:168052‑M2/149‑30 (MQ=255)
                               ctTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCaaaga                                                                                                                       >  4:179587/1‑148 (MQ=255)
                                ttAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCATTGATTGTGCAGAAAAGGCTAACGGTGCAATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgtttta                                                                                                                     <  4:107647‑M2/149‑33 (MQ=255)
                                ttAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttt                                                                                                                       >  2:292693‑M2/1‑117 (MQ=255)
                                  aaCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAACGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgtttt                                                                                                                      >  1:194293‑M2/1‑115 (MQ=255)
                                  aaCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCaaagaaag                                                                                                                    >  1:258804/1‑148 (MQ=255)
                                   aCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgt                                                                                                                  <  1:216840‑M2/149‑36 (MQ=255)
                                   aCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAaagaaaga                                                                                                                   <  6:271741/148‑1 (MQ=255)
                                   aCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAagaaagaa                                                                                                                  <  8:53304/149‑1 (MQ=255)
                                   aCGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGATAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAagaaagaa                                                                                                                  <  1:117413/149‑1 (MQ=255)
                                    cGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAAt                                                                                                                 >  2:50349/1‑149 (MQ=255)
                                      ccTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttca                                                                                                               >  2:54506‑M2/1‑111 (MQ=255)
                                       cTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgtt                                                                                                                 <  7:47557‑M2/146‑37 (MQ=255)
                                       cTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTaa                                                                                                              >  5:212065/1‑149 (MQ=255)
                                       cTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCACTTTATGGTGCAAAGAAAGAATTaa                                                                                                              >  7:363845/1‑149 (MQ=255)
                                          ttCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                             >  4:202044‑M2/1‑107 (MQ=255)
                                           tCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatga                                                                                                                                             >  1:133692‑M2/1‑106 (MQ=255)
                                           tCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatga                                                                                                                                             <  2:133692‑M2/114‑9 (MQ=255)
                                             taataaCTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAAcgcatc                                                                                                        >  5:107575/1‑149 (MQ=255)
                                               ataaCTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAAcgcatcgc                                                                                                      <  8:347004/149‑1 (MQ=255)
                                                   cTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                                  >  6:317465‑M2/1‑98 (MQ=255)
                                                   cTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATcc                                                                                                  <  5:256022/149‑1 (MQ=255)
                                                    tCAAGGCTTTGTTCCACCGTTAATGAATCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                                 >  6:355866‑M2/1‑97 (MQ=255)
                                                    tCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                                 <  3:45471‑M2/149‑53 (MQ=255)
                                                     cAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACgcatcgcatc                                                                                                   >  1:276071/1‑146 (MQ=255)
                                                      aaGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGa                                                                                               >  8:116020/1‑149 (MQ=255)
                                                         gCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                            <  4:118627‑M2/149‑58 (MQ=255)
                                                         gCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                            >  1:180356‑M2/1‑92 (MQ=255)
                                                           gttgttCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                          <  7:28319‑M2/149‑60 (MQ=255)
                                                            ttgttCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTc                                                                                         <  1:154956/149‑1 (MQ=255)
                                                              gttCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGAAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCt                                                                                        <  6:107575/148‑1 (MQ=255)
                                                                  cACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAAc                                                                                                             <  7:147189/123‑1 (MQ=255)
                                                                     cGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGcga                                                                                <  1:50349/149‑1 (MQ=255)
                                                                          aTGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                            >  3:131703‑M2/1‑75 (MQ=255)
                                                                             aTTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                        <  3:146167‑M2/149‑78 (MQ=255)
                                                                             aTTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                        <  4:59015‑M2/149‑78 (MQ=255)
                                                                             aTTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAAt                                                                         >  8:185298/1‑148 (MQ=255)
                                                                                cAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTaa                                                                      <  5:140537/148‑1 (MQ=255)
                                                                                 aGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                      <  2:100214‑M2/147‑80 (MQ=255)
                                                                                    cAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGc                                                                 <  1:355809/149‑1 (MQ=255)
                                                                                       tGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga                                                              >  1:100214‑M2/1‑62 (MQ=255)
                                                                                           tgtgCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgattgtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                          <  5:127506‑M2/149‑92 (MQ=255)
                                                                                            gtgCAGAAAAGGCTAACGGTTCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                          >  2:222682‑M2/1‑57 (MQ=255)
                                                                                            gtgCAGAAAAGGCTAACGGTGCCATTTATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                          <  2:116814‑M2/148‑92 (MQ=255)
