mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4075866 | 218 (1.150) | 4 (0.020) | 3/472 | NT | 1.6% | coding (314/600 nt) | yihX | alpha‑D‑glucose‑1‑phosphate phosphatase, anomer‑specific |
| ? | NC_000913 | = 4076764 | 267 (1.420) | coding (619/873 nt) | yihY | BrkB family putative transporter, inner membrane protein | |||||
| * | ? | NC_000913 | = 3251393 | 146 (0.770) | 3 (0.020) | 3/464 | NT | 1.5% | coding (370/987 nt) | yqjG | putative S‑transferase |
| ? | NC_000913 | = 3251598 | 257 (1.390) | coding (575/987 nt) | yqjG | putative S‑transferase | |||||
| * | ? | NC_000913 | = 3154353 | 153 (0.810) | 6 (0.030) | 5/460 | NT | 3.9% | coding (866/957 nt) | yqhC | transcriptional activator of yqhD |
| ? | NC_000913 | = 3154366 | 147 (0.800) | coding (853/957 nt) | yqhC | transcriptional activator of yqhD | |||||
| * | ? | NC_000913 | 2070250 = | 108 (0.570) | 3 (0.020) | 3/460 | NT | 2.7% | noncoding (22/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2070480 = | 116 (0.630) | intergenic (+6/‑180) | yoeA/yeeP | CP4‑44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C‑terminal deletion/pseudogene, CP4‑44 prophage; 50S ribosome‑binding GTPase family;Phage or Prophage Related; putative histone | |||||
| * | ? | NC_000913 | = 441099 | 194 (1.020) | 3 (0.020) | 3/468 | NT | 1.5% | coding (3/900 nt) | ispA | geranyltranstransferase |
| ? | NC_000913 | = 441387 | 192 (1.030) | intergenic (‑44/‑162) | xseB/thiI | exonuclease VII small subunit/tRNA s(4)U8 sulfurtransferase | |||||
| * | ? | NC_000913 | 365274 = | 253 (1.330) | 3 (0.020) | 3/460 | NT | 1.2% | coding (1032/3075 nt) | lacZ | beta‑D‑galactosidase |
| ? | NC_000913 | = 365270 | 244 (1.330) | coding (1036/3075 nt) | lacZ | beta‑D‑galactosidase | |||||