mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3955668 = | 278 (1.710) | 5 (0.030) | 4/486 | NT | 1.9% | coding (338/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic; also known as threonine deaminase |
| ? | NC_000913 | 3955897 = | 261 (1.660) | coding (567/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic; also known as threonine deaminase | |||||
| * | ? | NC_000913 | = 3135413 | 199 (1.230) | 3 (0.020) | 3/484 | NT | 1.6% | coding (959/1500 nt) | pitB | phosphate transporter |
| ? | NC_000913 | = 3135486 | 185 (1.180) | coding (886/1500 nt) | pitB | phosphate transporter | |||||
| * | ? | NC_000913 | 2796365 = | 147 (0.910) | 4 (0.030) | 4/482 | NT | 2.7% | coding (422/450 nt) | ygaU | uncharacterized protein |
| ? | NC_000913 | 2796386 = | 144 (0.930) | coding (401/450 nt) | ygaU | uncharacterized protein | |||||
| * | ? | NC_000913 | 2496403 = | 159 (0.980) | 3 (0.020) | 3/478 | NT | 2.2% | coding (759/921 nt) | lpxP | palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| ? | NC_000913 | 2496811 = | 111 (0.720) | intergenic (+246/‑110) | lpxP/ypdK | palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase/inner membrane protein | |||||
| * | ? | NC_000913 | 1643615 = | 182 (1.120) | 3 (0.020) | 3/482 | NT | 1.7% | coding (690/1050 nt) | ydfU | Qin prophage; uncharacterized protein |
| ? | NC_000913 | 1643805 = | 170 (1.090) | coding (500/1050 nt) | ydfU | Qin prophage; uncharacterized protein | |||||
| * | ? | NC_000913 | = 857575 | 123 (0.760) | 3 (0.020) | 3/478 | NT | 2.4% | intergenic (+20/+221) | ybiT/ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| ? | NC_000913 | = 857580 | 122 (0.790) | intergenic (+25/+216) | ybiT/ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein | |||||
| * | ? | NC_000913 | = 226466 | 133 (0.820) | 3 (0.020) | 3/498 | NT | 2.2% | noncoding (708/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 226471 = | 132 (0.820) | noncoding (713/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||