mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4214796 | 136 (1.130) | 3 (0.030) | 3/498 | NT | 2.1% | coding (517/930 nt) | metA | homoserine O‑transsuccinylase |
| ? | NC_000913 | = 4214987 | 149 (1.300) | coding (708/930 nt) | metA | homoserine O‑transsuccinylase | |||||
| * | ? | NC_000913 | 3989869 = | 114 (0.950) | 4 (0.030) | 3/504 | NT | 3.6% | coding (898/942 nt) | hemC | hydroxymethylbilane synthase |
| ? | NC_000913 | 3989977 = | 102 (0.880) | coding (790/942 nt) | hemC | hydroxymethylbilane synthase | |||||
| * | ? | NC_000913 | = 2713829 | 115 (0.960) | 4 (0.030) | 4/498 | NT | 3.7% | coding (934/1335 nt) | srmB | ATP‑dependent RNA helicase |
| ? | NC_000913 | = 2713908 | 99 (0.860) | coding (1013/1335 nt) | srmB | ATP‑dependent RNA helicase | |||||
| * | ? | NC_000913 | = 1606910 | 92 (0.770) | 3 (0.030) | 3/516 | NT | 3.2% | coding (811/876 nt) | lsrF | putative autoinducer‑2 (AI‑2) aldolase |
| ? | NC_000913 | 1606914 = | 91 (0.760) | coding (815/876 nt) | lsrF | putative autoinducer‑2 (AI‑2) aldolase | |||||
| * | ? | NC_000913 | 852936 = | 139 (1.160) | 4 (0.030) | 3/504 | NT | 2.8% | coding (62/129 nt) | mntS | Mn(2)‑response protein, MntR‑repressed |
| ? | NC_000913 | 854010 = | 139 (1.190) | coding (364/1119 nt) | ybiR | putative transporter | |||||
| * | ? | NC_000913 | = 550165 | 116 (0.970) | 3 (0.030) | 3/512 | NT | 2.2% | coding (539/816 nt) | ylbF | putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein |
| ? | NC_000913 | = 551959 | 147 (1.240) | coding (636/1068 nt) | purK | N5‑carboxyaminoimidazole ribonucleotide synthase | |||||
| * | ? | NC_000913 | 298385 = | 122 (1.020) | 3 (0.030) | 3/510 | NT | 2.2% | coding (342/957 nt) | paoD | moco insertion factor for PaoABC aldehyde oxidoreductase |
| ? | NC_000913 | 298484 = | 148 (1.260) | coding (243/957 nt) | paoD | moco insertion factor for PaoABC aldehyde oxidoreductase | |||||
| * | ? | NC_000913 | 273955 = | NA (NA) | 3 (0.020) | 3/520 | NT | 3.6% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 700631 | 81 (0.670) | coding (964/1221 nt) | nagC | N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor | |||||