| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,325,980 | A→T | 16.0% | Y412F (TAC→TTC) | yciQ → | enhancer of membrane protein expression; putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,325,980 | 0 | A | T | 16.0% | 125.1 / 2.2 | 58 | Y412F (TAC→TTC) | yciQ | enhancer of membrane protein expression; putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (10/38); new base T (8/2); total (18/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTAT > NC_000913/1325754‑1326201 | ggggcgtcagaaaaTAACTCGCTATTCCGGCCCGAAGAGCAGTTATGACGGGAAGGGTTTCTGCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTGACGCAGGGCATTTTTACGGATGCAGAAATTTTTTCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGTGGTGGACTGGCAATATTGGCGGTCATTCATTACg < 2:563797/218‑1 (MQ=255) cgcgACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGt < 2:102499/229‑1 (MQ=255) ccAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTAGTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACtt < 1:377261/229‑1 (MQ=255) tGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACTGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATCCTTTTTTGCACTGGGGTGGACTTGCAACATTGGCGGTCCTTTTTTTCTGTTACTTTTGTccgcta > 2:678818/1‑225 (MQ=255) tGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCTTCTTTATGGTAACTTGAGTACTGTa > 1:431849/1‑229 (MQ=255) gggTATTAGCTCCCACAGAGCAGTTATTTCGGGGAACGTTTTTTCGTAAAGGCGATAAGGTCGTTATGACGGGGAGACGCATCAGCGTCGTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTTCCGGGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAgg < 2:488943/228‑1 (MQ=255) cGGTATTACTGCCCGCAGAGCAGTTAGTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAgg < 1:458476/229‑1 (MQ=255) tGCCCGCAGGGGTGTTAATACCGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCGTAAGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAgg < 1:333427/229‑1 (MQ=255) cccGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGAGGACTGGCAATATTCGCGGTTGTTCTTTACTGTCAATTTAGTCGCGTTGG‑ATggggatggg > 2:513856/1‑223 (MQ=255) ccGCAGAGCAGTTAATACTGGAAGGGTTATTTCGTGAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTGGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGaa < 1:294422/228‑1 (MQ=255) cagCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGaa < 1:392196/226‑1 (MQ=255) cGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTTTTTACTGTAACTTGAGTTCTGTTGG‑CTTGGCAGGagag > 1:691082/1‑226 (MQ=255) taCTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGGAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTTTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCg < 1:383777/228‑1 (MQ=255) tcTGGCAGCGTTATTTCGGAAGGGTGATTAGGGCGTTCTTACGGGGAGACGCAACGAGGTTGTACGAAGGGGATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATTGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGa < 2:34773/227‑1 (MQ=255) aCTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGc < 1:499758/207‑1 (MQ=255) cTGGAAGGGTTTGTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAATTTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACGGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGat < 1:638718/228‑1 (MQ=255) cTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGat < 1:199583/228‑1 (MQ=255) acgctttATTCTGTAAAGGCGATCAGGTCGGTCTTACGGGGAGACGCAACCGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGACGGGTAAAAAGTTTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGt < 2:406366/223‑1 (MQ=255) aaGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTggg < 1:220851/201‑1 (MQ=255) tttttttGTAAAGGGCATAAGTGTGTTTTGTCGGGGGGACGAAACCGTGTTTTTCCCAGGGCATTTTGACGGCTGCAAAAATTTTATCTGCCGCGTAAAAAGTCTTCATTTGACCGGTCTGATAC‑‑TGTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGTATGATTCTGGTGGGCGATATGTTTATTATg < 2:255530/226‑1 (MQ=255) ttttggttAAAGG‑GATTAGGGCTTTTTTACGGGTGGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCATAAATTTTATCGGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGTTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATg < 2:250114/222‑1 (MQ=255) ttttCCTAAAGGCGAAAAGGTCGTTCTTGCGGGGGAACTCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATg < 2:431849/228‑1 (MQ=255) tattAAAGGCGATAAGGTCGTTCTTACGGGGAGATGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGAt < 1:726699/225‑1 (MQ=255) cGTAAAGGCGATAAGGTCGTTCTTACGGGGCGACGCAACAGAGTCTTACGGAGGGGATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTC‑TTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATctg < 1:480942/229‑1 (MQ=255) ggggAGACGCAACAGAGTTTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGGGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTg < 2:685931/228‑1 (MQ=255) agaCGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCTTCTTTACGGTAACTTTAGTCCTGTAGG‑CTGGGCTGGGATGGGGCTGGTGGGGGGTATGTTTATTTTGGTCTTCTGGGTTATTTCCTTTTTTTTTTTTTTcc > 1:431217/1‑229 (MQ=255) agaCGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACCGTAAATTTAGTCCCGTGAG‑CTGGGCAGGAATGAGTTTCGGGGGCGCTATGGTTATTATTGTCTGGTGGATTT‑TTCCTTTTTTATTTTTTTgcc > 1:722660/1‑229 (MQ=255) agaCGCAACAGAAGCTTACGCAGGGCATTTTGACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTGTGCAATGGGGTGGACTGGCAATATTGGCGGGCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTccc < 1:625808/229‑1 (MQ=255) aCGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGGCATCCTTTTCGGTGAATTGAGGCCTGTAGGTCTGGG‑AGGGCTGAGTTTGGGGGGCGCGATGGTTATTTTGAGTTGGTGTGTTT‑TTCATTTTTTTTTTTTTTTCCtt > 2:522511/1‑229 (MQ=255) tACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTTAGTCCTGTAGG‑CTGGGCAGGAATTAGTCTGGTTGGTGATATGTTTATTATGTTCTGTCGGATTT‑TTCCTTTTTTTTTTTTTTCCCTTTTGCCttttttttt > 1:215317/1‑227 (MQ=255) cGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGGGATATGTTTATTTTGATCTTCTGGGTTA‑TTCCTTTTTTTTTTTTTTCCCTTGTGCtttttgtttccc > 1:221959/1‑221 (MQ=255) aGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGGCATTTTTTTTCGGAAATTTAGTTCTGTAGG‑CTGGGCAGGGATGAGTCTTGTGGGGGATTTGTTTTTTTTTTTTGTTTGGGTTA‑TTTATTTTTTTTTTTTTTTCCTTTTGGtttttttttttcccg > 2:664335/1‑222 (MQ=255) ggCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAACGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTTATTTTTTATTGTTACTTGAGTCCTTTGGG‑CTGGGCAGGGATGAGTTCTGTGGGGGATTTTTTTATTTTGGTCTTCCTGGTTA‑TTTCTTTTTTGTTTTGTTTCCCTGAGATTTTTTTTTCCcgtgtt > 1:359071/1‑225 (MQ=255) ggCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCCATCTTTTCTGTGACTTGAGGCCTGTAGG‑CTGGGCAGGGATGGGGCTGGTTGGCGATATGTTTTTTTTGTGTTTGTGGGGTA‑TTCCTTTTTTTTTTTTTTCCCTTTTGTTtttttttgtcgcgc > 2:115767/1‑221 (MQ=255) ggCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTTAGTCCTGTAGG‑CTGGGGAGGAATGAGTCTGGTGGGCGGTATTTTTATTTTGTTCTTCTGGGTTT‑TTCCTTTTTTTTTTTTTTTCCTTTGGCTTTTTTTTGCCcccgg > 1:161042/1‑227 (MQ=255) ggCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTTAGGCCTGTTGG‑GTGGGCAGGAAATAATCTGGGGGGCGGTATGTTTATTATTGTTTTGTGGGTTATTTCTTTTTTTATTTTTTTCCTTTGGCTTTTTGTTGGccccgg > 1:697396/1‑225 (MQ=255) ttttTCGGATGCAGAATTTTTTTCTGCCGGTTAAAAAGTCTTCGTTTTACCGGTCTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGAtgatga < 2:221959/229‑1 (MQ=255) ttttCGGGTGCAAAAATTTTATCTGCCGGGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGAAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGAc < 2:522977/229‑1 (MQ=255) cttACGGATGCATAAATTTTAGCTGTCGCTTAAAAAGTTTTCGTTTTACCGGTCTTATACTTTTTTGCAATGGGGTGGACTTGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGA‑CTTGGCAGGAATGAGTCTGGTGGGCTATATGTTTATTATTATCTGCTGTATTA‑TTCCTTTTTTATTTTGTTCCCTTGTGCTTTTGTTTGCCCGCGatgatgtc < 1:667230/228‑3 (MQ=255) aTGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTAGCGGTCTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCt < 1:743399/228‑1 (MQ=255) tttttcggcgtgTAAAAAGTTTTTGTTTTACGGGTCTGATGCTTTTTGGCAATGGGGTGGACTGGCAATAGTGGTGGTCATTCTTTACGGTAGTTTGAGTCCTGTAGT‑CTGCGGCGGAATTAGTCTTGTAGGTGTTATGTTTATTATGTTCTGATTGATTA‑TTCCTTTCTTATTTTGTTCCCTTGACCTTTTGTTTGCCTTCGATGATGACAAGCCTTGCGTTAATCgt < 2:163285/218‑1 (MQ=255) cgcgTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTCTGGAACTTGAGTCCTGTAGG‑CGGGGCGGGGATGAGGTTGGTGGGCGATATGTTTTTTTTTGTCTTCGTGGTTT‑TTCCTTTTTTATTTTTTTCCCTTTAGGTTTTGTTTGTCCCCGGTGATTAAACACCTTTCGTTTATTGTTTatttat > 2:13818/1‑224 (MQ=255) ttttCGTTTTACCGGTCTGATTCTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGtttt < 1:664336/227‑1 (MQ=255) ttCGTTTTACCGGTCTGATTCTTTTTTGCAAGGGGGTGGACTTGAAATAGTGGCGGTTATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGttttt < 1:678819/228‑1 (MQ=255) ttCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTTTGGGAAATTGGGTCCTGGGTG‑GTTGGGAGGAATGAGTATGGTGGGCGATTTGTTTTTTTTGATCTTGTGGGTTA‑TACCCTTTTTTTTTTGTTTCCCTGTGCTTTTGTTTGTCCGCGTTGATTGCAAGTGTTTTGCTTAACGTGTAATACTACCTTTGTTTTTa > 2:339540/1‑229 (MQ=255) cctgttttatatTTTTTTGGAATGGGGGGGACTGGCAATTTGGGGGGTCATTCTTTACGGTAACTTGAGTCCGGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGAt < 2:215317/220‑1 (MQ=255) ttttttGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGGAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTg < 2:159604/229‑1 (MQ=255) ttttGCAATGGGGTGGACTGGCAATATTGGCGGTTAATCTTTTCGGTTACTTTGGTCCTGTAGG‑GCGGGGAGGGATAGGTCTGGGTGGCGGTATGTTTTTTTTTATTTGCTGGGTTA‑TTTCTTTTTTTTTTTTTTTCCTTTAGGTTTTTTTTTCCCGCGAGTATGGAAAGCCTTTCTTTTATCTATGAATTATTCCTTTGTTTTTTTCACCGCTTTTTTCatggggg > 2:724709/1‑221 (MQ=255) ttttGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAAATTGAGTTCTGTAGG‑CTGGGCAGGAATGAGGTTGGTGGGCGATATGTTTATTATGATCTGCTTGATTG‑TTCCTTTTTTATTTTGTTCCCTTGTGCTTTTGTTTGCCCGCGTTGATGTCAAGCCTTTCGTTTATCGTGTAATCCTCACTTTGTTTTTTCACCTGATTTGTTCAGTCGTGGc > 1:746826/1‑229 (MQ=255) tGCAATGGGGTGGACTGGGAATATTGGTGGTTATTCATTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGTAATGAGTATGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCTTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCtt < 1:320508/229‑1 (MQ=255) tGGGGTGGACTGGCAATTTTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTAtt < 1:522511/229‑1 (MQ=255) gggTGGTCTGGCAATTTTGGCGGTTGTTTTTTTGGGTAACTTGAGTCCTGTTGG‑CTGGGCAGGAATTGGTCTTGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATtct < 2:359071/229‑1 (MQ=255) gggTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑TTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATtct < 1:534385/229‑1 (MQ=255) tGGAAATATTGGGGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTTTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACAt < 1:11208/229‑1 (MQ=255) tGGCGGTCATTCTTTACGGTAACTTGGTTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGTGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCg < 1:513856/228‑1 (MQ=255) tGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTTGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTGAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCg < 1:149521/228‑1 (MQ=255) taTTCTTTACGGTAATTTGAGTCCTTGAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTa < 2:161042/228‑1 (MQ=255) aTTCTTGTCGGTACCTTTAGTTCGGTAGG‑CTTGGCAGGAAGGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑GTCCTTTTTTATTTTGTTCCCTTGAGCTTTTTTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCCCTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTAt < 1:596927/229‑1 (MQ=255) | GGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGG‑CTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTA‑TTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTAT > NC_000913/1325754‑1326201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |