New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2553462	147 (0.880)	3 (0.020)	3/496	NT	2.0%	coding (238/900 nt)	hemF	coproporphyrinogen III oxidase
	?	NC_000913	= 2553468	149 (0.920)					coding (244/900 nt)	hemF	coproporphyrinogen III oxidase
Rejected: Frequency below/above cutoff threshold.

TTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2553173‑2553462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCAG  <  NC_000913/2553468‑2553182                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCG                                                                                                                                                                                                                                                                                                  >  1:1346589/1‑289   ATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGATCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCCGCGGCGGGCGGAGTCGGGTGTTGAGTAATGGGGGAGTCTTCGAACAGGGAGGCGTCAACTTTTCGCACGTCACCGGTAAGGTGATGCCGGCTACCGCCACCGGTCATCGCGCGG                                                                                                                                                                                                                                                                                                 >  2:375693/1‑288                                                                                                                                                                                                                                                CGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCAT                                                                                                                                                                                                    <  1:54339/144‑1                                                                                                                                                                                                                                                CGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCAT                                                                                                                                                                                                    >  2:54339/1‑144                                                                                                                                                                                                                                                                                     CGCTCATCGCCCGGCAAGTTCCGGGCGATGAGCGCTGGCGGAAGCAGGCATCGCCTCACCGTGGACAGGCGCAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGCCTACGCCCGCGGCCACCACCTACGCGATGCCAACTATATTCGCCAAATTCTGCGCCACCGACGGCGGTCGGCCGCTTACACATCGGATCCTGAAGGTTGCGCAGAAACAGTTTGACCTGGTTTGGGTCGGGTTTCATAACTTATCGCTTTTGCGAATGTGCTTACTGG              >  2:989492/1‑289                                                                                                                                                                                                                                                                                            CGCCCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGATGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCG                            >  1:1567606/1‑268                                                                                                                                                                                                                                                                                            CGCCCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGATGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCG                            <  2:1567606/268‑1                                                                                                                                                                                                                                                                                            CGCCCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGA       >  1:472881/1‑289                                                                                                                                                                                                                                                                                               CCGGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAAC     <  1:1099438/288‑1                                                                                                                                                                                                                                                                                               CCGGCAAGGTCGGGGCGATGAGCGGTGGCGAAACCAGGCACCGCCTCACAGTGGACAGGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCGGACTACGCCCGCCGCCGCCAGCTTCGTTCTGCCAACTAGCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGTAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAAC     <  2:995690/288‑1                                                                                                                                                                                                                                                                                                CGGCAAGTTCCGGGAGATGGGCTGTGGCGTAAGCAGGCATCGCCGCACCGTCGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACCCCACCATTACGCCACACCCGACTACCCCCGCCGCCGCCGGCTTCGCGCTGCCAACGAACTTCGACAAATTCTGCGCCATCGACGGCCGTCAGCTGCTGACAAATCGTATCCTGAATGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGCGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCA   <  2:450310/289‑1                                                                                                                                                                                                                                                                                                CGGCAAGTGCCGGGCGATGAGCGGGGGCGGAAGCAGGCATCGCCTCACCGTGGACAGGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCA   <  1:1069734/289‑1                                                                                                                                                                                                                                                                                                CGGCAAGGTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGACTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCA   <  2:391525/289‑1                                                                                                                                                                                                                                                                                                 GGCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCAG  >  1:64948/1‑289                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2553173‑2553462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggCAAGTTCCGGGCGATGAGCGGTGGCGGAAGCAGGCATCGCCTCACCGTGGACATGCGAAAAGTTGACGCCTGCCTGTTCGAAAACACCACCATTACGCAACACCCGACTACGCCCGCCGCCGCCAGCTTCGCGCTGCCAACTATCTTCGACAAATTCTGCGCCATCGACGGCGGTCAGCTGCTGACAAATCGTATCCTGAAGGTTGAGCAGAAACTGTTTAACCTGGTGTGCGTCGGGTTTCATAACTTATCGCTTTTTCGAATGTGCTTTCTGGTTGTCGAACCAG  <  NC_000913/2553468‑2553182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.