| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,110,523 | T→C | 7.0% | E166G (GAA→GGA) | rfbA ← | glucose‑1‑phosphate thymidylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,110,523 | 0 | T | C | 7.0% | 183.3 / 4.1 | 57 | E166G (GAA→GGA) | rfbA | glucose‑1‑phosphate thymidylyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (25/28); new base C (2/2); total (27/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01 | |||||||||||
ACGAAATGCAATCTCTTCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGATTCAGGCCCCACTGGCT > NC_000913/2110240‑2110806 | aCGAAATGCAATCTCTTCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAAc < 1:41269/289‑1 (MQ=255) aTGCAATCTCTTCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGttt < 1:793248/289‑1 (MQ=255) tGCAATCTCTTCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGtttt > 1:70677/1‑289 (MQ=255) ttCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGATTCACGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGCTCTACCGGTTTTTCTTCCAg > 1:301815/1‑288 (MQ=255) gaAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGcca > 2:619574/1‑288 (MQ=255) gaAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCg > 1:35364/1‑289 (MQ=255) gaAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCAACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACATGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCg > 1:301141/1‑289 (MQ=255) aaaCCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTg < 2:35364/285‑1 (MQ=255) ggCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCaaa > 2:467487/1‑289 (MQ=255) tctTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCaa < 1:346726/289‑1 (MQ=255) ctTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCaa > 1:522063/1‑288 (MQ=255) tCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGa < 2:70677/289‑1 (MQ=255) gCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCa > 1:54112/1‑270 (MQ=255) gCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCa < 2:54112/270‑1 (MQ=255) aaTCAAATTACTTGTTCCTGTCAGAGTCTGCAGGATCCCCTTGTCCCTCCACCCTGAGCCACTCCTCATTCTCGCGACAGACAGACTTCCCTGTTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGAGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGTCCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTTCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGt < 2:301815/289‑1 (MQ=255) cTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATa > 2:600882/1‑275 (MQ=255) cTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATa < 1:600882/275‑1 (MQ=255) cTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAAc > 1:354485/1‑289 (MQ=255) tCTATCAGACTCTGATGAGTCCCCGTGGCCAGCCACGCGTAGCCACGCACCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATGATAAAAGTACAGACCTGTAACGGCGTAATGACTCTTTGGTTCTAACGGTTCTTCTTCCAGACTGATTGCCGTACCGTTTTTATCACACTCAACGACACCAAAGCGTTCTGGTCCAATAACGt > 2:734408/1‑289 (MQ=255) cAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAg < 1:467487/289‑1 (MQ=255) ctctGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCaa > 2:241856/1‑289 (MQ=255) tctGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCaaa < 1:636283/289‑1 (MQ=255) gTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGtt < 2:522063/288‑1 (MQ=255) tCCCCGTGTCCAGCCCCGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTa < 2:682787/266‑1 (MQ=255) tCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCa < 2:320446/233‑1 (MQ=255) tCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCa > 1:320446/1‑233 (MQ=255) tCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTa > 1:682787/1‑266 (MQ=255) tgtCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGGTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATa < 1:85236/244‑1 (MQ=255) ccAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCActttc < 1:241856/289‑1 (MQ=255) catcatCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCAtt > 1:344136/1‑289 (MQ=255) cGTCCCTGCTCAAGATAAATACGTTTAACATCTGTACTTGCTACCTCACCACGTGCATACGTCTTCAAGTTTTTCGCCATCTGAACCCCGTCGTTATCATAAAAGTACAGACCTGTAACGGCTTAATTACTCTTTGCTTCTAACGGTTTTTCTCCCAGACTGATTGCCGTCCCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGTATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGa < 2:301141/288‑1 (MQ=255) cGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGt < 1:900537/286‑1 (MQ=255) cGTCCCTGATAAAGATAAATACGGTTAATATCTGTAATTGCTAACTCACCACGTTCAGACGGCTTCAAGTTTTTCTCCATCTGAACAACGTCGTTATCATAAAAGTACAGACCTGTAACGTCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGt < 2:835108/286‑1 (MQ=255) tGTAATTTATAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACAACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTCTTTCTTCCAGAATGATTGCCGTACCGGCTTTATAAAACTCAAAGACCCCATAGCGTGCCGGATTCTTACTGTGATAGGCAAATACCGTTGCACCACTTTCTTTGCTAACAGCGGCACCCTTTACCTCCGGCCGATCGTCACCTTAAAATATATCATCAcaacaacacaccgc > 2:492621/1‑275 (MQ=255) tAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGCCTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATATCGTTCTGGATCATTAACGTGATAGGTAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGACTCCATTAGCTTCGGCCGATCGATACCGTAAAAGAGTTTACCCCCAAGAACCCAAGaaca > 2:398491/1‑289 (MQ=255) tAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTAGCACCACTTTCTTTGTTAACTGCGTCCTCCATTAGCTTCGGCAGATTGTGACCGTAAAAGAAATTATCCACAAGAAcacacccaaa > 2:50019/1‑280 (MQ=255) tttCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCCACGACACCATAGCGTTCTg < 1:674050/171‑1 (MQ=255) cTAACTCACCACTTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTGTTTATCAAACTCAACGACACCATAGCGTTCTGGGTCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAatcatc < 2:272025/289‑1 (MQ=255) accacGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACCCCATAGCTTTCTGGAGCATTAAc > 2:674050/1‑171 (MQ=255) accacGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATa > 2:728906/1‑153 (MQ=255) accacGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATa < 1:728906/153‑1 (MQ=255) acGTGCAGACGGCTTCAAGTTTTTCGCCATCTTAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCGGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCGTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATa < 1:529551/289‑1 (MQ=255) gTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCGTTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATaaa < 1:184317/289‑1 (MQ=255) cTTCAAGTTTTTCGCCATCTGAACCACGTCTGTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTTATAGGCAAATACCGTTGCACCACTTTCTGTGTTaa < 1:246936/194‑1 (MQ=255) ttCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACTGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTAGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCga < 1:50019/289‑1 (MQ=255) ttCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCGAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCtt < 2:202926/283‑1 (MQ=255) ttCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCtt > 1:202926/1‑283 (MQ=255) tacGCCATATGAACCACGTCGTTATCATAAACGTACAGACCTGTAACGGCGTAATCACTCTTTGGTTCTAACGTTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCTATCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTACCAGCGGCCTc > 2:246936/3‑194 (MQ=255) cgtcgtTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCCAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATAATCACCACCAATAAACCATTCACCGATGATAAATGCCTGCGAGAGGCCac > 2:19170/1‑287 (MQ=255) tAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTCCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTGGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGtt > 2:549047/1‑289 (MQ=255) aCAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGATTGCACt < 1:19170/287‑1 (MQ=255) aCCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGt > 1:22689/1‑287 (MQ=255) tGTAACGGCGTAATTACTCTTTGTTTCTAACGGTTTCTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACAGCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGAACGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACGCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGa < 1:492621/289‑1 (MQ=255) cGGCGTAATTACTCTTTGGTCCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTGGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGAtt < 1:549047/289‑1 (MQ=255) ctTTGGTCCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGATTCAgg < 2:18865/280‑1 (MQ=255) ctTTGGTCCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGATTCAgg > 1:18865/1‑280 (MQ=255) tGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGATTCAGGCCCCACTGGCt > 1:281840/1‑288 (MQ=255) | ACGAAATGCAATCTCTTCAGGACAGGAAACCTTCAATCCCTGGCGCTCTTCAATTGTCGCAATAAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACCATAGCGTTCTGGATCATTAACGTGATAGGCAAATACCGTTGCACCACTTTCTTTGTTAACAGCGGCCTCCATTAGCTTCGGCAGATCGTGACCGTAAAAGATATTATCACCAAGAACCAAAGCACAATCATCACCACCAATAAACTCTTCACCGATGATAAATGCCTGCGCGAGGCCATCTGGGCTAGGTTGCACTTTGTACTGAAGATTCAGGCCCCACTGGCT > NC_000913/2110240‑2110806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |