| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1127798 | 136 (0.940) | 3 (0.020) | 3/506 | NT | 2.2% | intergenic (+69/‑41) | yceM/murJ | putative oxidoreductase/putative lipid II flippase |
| ? | NC_000913 | = 1127801 | 136 (0.970) | intergenic (+72/‑38) | yceM/murJ | putative oxidoreductase/putative lipid II flippase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGTAACATCTGGCGGTAGCAATTCACCATAATCCAGGTAGACTATTCGCCTCTTTCAGC‑‑‑‑GCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1127733‑1127798‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑‑‑‑gcctgcAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCATA < NC_000913/1127801‑1127516 CTGTAACATCTGGCGGTAGCAATTCACCATAATCCAGGTAGACTATTCGCCTCTTTCAGC‑‑‑‑GCCTGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACAGGGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAAC > 1:417304/1‑269CTGTAACATCTGGCGGTAGCAATTCACCATAATCCAGGTAGACTATTCGCCTCTTTCAGC‑‑‑‑GCCTGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACAGGGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAAC < 2:417304/269‑1 GGCGGTAGCAATTCACCATAATCCAGGTAGACTATTCGCCTCTTTCAGCGCCTGCCTGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAA > 1:714629/1‑288 C‑‑‑‑GCCTGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCCCTCCTCACGCCATTCac > 1:817883/1‑286 C‑‑‑‑GCCTGCAAGGCAGGCGCCGAAAGAGGCGACTAGTCTACCTTGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCTGGCCAGATCTTGTCAACGTTACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTGTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCG < 2:248218/289‑1 cgtCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCGTGATTATGGTGAATTGCTACCGCCATATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCA < 2:145756/285‑1 CTGGAAGGAAGGCGCTGAAAGAGGCGAATAGTCTACCTTGATGATTGTGAATTGCTACCGCAAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTGGGGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGGGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCAT < 2:714629/289‑1 CTGCAAGGCAGGCGCTGAAAGCGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATGGCGCCAGATCTTGTCAACGATAAGTTGCGCCAGCACGGCCTGTTGGCCGGCGGTTTGCGGAACTGTCTGGTTTTGAACACATTCAATGAAGTGCCGCGCACAGCGGACAAACCCTCGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCAT < 2:1032818/289‑1 CTGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCAT < 1:149053/289‑1 TGCAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCCCAAAGCCGACAAACCCCCGTTGCCCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCCCCTCCCGCCATTCCCGCATA > 2:762238/1‑289 CTGTAACATCTGGCGGTAGCAATTCACCATAATCCAGGTAGACTATTCGCCTCTTTCAGC‑‑‑‑GCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1127733‑1127798‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑‑‑‑gcctgcAAGGCAGGCGCTGAAAGAGGCGAATAGTCTACCTGGATTATGGTGAATTGCTACCGCCAGATGTTACA‑GGGTTTATTCACTCATCGCATCGCGCCAGATCTTGTCAACGATACGTTGCGCCAGCACGGCCTGTTCGCCGGCGGTTTGCGGAACTGTCTGGTTTTGCACACATTCAATGAAGTGCCGCGCACAGCCGACAAACCCACGTTGCTCAAGCGTACTCTGCCAACCAGGAATCGGTTTATGCACTACGCCCTGCCCGCGCTCCTCACGCCATTCGCGCATA < NC_000913/1127801‑1127516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |