New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	5 (0.090)	60 (1.140)	40/386	NT	89.8%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	1209619 =	9 (0.170)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208028‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCA  >  NC_000913/1209619‑1209846                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCCTAACCGGTATAGCTATGAAACCGGTGCGTCCTAACTTAACCGTGCCCGCCTTGACTTTTGTTCCTTC                                                                                                                                                                                                                                                  >  2:567737/1‑228  ATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCATTCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTC                                                                                                                                                                                                                                                >  1:402742/1‑229       TGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAA                                                                                                                                                                                                                                           >  1:547883/1‑229            TGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCATAGGCAGATGCTTTTGCGGCATTCCACCCCCACTTAATGATTACTGATTGCTCAATACCACCAATCATACCCGTCATAGCCATGAAACCGGTGCGGCCTAAACTAGCCGTTACGACATTGAATTTTGTACCTTCCCCCAAACAAAC                                                                                                                                                                                                                                      >  2:346688/1‑229                 TTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGACTGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGCCCTAATTTAACCCTTGCTGCATTTAGTTTTGCGCCCTCTCCCAAACCAACGGTTA                                                                                                                                                                                                                                 >  2:722262/1‑229                 TTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTCATGTAGCCGTTCCTGCATTGGGTTTTGCTCCTTTTCCCAAACCAACGTTTA                                                                                                                                                                                                                                 >  2:634013/1‑229                                                         ACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGACTAGCTATGAAACCGGTGCGTCCTAATGAAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGACAATGAAGAAATAACAAGCAAATGGCATCATTCtttc                                                                                                                                                                                         >  2:511491/1‑225                                                           cCAACCGTGAATTCAACTGTATTTCCACTCCCCACAGAGGCAGATGCTTTTGCGGCATTCCCCCCCCACTGAATGATTACTGATTGCTCAATCCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCT                                                                                                                                                                                        <  1:744601/227‑1                                                             AACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAATTGAAGAAATAACAGGCAAATGGCATCATTCCTGCTTTT                                                                                                                                                                                     >  1:170287/1‑229                                                             AACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGATGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAACCCAACGTTATTGCAAATCAAGCAATAACAAGCAAATGGCATCATTCCTCCTTTT                                                                                                                                                                                     >  2:246526/1‑229                                                                                TTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGCTTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGTGGCGTCCTAATGTAGCCGTTTCTGCATTGAGTTTTGTTCCTTTTCCCAAACCAACGTTTATGCAAAGGAAGAAATAACAAGCAAAAGGAATCATTCCTGCTTTAACCAGGGGGATTTAAAATG                                                                                                                                                                  >  2:268417/1‑229                                                                                    ctTCCCCCCCAGAGGCATATGCTTTTGCGGCTTTCCACCCCCACTGAATGATTACTGATTGCTCAATTCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTA                                                                                                                                                              <  2:52609/227‑1                                                                                    cactCCCCCCATAGGCTGATTCTTTTGCGGCCTTCCACCCCCGCTGAATGTTTACTGCTTGCCCAATTACACCAATCATAACCTGTATAGCTTTGAAACCGTTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTA                                                                                                                                                              <  2:676247/225‑1                                                                                    CATCCCCTCCAGGGGAGTATGCTTTGGCGGCATTCCACCCCCAATGAATGATTCCTGATTGCTCAATTCCCCCAATCATAACCGGTATAGCTATGTAACCGGTGCGTCCTAATGTAGCCGTTGATGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTA                                                                                                                                                              <  1:641982/229‑1                                                                                      TCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGGTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAAGCTaaag                                                                                                                                                            >  2:689311/1‑225                                                                                        CCCCCCAGGGGCGGAGTGTTTTGCGGCATGCCCCCCCCACTGAAAGATTACCGAGGGCTCAATACACGCAAGCATAACCGGTATAGGTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTAGGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGG                                                                                                                                                          <  2:401370/229‑1                                                                                        CCCCCCAGAGGCAGATGCTTTTGCGGCATTCCCCCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGG                                                                                                                                                          <  1:634014/229‑1                                                                                          CCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAACGGATTATTGGCT                                                                                                                                                        >  2:518658/1‑229                                                                                               GAGGCAGATGCTTGTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTA                                                                                                                                                   <  1:518658/229‑1                                                                                                atGCAGATGCTTTTGCGGCATTCAACCCCAACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAACCCAACGTTTATGAAACTGAAGAAATAACATGCAAATGGCATCATTCCTGCATTTACCAGTGGGATTTAAAAATCTTATTGGCTATGTAC                                                                                                                                                  >  2:66600/3‑229                                                                                                       gGCTTTTGCGGCATTCCACCCCCAGTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATC                                                                                                                                           <  1:619863/228‑1                                                                                                         CTTTTGCGGCATTCCACCCCCACTGAATGATTACAGATTGCTCAATTCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATTCTTATTGGCTATGTACGCGTATCAA                                                                                                                                         <  1:346688/229‑1                                                                                                              GCGCCATGCCACCCCCACTGAATGATTACGGTTTGCTCACTCACACAAAACATAACCGGTATAGCTATGAAACCGGTGCGTCCTAAAGTAGCCGTTGCTGTATTGAGTATTGCGCCTTCGCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                    <  2:650112/229‑1                                                                                                               