New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4225888 =	192 (1.270)	3 (0.020)	3/512	NT	1.7%	coding (2061/3684 nt)	metH	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
	?	NC_000913	4227007 =	159 (1.070)					coding (3180/3684 nt)	metH	homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
Rejected: Frequency below/above cutoff threshold.

GCACCATAACGCCGAGATCGACAATTTCGTAGTTGTTACATTGCAGCACCACACCAACGATATTTTTACCGATGTCGTGGACGTCGCCCTTCACGGTGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4226180‑4225888 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGA  >  NC_000913/4227007‑4227294                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCACCATAACGCCGAGATCGACAATTTCGTAGTTGTTACATTGCAGCACCACACCAACGATATTTTTACCGATGTCGTGGACGTCGCCCTTCACGGTGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACCTTCATGCCGTCCATCCACGGGCCTTCAATCACTTCAATCGG                                                                                                                                                                                                                                                                                                      >  1:1284007/1‑289                                       CATTGCAGCACCACACCAACGATATTTTAACCGATGTCGTGGACGTCGCCCTTCACGGTGGCGATCACCATCTTGCCTTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGTCTGGAAGAGGACGCA                                                                                                                                                                                                                                                                <  1:809249/289‑1                                                                                                                                  GCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAAT                                                                                                                                                                                                                    <  1:1058162/242‑1                                                                                                                                  GCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAAT                                                                                                                                                                                                                    >  2:1058162/1‑242                                                                                                                                                                                                                                                                                                   CGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCC                                                                                          >  1:327606/1‑203                                                                                                                                                                                                                                                                                                   CGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCC                                                                                          <  2:327606/203‑1                                                                                                                                                                                                                                                                                                     CATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGCTTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTCTCCGGAGTATCTCCATTACCGTGTGCGTACAGTCTACTGGGGCTATGCGCCGAACGAGCACCTCAACAATGAAGCGCCAATCCGCAAAAACTACCAGGGCATCCGTCCGGCACACGGCTATACGGACTACCCGGAACCTCCGACAACAGCAACCATCCGCGAGTTCCTGGA  >  2:462879/1‑289                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCACCATAACGCCGAGATCGACAATTTCGTAGTTGTTACATTGCAGCACCACACCAACGATATTTTTACCGATGTCGTGGACGTCGCCCTTCACGGTGGCGATCACCATCTTGCCGTTGGTTTTGCCCTGCTCTTTGCTGGCTTCAATAAACGGTTCGAGGTAGGCCACCGCCTGTTTCATGACGCGCGCCGATTTGACCACCTGTGGCAGGAACATTTTCCCTTCGCCAAACAGGTCGCCGACCACATTCATGCCGTCCATCAACGGGCCTTCAATCACTTCAATCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4226180‑4225888 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGA  >  NC_000913/4227007‑4227294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.