New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 895642 = | 178 (1.180) | 3 (0.020) | 3/508 | NT | 1.7% | coding (652/1134 nt) | potG | putrescine ABC transporter ATPase |
? | NC_000913 | 895887 = | 165 (1.120) | coding (897/1134 nt) | potG | putrescine ABC transporter ATPase | |||||
Rejected: Frequency below/above cutoff threshold. |
GAAGTTACAACCATTGGCGGGCGGCTCTTCGCAAAGCATGATTTTTTCCGGGCGCAGCGCCACATGTACCGGCACGTTATCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/895935‑895642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcccGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGG > NC_000913/895887‑896174 GAAGTTACGACCATTGGCGGCGGGCGCTTCACAAGCCTTGGTGTTTCACGGGCTCAGCGCAACGTGTACCGGCACGTTACCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGAGGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGAT < 2:473095/288‑1 AGTTACAACCATTGGCGGGCGGCTCTTCGCAAAGCATGATTTTTTCCGGGCGCAGCGCCACATGTACCGGCACGTTATCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCG < 1:158472/289‑1 AGTTACAACCATTGGCGGGCGGCTCTTCGCAAAGCATGATTTTTTCCGGGCGCAGCGCCACATGTACCGGCACGTTATCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCG < 1:584700/289‑1 ttcCAACCATGGGCCGGCGGCTCTTCGCAAAGCATTATTTTTGCCTGTGCCAGCGCCACATGTACCGGCCCGTTCTCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCC < 2:1363810/286‑1 TACAACCATTGGCGGGCGGCTCTTCGCAAAGCATGCTTTTTTCCGGGCGCAGCGCCACATGTACCGGCACGTTATCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCC < 1:1313042/288‑1 cgcCTCTTCGCAAGCCAGGATTCTTGCCGGTGGCAGCTCAACATGGAACGGACCGTTATCGCCCACCGAGCAATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGGGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCCCGGAAAAAATCATGCT < 2:558787/285‑1 GCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCtg > 2:1356653/1‑184 GCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGG < 1:1356653/186‑1 TGCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCTCGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGACGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACC > 1:780294/1‑289 GCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACC > 2:979989/1‑288 CGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGGCGAAACCG > 1:1345637/1‑288 CGGAAGAAATCTGGCTTGGCGAAGCGCGTGCAGCCAATGGTGGTAACGTCGCGGTGGGGGAGGTGATACACATAGCCTATCTCGGAGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCTCCGAGCTACAAAACGCCCATCGTCATCGTAACGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGG < 2:1267328/289‑1 CGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGG < 1:802712/289‑1 GAAGTTACAACCATTGGCGGGCGGCTCTTCGCAAAGCATGATTTTTTCCGGGCGCAGCGCCACATGTACCGGCACGTTATCGACCACCGAGGCATCCGCGTCGACTTTCAGTGGATGCACCAGCCCCGGCGAATCAAGCACCAGGCCATCTTCCTGACGCTCTTTGAGTACGCCTTCAAAGACGTTTACCGAGCCAATAAATTCGGCGCTATAGCGGGTAGTCGGATGCTCGTAGATCTCTTCCGGTTCGCCAATCTGGACAAATTTCCCACGATTCATAATGGCGATGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/895935‑895642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcccGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGG > NC_000913/895887‑896174 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |