New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =13 (0.260)48 (1.050) 36/376 NT 84.2% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 6 (0.130)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTC  >  NC_000913/1209418‑1209831
                                                                                                                                                                                                         |                                                                                                                                                                                                                     
tCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                             >  1:140211/1‑228 (MQ=255)
 atcaccagcattattgaacgatacctgtaatcacactgtattgccatcccccccctaggcggtcgcttttgcggcattccacccccgctgaatgattacagagtgctcaataccaccaatcataaccggtatagctttgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccagCGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                                                                                            <  2:236726‑M2/28‑1 (MQ=255)
               taaacgcaacccggaatacaacggtaattcccgcccccccaggggcagcagcttttgcggcattccacccccactgaatgattactgattgctcaatcccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                              <  1:291063‑M2/42‑1 (MQ=255)
               cccAGCCCCAAATAAACTCACCCCGTAAAGTATGCTATTTATTTGTCGGATAAGCCTTTGCCGGTTCCCGGGATTCTGCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                              <  2:99661/228‑1 (MQ=255)
                  acgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGACGAAATAACAAGCAAATGGCATCATTCctc                                                                                                                                                                           >  1:686081‑M2/184‑227 (MQ=255)
                             aatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                                                                                                <  1:483307‑M2/56‑1 (MQ=255)
                                       tatttcaatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctctcaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATCGCATCATTCATGCTTTTACAAGGGGGATtaaaa                                                                                                                                                      >  2:347582‑M2/163‑227 (MQ=255)
                                        tAAATCAGGCAATTTATTTCATGGATAAGCCTTTGGCAGTTCCGGGTTTTTTTCAGACGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                     <  2:189840/228‑1 (MQ=255)
                                         tttccctcccccccagaggcagatgcttttgcggcattccctcccccatgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                     <  1:92939‑M2/67‑1 (MQ=255)
                                              tacccccccagggggagattcttttgcggcattccaccccctctgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                               <  2:92641‑M2/73‑1 (MQ=255)
                                                ccccctcagaggcagttgcttttgcggcattccccccccactgaatgattactgattgctcaattccacctatcataaccggtatggctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                                                                                                                                             <  1:235189‑M2/75‑1 (MQ=255)
                                                  cccccagaggcagacgcttttgcggcattccacccccactgaatgattactgattgcccaataccaccactcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                           <  1:345022‑M2/77‑1 (MQ=255)
                                                         aggcagatgcttttgcggcattccacccccactgaatgattcctgattgcacaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                                                                                                    <  1:451057‑M2/84‑1 (MQ=255)
                                                            cagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATACCAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                                                                                                 >  1:146631‑M2/142‑228 (MQ=255)
                                                              gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctaccaaaccaaCGTTTATGAAAATGAAGAAATAACACGCACATGGCATCATTCCTGCTTTTCCCTGGGGGATTTACCATGCTAATTGGCAATGTAcgcg                                                                                                                                >  1:99917‑M2/140‑227 (MQ=255)
                                                                        cggcattccaccccctcgtaatgattacgtattgctcaattccaccaatcatagccggtatagctatgaacccggttcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATGTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                     <  2:146631‑M2/99‑1 (MQ=255)
                                                                           cattccccccccattgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                                                                                                  <  1:545734‑M2/102‑1 (MQ=255)
                                                                               ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                                                                                                                                               >  1:11426/1‑163 (MQ=255)
                                                                                tCCGGGTATTCCTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                              <  2:11426/163‑1 (MQ=255)
                                                                                caccccccatgaatgattactgattgctcaattccaccaatcataaccggtatagctatgaaaccggtgcgtccgaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                                                                                             <  1:332538‑M2/107‑1 (MQ=255)
                                                                                cacccacactgaattattactgattgcacaataccacaaatcataaccggtatagcgattaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAATGACCAGaa                                                                                                             <  1:690404‑M2/107‑1 (MQ=255)
                                                                                  cccccacggaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                           <  1:377320‑M2/109‑1 (MQ=255)
                                                                                  cagccacggaatgattactgattgctcaataccaccaatcataaccggtatagcgatgaaaccggtgcatcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                           <  1:327803‑M2/109‑1 (MQ=255)
                                                                                                 tgcgtcttgctcaataccaccaagcataagcggtattgctatgaaaccggtacgtcctaattgagccgtttctgcattgagttttgctcattctcccaaaccaaCGTTTATGAAAATGAAGAAATGACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGTATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                            <  1:66493‑M2/124‑1 (MQ=255)
                                                                                                 tacttattgctaaataccaccaatcataaccggtattgctatgaaaccggtgcgtcctaatgtagccgttgcggcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                            <  1:608168‑M2/124‑1 (MQ=255)
                                                                                                 tactgatggcacaagaccaccaataaaaaccggtatagctatgaaaccggtgcgtcctaaagtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                            <  1:264658‑M2/124‑1 (MQ=255)
                                                                                                  gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                            <  2:140211/227‑1 (MQ=255)
                                                                                                     gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATg                                                                                         >  1:477356‑M2/101‑227 (MQ=255)
                                                                                                     gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgc                                                                                        >  2:409351‑M2/101‑228 (MQ=255)
                                                                                                            caataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc                                                                                 <  1:137540‑M2/135‑1 (MQ=255)
                                                                                                                          ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                               <  1:676440‑M2/73‑1 (MQ=255)
                                                                                                                          ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAAATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTTTGCAGGATGCGa                                                                   >  1:539463‑M2/80‑228 (MQ=255)
