New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3144480	60 (1.200)	3 (0.060)	3/464	NT	5.6%	coding (661/987 nt)	hybA	hydrogenase 2 4Fe‑4S ferredoxin‑type component
	?	NC_000913	= 3144983	45 (0.950)					coding (158/987 nt)	hybA	hydrogenase 2 4Fe‑4S ferredoxin‑type component

ACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTAATGGACAATGCCGGTTTTCGGATCTTTTTTC  >  NC_000913/3144215‑3144754                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                   aCGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGAGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCt                                                                                                                                                                                                                                                             <  1:146352/289‑1 (MQ=255)               cAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGctct                                                                                                                                                                                                                                               >  1:328066/1‑289 (MQ=255)                   acaGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCtt                                                                                                                                                                                                                                              <  1:66347/286‑1 (MQ=255)                                 catcatGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAGGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAAt                                                                                                                                                                                                                              >  1:73433/1‑288 (MQ=255)                                     atGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCTTCAGCCCTTCACTCGTACCGAAAATCAcc                                                                                                                                                                                                                          >  2:185876/1‑288 (MQ=255)                                     atGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCAcc                                                                                                                                                                                                                          >  2:301313/1‑288 (MQ=255)                                            tataCAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGcgcccgc                                                                                                                                                                                                                  <  1:301313/289‑1 (MQ=255)                                                  gggTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTACGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCACCAGACGGTTTTTCGCCTCCGCCATCAGCTCTTCACGCCTACCGAACATCACCGCCCCCGCCGGGc                                                                                                                                                                                                             >  2:463528/1‑288 (MQ=255)                                                   ggTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGca                                                                                                                                                                                                            >  2:19961/1‑288 (MQ=255)                                                   ggTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCG‑CCGCCGGGcac                                                                                                                                                                                                           >  2:421293/1‑288 (MQ=255)                                                   ggTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCCCCTCCGCCATCCGCCCTTCCCGCGTACCGAAAATCCCCGCGCCCCCCGGGcc                                                                                                                                                                                                            >  2:405035/1‑287 (MQ=255)                                                   ggTGTGTTGAATA‑TTTCGGAACGCGCACCGGTTGAAAGATCGTCCAGTTTCGGCAGGTCGTGATTTTCCTAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTTCCGCCGTAAAGTTGCGGGTAATATTTCGGCCCCGTATGGCGGTAAGTGTCGCCAGATTTCCGCGTCTGTCGTGGATAGTGGTATTCGCTGCCCGGCTTCAGCCCCCGACGTTTTTTTCCCTCCGTCATCAGCTCCCTACGCGTACCGAAAATCCACCCGCCCCCCGGGcac                                                                                                                                                                                                           >  2:12516/1‑288 (MQ=255)                                                   ggTGTGTTGAACATTTTCGGAACACGAACCGGTAGAAAGATCGTCCAGTTGCGGCAGGTCTCGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGca                                                                                                                                                                                                            <  2:231406/288‑1 (MQ=255)                                                    gtgtgtTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGca                                                                                                                                                                                                            <  2:98837/287‑1 (MQ=255)                                                         ttGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACTCGTACCGAAAATCCCCGCGCCCGCCGGGCACACTTCt                                                                                                                                                                                                     >  1:231406/1‑289 (MQ=255)                                                          tGAATATTGTCGGCACGCGAACCGGTTGAAAGATCGTCCAGTTTCGTCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTa                                                                                                                                                                                                    <  2:229684/289‑1 (MQ=255)                                                           gAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCG‑CCGCCGGGCACACTTCTACg                                                                                                                                                                                                  <  1:421293/289‑1 (MQ=255)                                                             atatTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACg                                                                                                                                                                                                  <  1:336572/288‑1 (MQ=255)                                                                                       aaGATCTGCCAGTTTCGGCAGGTTGAGATTTTCATAGGGCCCACCCGTCAGTACCAGAACCTGAGTCCCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTGCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCgag                                                                                                                                                                        <  2:90943/288‑1 (MQ=255)                                                                                       aaGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCgaga                                                                                                                                                                       <  1:12516/289‑1 (MQ=255)                                                                                          aTCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACGCTTCTACGCAGCCAGGTAGACCGCCTTACTCGAGACGt                                                                                                                                                                    >  1:135110/1‑289 (MQ=255)                                                                                            cGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGtt                                                                                                                                                                   >  1:33261/1‑288 (MQ=255)                                                                                                    ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTgcgtcaccaagtgtcaggatatcaatttccctgaacgtaacccgcaaggggaacagacctggtcgaacaacgacaaactgtcgccgtataccaataacatcattcaggtgtggaccagcggc                                                                                                                                                          >  2:105358‑M1/1‑167 (MQ=255)                                                                                                    ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTc                                                                                                                                                                                                                                                                                   >  2:423626/1‑168 (MQ=255)                                                                                                    ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTc                                                                                                                                                                                                                                                                                   <  1:423626/168‑1 (MQ=255)                                                                                                    ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCtt                                                                                                                                                          <  1:405035/289‑1 (MQ=255)                                                                                                        gCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACg                                                                                                                                                                                                  >  2:174625/1‑245 (MQ=255)                                                                                                        gCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACg                                                                                                                                                                                                  <  1:174625/245‑1 (MQ=255)                                                                                                            gTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCgcgc                                                                                                                                                                                                                      >  2:455884/1‑221 (MQ=255)                                                                                                            gTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCgcgc                                                                                                                                                                                                                      <  1:455884/221‑1 (MQ=255)                                                                                                             tCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTAcc                                                                                                                                                                                                                                    <  1:115193/206‑1 (MQ=255)                                                                                                             tCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTAcc                                                                                                                                                                                                                                    >  2:115193/1‑206 (MQ=255)                                                                                                              cgggaTTTTCATAAAGCACACCCGTCCGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCTCCGTACAGATGCGGATACTATTTCGGCGCCGTATGCAGGTCAGGGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGca                                                                                                                                                <  2:135110/286‑1 (MQ=255)                                                                                                                   ttttCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCt                                                                                                                                           <  1:327317/289‑1 (MQ=255)                                                                                                                     ttCATAAGGCACACCCGTCAGTACCAGCACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCTTCTGACGCGGATAGTTGTATTCGCTGCCAGGCGTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGGACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCg                                                                                                                                         <  1:463114/289‑1 (MQ=255)                                                                                                                        aTAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCAc                                                                                                                                      <  1:19961/289‑1 (MQ=255)                                                                                                                            ggCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTgcgtcaccaagtgtcaggatatcaatttccctgaacgtaacccgcaaggggaacagacctggtcgaacaacgacaaactgtcgccgtataccaataacatcattcaggtgtggaccagcggcacaggggtcaacaaagaccaggag                                                                                                                                  >  1:120798‑M1/1‑143 (MQ=255)                                                                                                                             gCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTgcgtcaccaagtgtcaggatatcaatttccctgaacgtaacccgcaaggggaacagacctggtcgaacaacgacaaactgtcgccgtataccaataacatcattcaggtgtggaccagcggcccaggggtcaacaaagaccaggagg                                                                                                                                 >  1:102036‑M1/1‑142 (MQ=255)                                                                                                                                           aCCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACCCTTCTACGCAGCCAGGTAGACCGCCTTTACCCACACGTTCCCCACCTTCCTGGTTGCACATCTCGCACTTATGCAGCCCACCAAACg                                                                                                                   >  2:108428/1‑289 (MQ=255)                                                                                                                                           aCCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACTCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCAACCCTTTCTGTTTGCACAGCTCGCACTTATCCAGCGCACAAAACg                                                                                                                   >  2:323078/1‑289 (MQ=255)                                                                                                                                           aCCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCaa                                                                                                                      <  1:108428/286‑1 (MQ=255)                                                                                                                                               gAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGgtt                                                                                                               >  1:325306/1‑289 (MQ=255)                                                                                                                                                 aCCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCg                                                                                                                                         <  1:364872/261‑1 (MQ=255)                                                                                                                                                 aCCTGAGTACCGCCGCCCTCGTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGgttgt                                                                                                             <  1:463528/289‑1 (MQ=255)                                                                                                                                                    tGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTtgttgt                                                                                                          >  1:311427/1‑289 (MQ=255)                                                                                                                                                      aGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAg                                                                                                        >  2:237786/1‑289 (MQ=255)                                                                                                                                                        tACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGt                                                                                                       <  2:311427/288‑1 (MQ=255)                                                                                                                                                             ccgccCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCgaga                                                                                                                                                                       >  1:294593/1‑219 (MQ=255)                                                                                                                                                             ccgccCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCgaga                                                                                                                                                                       <  2:294593/219‑1 (MQ=255)                                                                                                                                                                                                         cGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCg                                                     <  1:319473/289‑1 (MQ=255)                                                                                                                                                                                                            aTGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCg                                                     <  1:188747/286‑1 (MQ=255)                                                                                                                                                                                                                     aGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGCCAGGCGACCATGCAGTAACGGCAGCCGGCGCACACATCt                                         >  1:365106/1‑289 (MQ=255)                                                                                                                                                                                                                     aGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCAAAGCTCGCACTTATGCAGCGCACCCAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCGGCCGGTGccaccacct                                         >  2:109879/1‑281 (MQ=255)                                                                                                                                                                                                                      gtgtCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTCTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACCGGTTGTTGTAGTCGTACTTCGGCACTTTGTACGGACAGCCGACCATGCAGTAACCGCTGCCGGTGcccccctcc                                         >  2:188747/1‑280 (MQ=255)                                                                                                                                                                                                                        gtCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTg                                      <  1:185876/289‑1 (MQ=255)                                                                                                                                                                                                                         tCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCGTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTg                                      <  2:73433/288‑1 (MQ=255)                                                                                                                                                                                                                             cAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTa                                 <  1:323078/289‑1 (MQ=255)                                                                                                                                                                                                                                     aGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTAATGGACaa                         <  2:328066/289‑1 (MQ=255)                                                                                                                                                                                                                                        gTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTg                                      <  1:322236/273‑1 (MQ=255)                                                                                                                                                                                                                                                  gATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGGGCAACCCTCTTTGTCGTAATGGa                            >  2:322236/1‑273 (MQ=255)                                                                                                                                                                                                                                                       tGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCt                                                                                                                                           >  2:116918/1‑157 (MQ=255)                                                                                                                                                                                                                                                       tGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCt                                                                                                                                           <  1:116918/157‑1 (MQ=255)                                                                                                                                                                                                                                                         gTATTCGCTGCCAGGCTTCAGCGCCGGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGGGTACCCAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACGCCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGc                                                       <  1:205383/239‑1 (MQ=255)                                                                                                                                                                                                                                                            ttCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTAATGGACAATGCCGGTTTTCGGATCTTTTTTc  <  1:109879/289‑1 (MQ=255)                                                                                                                                                                                                                                                            gtCGCTTCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCGCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTAATGGACAATGCCGGTTTTCGGATCTTTTTTc  <  2:365106/288‑1 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                   ACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTTTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTATTCGCTGCCAGGCTTCAGCGCCAGACGTTTTTTCGCCTCCGCCATCAGCTCTTCACGCGTACCGAAAATCACCGCGCCCGCCGGGCACACTTCTACGCAGCCAGGTAGACCGCCTTTATCGAGACGTTCCACACCTTTCTGGTTGCACAGCTCGCACTTATGCAGCGCACCAAACGGGTTGTTGTAGTCGTACTTCGGCACGTTGTACGGACAGGCGACCATGCAGTAACGGCAGCCGGTGCACACATCTTTGTCGTAATGGACAATGCCGGTTTTCGGATCTTTTTTC  >  NC_000913/3144215‑3144754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.