New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780512 (0.240)49 (1.080) 41/376 NT 85.2% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 6 (0.130)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

CATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209379‑1209829
                                                                                                                                                                                                                               |                                                                                                                                                                                                                                   
cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCTGAGAGGCTCAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAAcctt                                                                                                                                                                                                                                 <  1:148378‑M2/228‑5 (MQ=255)
     cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTTGCCGAAGGGCTGAAGGCCACGGAACCGGGACCCCCACAGGTACTGCATAGccttctccc                                                                                                                                                                                                                            <  1:699323‑M2/228‑10 (MQ=255)
        tGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTCTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGCCGGAGTGGCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGAAGAGccttctcccaaa                                                                                                                                                                                                                         <  2:82479‑M2/228‑13 (MQ=255)
          aaTACTAAAAATAGACCGCCCTGGAAAAAACCCCCGCCCGTCTTCCCAGCCCCAAATAAACTCACCACGTAAATCAGGCAATTTATTTGGCGGATAAGCCTTTGCCAGGTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacc                                                                                                                                                                                                                       >  2:43735‑M2/1‑214 (MQ=255)
           aTACTTAAAATAGAGCGACCTGTATCAGTCCCCCGCCCGTCATCCCAGCCACGAACAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                                                                                                                                                      >  1:105729‑M2/1‑213 (MQ=255)
                 aaaaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttt                                                                                                                                                                                                                <  1:445399‑M2/228‑22 (MQ=255)
                       gagCGACCTGTATCAATCCCCCGCCCTTTATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACTCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  1:476203‑M2/1‑201 (MQ=255)
                       gagCGACCTGTACCAAACCCCCTCACTTTATCCCAGCCACGAATAAACCCACCACGGAAATCAGGCAATTTATTTGTCGGATAAGCATTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  2:572553‑M2/1‑201 (MQ=255)
                        agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCACTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAGAGCAGAGcgttcccccaaaccaagggtttagagag                                                                                                                                                                                                         <  1:559897‑M2/228‑29 (MQ=255)
                         gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAACCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGTAGTGGCGAAAGGCCACGGAACCGGGACACCAACAGGCAATGCAGAGccttctccccaaccaaggatttgcaagac                                                                                                                                                                                                        <  2:553075‑M2/228‑30 (MQ=255)
                            aCCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                     >  1:69624‑M2/1‑196 (MQ=255)
                             ccTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCCATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGACACGGGACCCCAACAGGTAATGCAGGGccttctccccaaccaaggttttcgggagccggt                                                                                                                                                                                                    <  2:486660‑M2/228‑34 (MQ=255)
                             ccTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCGGCCTGTTGGCGGCTGGGCTGAAGGCCACTGAACCGGGACCCCAACAGGTAATGCGGGGccttctccccacccaagggtttcgaaaaccatg                                                                                                                                                                                                    <  2:260969‑M2/228‑34 (MQ=255)
                                 tATCCATCCCCCGGCCTTCAACCCCGCCACGAATAATCTTCCCACGTAAATCAGGCAATTTAATTGTCGGCTAAGCCTTTGCCATTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:414545‑M2/1‑191 (MQ=255)
                                 tATCAATCCCCGCGCCGTCATCCCATCCACGAATAAACTCACCGCGGAAATCAGGCAATTTATTTGGCGGATAAGCCGTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTCCAGCCATCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:38289‑M2/1‑191 (MQ=255)
                                 tATCAACCCCCCCCCCGTCACCCCAGGCCCGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:699323‑M2/1‑191 (MQ=255)
                                       tCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                          >  1:140211/1‑228 (MQ=255)
                                           ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGCTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCAAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacaaaggttttcgagggccgtttgcacagtgccat                                                                                                                                                                                       <  1:401148‑M2/227‑47 (MQ=255)
                                                      cccAGCCCCAAATAAACTCACCCCGTAAAGTATGCTATTTATTTGTCGGATAAGCCTTTGCCGGTTCCCGGGATTCTGCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                           <  2:99661/228‑1 (MQ=255)
                                                                        ccccccgtAAATCAGGCAAATTATTTTGCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                         >  1:639996‑M2/3‑152 (MQ=255)
                                                                          ccacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggctttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcg                                                                                                                                                        <  1:185145‑M2/227‑78 (MQ=255)
                                                                             cGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGCAGAGccttctccccaaccaaggttttcgagagccgtttgcacagtgccatccgatttgaacacgccaaacggattcttggggctt                                                                                                                                                    <  2:526825‑M2/228‑82 (MQ=255)
                                                                               tAAATCAGGCAATTTATTTCATGGATAAGCCTTTGGCAGTTCCGGGTTTTTTTCAGACGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                  <  2:189840/228‑1 (MQ=255)
