mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 15 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3923705 = | 170 (1.150) | 4 (0.030) | 4/474 | NT | 2.4% | intergenic (‑25/+39) | rsmG/mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| ? | NC_000913 | 3923733 = | 163 (1.160) | intergenic (‑53/+11) | rsmG/mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 | |||||
| * | ? | NC_000913 | = 3349892 | 112 (0.760) | 3 (0.020) | 3/466 | NT | 2.8% | coding (568/654 nt) | elbB | isoprenoid biosynthesis protein with amidotransferase‑like domain |
| ? | NC_000913 | = 3349876 | 107 (0.780) | coding (584/654 nt) | elbB | isoprenoid biosynthesis protein with amidotransferase‑like domain | |||||
| * | ? | NC_000913 | = 3217375 | 134 (0.910) | 4 (0.030) | 4/482 | NT | 2.7% | coding (597/624 nt) | yqjI | PadR family putative transcriptional regulator |
| ? | NC_000913 | = 3217419 | 154 (1.080) | intergenic (+17/+137) | yqjI/aer | PadR family putative transcriptional regulator/fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component | |||||
| * | ? | NC_000913 | 2873905 = | 146 (0.990) | 3 (0.020) | 3/478 | NT | 2.1% | coding (88/606 nt) | cysC | adenosine 5'‑phosphosulfate kinase |
| ? | NC_000913 | 2873930 = | 133 (0.940) | coding (63/606 nt) | cysC | adenosine 5'‑phosphosulfate kinase | |||||
| * | ? | NC_000913 | = 2791414 | 129 (0.880) | 4 (0.030) | 4/484 | NT | 3.1% | coding (142/1449 nt) | gabD | succinate‑semialdehyde dehydrogenase I, NADP‑dependent |
| ? | NC_000913 | = 2791421 | 127 (0.890) | coding (149/1449 nt) | gabD | succinate‑semialdehyde dehydrogenase I, NADP‑dependent | |||||
| * | ? | NC_000913 | 2765420 = | 99 (0.670) | 3 (0.020) | 3/410 | NT | 3.2% | intergenic (‑267/+93) | yfjL/yfjM | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein |
| ? | NC_000913 | = 2765411 | 99 (0.820) | intergenic (‑258/+102) | yfjL/yfjM | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein/CP4‑57 prophage; uncharacterized protein | |||||
| * | ? | NC_000913 | = 2508694 | 147 (1.000) | 3 (0.020) | 3/478 | NT | 2.0% | coding (733/966 nt) | glk | glucokinase |
| ? | NC_000913 | = 2508732 | 148 (1.050) | coding (695/966 nt) | glk | glucokinase | |||||
| * | ? | NC_000913 | 2320497 = | 162 (1.100) | 3 (0.020) | 3/484 | NT | 1.8% | coding (455/1827 nt) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC |
| ? | NC_000913 | 2320592 = | 164 (1.150) | coding (550/1827 nt) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC | |||||
| * | ? | NC_000913 | = 2310321 | 131 (0.890) | 3 (0.020) | 3/482 | NT | 2.3% | coding (85/1065 nt) | ada | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase |
| ? | NC_000913 | = 2310327 | 132 (0.930) | coding (79/1065 nt) | ada | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase | |||||
| * | ? | NC_000913 | = 1735204 | 146 (0.990) | 4 (0.030) | 4/484 | NT | 2.7% | coding (770/816 nt) | mepH | murein DD‑endopeptidase, space‑maker hydrolase |
| ? | NC_000913 | = 1735210 | 142 (0.990) | coding (776/816 nt) | mepH | murein DD‑endopeptidase, space‑maker hydrolase | |||||