cgcCATTCCACCCCCACTGAATGATTACTGATTGCTCAATTCCACCAATCATTACCGGTATAGCTTTGAAACCGGTGCGTCCTAATGTAGCCGTTGCTTAATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                    <  2:755309/225‑1                                                                                                                 gccTTCCCCCCCCTCTGTAGGATTCATGATTGCTCAATGCCCCCAATCATACACGGTATAGCTAGGAAACCGGTGCGGCCTAATGTAGCCGTTGCAGCAATGATGTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                 <  2:278340/226‑1                                                                                                                    gTCCCCCCCCATCGAATGATTACTGATTGCTCAATCCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCA                                                                                                                               <  1:567738/227‑1                                                                                                                      cccCCCCCTCTGAATGATTACTGATTCCTCAATACCACCAATCATAACCGGTATAGTTATTAAACCGGTGCGTCCTAATGTGTACGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAA                                                                                                                            <  2:626464/226‑1                                                                                                                      cccCCCCCACTGTATGATTGCTGATTTCTCAATACCACCAATCATAACCGGTAGAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTGCCAGGGTGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCATAA                                                                                                                            <  1:153293/226‑1                                                                                                                        ACCCCCATTTAATTATTACTGATTGCTCAATTCCATCAATCATAACCGGTATAGCTTTGAAACCGGTGCGTAATAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATAAAAAAGAAGAAATAACTAGCCAATTGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                          <  1:99478/229‑1                                                                                                                          CCCCAGTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTCCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACAC                                                                                                                         <  1:722263/228‑1                                                                                                                                 GAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAATTAACAAGCAAATGGCATCATTCCTGCTTTTACCAGCGGGATTTAACATGCTTATTGGCTATGTACGCGTATCCACAAATGTCCCAAACACAGATCTAC                                                                                                                 >  1:331983/1‑229                                                                                                                                 GAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAAAAAATAACCAAAACACAAATCTA                                                                                                                  >  2:77913/1‑228                                                                                                                                  AATGGTTACTGATTGCTCAATTCCACCAATCATAACCGGTAAAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACA                                                                                                                <  1:104911/229‑1                                                                                                                                       tttCTGAATTCTCAATGCCACCAATCATAACCGGTATAGCTATTAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTA                                                                                                           <  1:470372/226‑1                                                                                                                                       TTACTGCTTGCTCAATACCGCCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTA                                                                                                           <  1:268417/229‑1                                                                                                                                       TTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAACTGAAGAAATAACAAGCAACTGGCATCCTTCCTGCTTTTACCAGGGGTATTTGACATGCTTATTGGGTCTTTACGCGTACCAACAACAGACACGAAAACACATCTAacacga                                                                                                            >  2:138409/1‑222                                                                                                                                              TTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATTAACAAATGCCCAGAACAACGATTTACAACATAATCCGC                                                                                                     >  2:470372/1‑228                                                                                                                                                 caCAATACCCCCAATCATAACCGGTATTGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAA                                                                                                 <  1:246526/227‑1                                                                                                                                                  ccaattaCACCAATCATAACCGGTATAGCTATGAAACCGGTTCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAC                                                                                                <  1:23247/222‑1                                                                                                                                                  cCAATCCCCCCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAC                                                                                                <  1:511491/228‑1                                                                                                                                                     ATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTCCTTTTAACAGGGGGATTTAACAAGCTTATTGGCTATGTACGCGTATCAAAAAAAGACCCAAACAAAGATCTACAACGTAAGGCGCTGGACTGT                                                                                             >  2:707844/1‑229                                                                                                                                                     ATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTCTATGAAACTGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGTGGACTTAACATGCTTATTGGCTATGTCCGCGTTTCAACAAGATCCAAGAACAAAGACTCACAACGTAATGCGATGAACTGT                                                                                             >  1:352762/1‑229                                                                                                                                                           CCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTC                                                                                                                                                                                             >  2:143669/1‑127                                                                                                                                                           CCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTACATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTC                                                                                                                                                                                             <  1:143669/127‑1                                                                                                                                                                     CCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                    <  2:55210/174‑1                                                                                                                                                                     CCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                    >  1:55210/1‑174                                                                                                                                                                         TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAG                                                                                                                       <  1:504042/183‑1                                                                                                                                                                         TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAG                                                                                                                       >  2:504042/1‑183                                                                                                                                                                         TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGC                                                                                                                                                                                         <  1:192229/117‑1                                                                                                                                                                         TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGC                                                                                                                                                                                         >  2:192229/1‑117                                                                                                                                                                             gtTATGAAACCGGTGGGTCCTAATTTAGCCGTTGCTGCATTGAGTTTGGCACCTGCTCCCAAAACAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCGGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAA                                                                    <  2:272859/227‑1                                                                                                                                                                             GCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAA                                                                    <  1:77913/229‑1                                                                                                                                                                                ATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAGTGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTAACCAGGGGGATTTAACATGCTTATTGGCTATGCACGCGTATCAACAAATCACCCAAACACATATCTAAAACGTAATGCGGTGAACTGTCA‑AGGAGTCGAACTGATTTTTGAAacc                                                                 >  2:640435/1‑226                                                                                                                                                                                ATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGTACCAGAACAACGCTCTCCAACGTAATGCGCTGACTTGAGC‑AGGACATGAGCAAATTTTTGAAAAC                                                                 >  2:520131/1‑229                                                                                                                                                                                ATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATAAAAATGAGGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAACAAATGACCAGAACACAGATCTCCAACGTAATGGACTAAACTGTGA‑AGAATGCGAGCTGATTTTTGAAaaa                                                                 >  2:32281/1‑226                                                                                                                                                                                   AAACCGGTGCGTCCTAATGTAGCCGTTACTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTAATGAAAATGAAGAACTAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACTCGTATCAACAAATGACCAGAACCAATATCTCTAACTCAATCCGCTG‑ACAGAGCAAGGATGCGAACTGATTTTTAAAAAAAAG                                                              >  2:48968/1‑229                                                                                                                                                                                         GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAATGACCAGAACACAGATCTCAAACGTAATGCGTGAAACTGGCA‑AGGATGCGACCAAATTTTTTAAGAAAAGAAAAa                                                         >  2:53976/1‑227                                                                                                                                                                                         GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAG                                                         >  1:631943/1‑228                                                                                                                                                                                         GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATACGAGCTGATTTTTGAAGACAAGATAAG                                                         >  1:537173/1‑228                                                                                                                                                                                         GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTGCTCCCAAACCAACGTTTATGAAAATGAGGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCCGGAGGATTTAACATGCTTATTGGCTACGTACGCGTATACACAAATGACCAGAAAACAGATCTACACCGTAATGCGCTGAACTGTTC‑AGGATACGAGCAAATTTTTCAAAACAAaacaaa                                                         >  2:328456/1‑222                                                                                                                                                                                              TCCTAATGTAGCCGGTGCTGCATTGAATTTTGGTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTGACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGAAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCAC                                                   <  1:138409/229‑1                                                                                                                                                                                                        GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCAGGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCG                                           >  1:553994/1‑227                                                                                                                                                                                                          CGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCACCAAATGACCAGAACACAGATCTACAACGAAATGCGCTGAACTTGGC‑AGGATACGAGCTGATTTTTGAAGACAATATAAGGGTCACAAAGACCCAAAG                                       >  2:89574/1‑229                                                                                                                                                                                                                ctCATTGAGTTTTGCTACTTTTCCCAAACCAACGTTTAAGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGCCAAGATAAGCGGCACAAAGCCCGAAAGGCCGGG                                 <  2:418834/227‑1                                                                                                                                                                                                                            TGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGACCTGTGC‑AGGATGCGAGCTGATTTTTGACAACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAAag                     >  2:26426/1‑227                                                                                                                                                                                                                               tcctgtcCCCAAACATACGTTTATGAAAATGAAGAAATAAAAAACAAATGGGATCATTCCTGGTTTTACCAAGGGGATTTAACATGGTTATTGGCTATGTACGCGTAGCAACAAATGACCAGAACACAGATCTACAACGTAATGCGGTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                  <  2:402742/222‑1                                                                                                                                                                                                                               cCCTTCTCCCAACACAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                  <  1:667615/228‑1                                                                                                                                                                                                                               TCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                  <  1:642769/229‑1                                                                                                                                                                                                                               TCCTTCCCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                  <  1:437396/229‑1                                                                                                                                                                                                                                               ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCCCAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCA  >  2:219036/1‑229                                                                                                                                                                                                                                               ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                          >  2:137153/1‑110                                                                                                                                                                                                                                               ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                          <  1:137153/110‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208028‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC‑AGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCA  >  NC_000913/1209619‑1209846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.