mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4485077 | 53 (1.060) | 4 (0.080) | 3/478 | NT | 6.7% | coding (875/1512 nt) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| ? | NC_000913 | = 4485154 | 60 (1.230) | coding (798/1512 nt) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor | |||||
| * | ? | NC_000913 | = 4432232 | 73 (1.460) | 4 (0.080) | 3/472 | NT | 5.9% | coding (825/966 nt) | ytfF | DMT transporter family inner membrane protein |
| ? | NC_000913 | = 4433241 | 56 (1.160) | coding (784/861 nt) | qorB | NAD(P)H:quinone oxidoreductase | |||||
| * | ? | NC_000913 | = 3826385 | 61 (1.220) | 3 (0.060) | 3/468 | NT | 4.7% | coding (1176/2082 nt) | recG | ATP‑dependent DNA helicase |
| ? | NC_000913 | = 3826563 | 64 (1.340) | coding (1354/2082 nt) | recG | ATP‑dependent DNA helicase | |||||
| * | ? | NC_000913 | = 3511661 | 58 (1.160) | 3 (0.060) | 3/480 | NT | 4.8% | coding (684/906 nt) | yhfZ | putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | = 3511833 | 63 (1.280) | coding (512/906 nt) | yhfZ | putative DNA‑binding transcriptional regulator | |||||
| * | ? | NC_000913 | = 3220246 | 56 (1.120) | 3 (0.060) | 3/468 | NT | 4.7% | coding (753/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent |
| ? | NC_000913 | = 3220398 | 68 (1.420) | coding (905/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent | |||||
| * | ? | NC_000913 | = 2883773 | 43 (0.860) | 4 (0.080) | 3/472 | NT | 9.1% | coding (366/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | NC_000913 | = 2883880 | 38 (0.790) | coding (259/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
| * | ? | NC_000913 | = 1904291 | 53 (1.060) | 4 (0.080) | 3/474 | NT | 7.7% | coding (397/852 nt) | manZ | mannose‑specific enzyme IID component of PTS |
| ? | NC_000913 | = 1904446 | 44 (0.910) | coding (552/852 nt) | manZ | mannose‑specific enzyme IID component of PTS | |||||
| * | ? | NC_000913 | = 1321172 | 39 (0.780) | 3 (0.060) | 3/466 | NT | 4.8% | coding (213/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | NC_000913 | = 1321496 | 83 (1.740) | coding (1451/1563 nt) | trpE | component I of anthranilate synthase | |||||
| * | ? | NC_000913 | 465084 = | 56 (1.120) | 4 (0.080) | 3/476 | NT | 6.9% | coding (464/696 nt) | queC | 7‑cyano‑7‑deazaguanine (preQ0) synthase; queuosine biosynthesis |
| ? | NC_000913 | 465274 = | 54 (1.110) | coding (274/696 nt) | queC | 7‑cyano‑7‑deazaguanine (preQ0) synthase; queuosine biosynthesis | |||||