                                                                                            gtgCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                          >  4:147518‑M2/1‑57 (MQ=255)
                                                                                             tgCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga                                                        <  7:212313‑M2/149‑94 (MQ=255)
                                                                                              gCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttatt                                                                                                                                 >  2:70918‑M2/1‑55 (MQ=255)
                                                                                              gCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaaggactccaacttatt                                                                                                                                 <  1:70918‑M2/75‑21 (MQ=255)
                                                                                                aGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                                     <  6:235867‑M2/149‑97 (MQ=255)
                                                                                                 gAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc                                                    <  1:68923‑M2/149‑98 (MQ=255)
                                                                                                     aGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTAtttttt                                                <  3:347929/149‑1 (MQ=255)
                                                                                                     aGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTGCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTAtttttt                                                <  1:298929/149‑1 (MQ=255)
                                                                                                       gCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgcctgccgtcc                                               <  4:308274‑M2/148‑103 (MQ=255)
                                                                                                                 ccATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                     >  8:28319‑M2/1‑36 (MQ=255)
                                                                                                                  caatcataaGATGGCACAGGGAATAAGATTTCGTCTAACCATCATATCCCTTTATGGTGCACAGAACGAATTACCGCCCCGCAGCCAGACTGTTCTGAATGCGACGATAATTACGGTGCGTTACTGGTTATTTTTTTTAATGACAGccc                                   <  8:363845/144‑1 (MQ=255)
                                                                                                                  cATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag                                   <  7:143278‑M2/149‑115 (MQ=255)
                                                                                                                  cATTAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag                                   >  5:104801‑M2/1‑35 (MQ=255)
                                                                                                                  cATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGccc                                   <  2:276071/149‑1 (MQ=255)
                                                                                                                   aTTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATTAAAGcccc                                  >  3:174813/1‑149 (MQ=255)
                                                                                                                    ttAATAAGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                                 >  5:235867‑M2/1‑33 (MQ=255)
                                                                                                                    ttAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTGTATGGTGCAAAGAAAGAATTATCGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGccccc                                 >  3:286154/1‑149 (MQ=255)
                                                                                                                       ataaGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                               >  3:153833‑M2/1‑30 (MQ=255)
                                                                                                                       ataaGATGGCAGAGGTAATAAGATTTCGTCggtaatgactccaacttattgatagtggtttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                              >  5:340119‑M2/1‑30 (MQ=255)
                                                                                                                       ataaGATGGCAGAGGTAATAAGATTTCGTCTAAACATACTATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCcgcg                              >  7:339737/1‑149 (MQ=255)
                                                                                                                          aGATGGCAGATGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTc                            <  3:268380/148‑1 (MQ=255)
                                                                                                                          aGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCt                           <  7:185298/149‑1 (MQ=255)
                                                                                                                               gCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGAt                       <  6:108998/148‑1 (MQ=255)
                                                                                                                                   agGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACct                  <  7:251698/149‑1 (MQ=255)
                                                                                                                                    ggTAATAAGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggactttgccatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag                 >  3:247169‑M2/1‑17 (MQ=255)
                                                                                                                                     gTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACctct                <  2:150082/149‑1 (MQ=255)
                                                                                                                                      taataaGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACCTCTg               >  8:298746/1‑149 (MQ=255)
                                                                                                                                       aataaGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaccgcgacttccgtccccgccgtgcccggtgctgcctcagattcaggt               <  3:237767‑M2/148‑135 (MQ=255)
                                                                                                                                        ataaGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta             <  4:76559‑M2/149‑137 (MQ=255)
                                                                                                                                        ataaGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta             >  1:35378‑M2/1‑13 (MQ=255)
                                                                                                                                        ataaGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt              >  3:155135‑M2/1‑13 (MQ=255)
                                                                                                                                           aGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc          >  7:168052‑M2/1‑10 (MQ=255)
                                                                                                                                           aGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc          >  1:116814‑M2/1‑10 (MQ=255)
                                                                                                                                           aGATTTCGTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg           >  4:146167‑M2/1‑10 (MQ=255)
                                                                                                                                             aTTTCGTCggtaatgactccaacttattgatattgttttatgttcagataattcaagattcctttgtcatgaagatcaaccgattttgagaacgaaagctacttccgtccaagccgtgacaggtgctgcctcagattcaggttatgcag        <  7:253523‑M2/149‑142 (MQ=255)
                                                                                                                                                   tcggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaat  <  3:203411‑M2/149‑148 (MQ=255)
                                                                                                                                                   tCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACCTCTGCATACCATCCg    >  7:227947/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TTTATACTTTTTGAGTTCGCTTTGCGTTTCTCTTAACGCCTTTTCTAATAACTCAAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGAATGCGACGATAATTAAGGTGCTTTAATGGTTATTTTTTTTAATGACAGCCCCCGCGTCTTGATCACCTCTGCATACCATCCGAA  >  NC_000913/3902065‑3902360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.