                                                                                                                                  tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccagCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTAATTGGCTATGTACGCGTATCAACAAATGGCCAGAACACAGATCTAAAACTTAATGCGCTGAACTTAGCAGACAGCGAGCCGAatt                                                           >  2:297631‑M2/72‑228 (MQ=255)
                                                                                                                                         atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGAATTTTGAAg                                                     >  1:286397‑M2/65‑227 (MQ=255)
                                                                                                                                          tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                                                                                                                                               >  1:197452‑M2/64‑104 (MQ=255)
                                                                                                                                          tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGa                                                                                   >  2:478205‑M2/64‑196 (MQ=255)
                                                                                                                                           gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                              <  2:197452‑M2/42‑1 (MQ=255)
                                                                                                                                           gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                  <  1:478205‑M2/134‑1 (MQ=255)
                                                                                                                                            aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGAAGGATGCGa                                                                   >  2:353390‑M2/62‑210 (MQ=255)
                                                                                                                                            aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGCCCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGCCaa                                                 >  1:403346‑M2/62‑228 (MQ=255)
                                                                                                                                             aaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAg                                                                  <  1:353390‑M2/150‑1 (MQ=255)
                                                                                                                                                 ggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTCCAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                      >  1:91713‑M2/57‑218 (MQ=255)
                                                                                                                                                  gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAg                                                     <  2:91713‑M2/163‑1 (MQ=255)
                                                                                                                                                                 gcctgtgattcattgagttttgctcctgctcccaaaccaaCGTTTAGGAAAATGAAGAAATAACAAGCAAATGGCATCAATCCTGCTTTTACCAGGGCGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGAGTTTTGACGACAAGATAAGCGGCACAAAGTCCGa                           <  2:477356‑M2/188‑1 (MQ=255)
                                                                                                                                                                 gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAACTGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGAACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGACCTGTGCAGGATCCGAGCGGATTTTTGAAGACAAACTAAGCGGCACAAATTcc                             >  1:206682‑M2/41‑226 (MQ=255)
                                                                                                                                                                 gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACCCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGACCTGATTTTTGAAAAAAAGAAAAacggcaaaaaaaccta                           >  2:281081‑M2/41‑222 (MQ=255)
                                                                                                                                                                 gcccttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGa                           <  1:347582‑M2/188‑1 (MQ=255)
                                                                                                                                                                  ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGCTTTTTGAAGACAAGATAAGCGgcacaaatccc                             >  1:672328‑M2/40‑221 (MQ=255)
                                                                                                                                                                      tgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                      >  1:58101‑M2/36‑197 (MQ=255)
                                                                                                                                                                       gctggattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAg                                                     <  2:58101‑M2/163‑1 (MQ=255)
                                                                                                                                                                            attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACCGATCTACAACATAATGCGCTGCACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAAGCGACCAAAGTCGACAAGGccgggga                >  2:370142‑M2/30‑226 (MQ=255)
                                                                                                                                                                             ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGcac                                    >  2:664449‑M2/29‑207 (MQ=255)
                                                                                                                                                                              tgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGcaca                                   <  1:664449‑M2/180‑1 (MQ=255)
                                                                                                                                                                               gagttttgctccttctccaaaaccaaACTTTATGAAAATGAAGAAATAACAAGAAACTGGCATCATTCCTGCTTTTACCAGGTGGATTTAACAGGCTGATTGGCTATGTACGCGTATCCACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGATCTGTGCAGGATGCGAGCTGATTTTTGAAGCCAAGATAAGCGGCACACAGTCCGAAAGGCCGGGACTGa             <  2:613923‑M2/202‑1 (MQ=255)
                                                                                                                                                                                    ttgccccttttccccacccatCTTTTATGAAAATGGATAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGGCCAGGACACAAATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGGGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGaaaaaa        <  2:686081‑M2/207‑1 (MQ=255)
                                                                                                                                                                                         ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATTGCATCTTTCCTGCTTTTACCAGGGGGATTTAACATGCGTATTGGCTATGTACGCGTAACAACAAATGACCAGAACACAGATCTTCAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt   <  2:99917‑M2/212‑1 (MQ=255)
                                                                                                                                                                                          cttttcccaaaccacCATTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGTGGAGTTAACATGCTTAGTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGGAATGCGCTGAACTGTGCGGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTc  <  2:649865‑M2/213‑1 (MQ=255)
                                                                                                                                                                                                         cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGcaca                                   <  1:322760/180‑1 (MQ=255)
                                                                                                                                                                                                         |                                                                                                                                                                                                                     
TCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTC  >  NC_000913/1209418‑1209831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.