                                                                                    cAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGGTCCGGGTATTCTTCAGCATAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:470684‑M2/1‑140 (MQ=255)
                                                                                       gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagtgccatccgctttgaaatggccaaacggattcttcgggcttaaagacaccc                                                                                                                                          <  2:237347‑M2/228‑92 (MQ=255)
                                                                                       gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaaagccgtttgcacatggccatccgatttgatatcgccaaccggagtcttggggcttaacaacaacg                                                                                                                                          <  2:392649‑M2/228‑92 (MQ=255)
                                                                                        cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggatttcgagagccgtttgcccagagccttccgatttgatatcgccaaacggattcttgcggcttacaagcagcgc                                                                                                                                         <  2:97823‑M2/228‑93 (MQ=255)
                                                                                            ttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcga                                                                                                                                     >  1:260969‑M2/1‑132 (MQ=255)
                                                                                                 tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgctttgatatcgccaaacggatacttgcggcttaacagaagcgcgcaaagtgc                                                                                                                                <  1:146740‑M2/228‑102 (MQ=255)
                                                                                                   tCGGATAAGCCTTTGCCAGTTCCGGGTTTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                                                                                                                 >  1:526825‑M2/1‑125 (MQ=255)
                                                                                                   tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcg                                                                                                                               >  1:97823‑M2/1‑125 (MQ=255)
                                                                                                   tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagtgccatccgatttgttatcgccaaacgggtgcttgcggcttaccacacgcgcgcgacgtgcgg                                                                                                                              <  1:189781‑M2/228‑104 (MQ=255)
                                                                                                   gcgGATAAGCTTTTGCCAGGTCCGGGGATTCTGCAGCATAAAAAGCGGCACCATTGCCGTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGTTAATGCAGAGccttcggccaaaccaaggttttcgagagccgtgtgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                                                                                                                 >  2:16986‑M2/2‑125 (MQ=255)
                                                                                                     ggATAAGCCTTTGCTAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagaagcgcgcgaggtgcggaa                                                                                                                            <  1:455518‑M2/228‑106 (MQ=255)
                                                                                                              tttGCCGGTTCCGGTTATTCTGCAGCGGAAAAAGCTGCCCCATTCCACTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACGCCAACAGGTAATGCAGAGccttctcccaaaccaaggtttgctagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactgg                                                                                                                   >  2:35268‑M2/1‑114 (MQ=255)
                                                                                                                tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacccaggttttcgagagccgtttgcacagtgccatacgagttgatatcgccaaacggattcttccggcttaacagcagagcccgaagtgcggtaagtaactg                                                                                                                    <  1:35268‑M2/225‑114 (MQ=255)
                                                                                                                 gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaaagcagcgcgcgaagtgcggtaagtaaatggtc                                                                                                                 <  1:22432‑M2/227‑117 (MQ=255)
                                                                                                                      ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgacgagcggtaagtaattggtctggccg                                                                                                           <  1:23163‑M2/228‑123 (MQ=255)
                                                                                                                      ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                                                                                                                                            >  1:11426/1‑163 (MQ=255)
                                                                                                                       tCCGGGTATTCCTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                           <  2:11426/163‑1 (MQ=255)
                                                                                                                               ttcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgcgagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttccggcttaacagaaacgcgcgacgttctgtaagtaactggtcgtgccgccccttct                                                                                                   <  1:593980‑M2/227‑131 (MQ=255)
                                                                                                                               ttcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttct                                                                                                                                                                                                                               <  1:155063‑M2/103‑7 (MQ=255)
                                                                                                                                tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                                                                                                              >  2:155063‑M2/1‑96 (MQ=255)
                                                                                                                                   tcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccagg                                                                                              >  1:545026‑M2/1‑93 (MQ=255)
                                                                                                                                      gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGctttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaccgcagcgaccggagtgggggaagtaacgggtcgtgccgccccctcccacggct                                                                                            <  2:63861‑M2/227‑138 (MQ=255)
                                                                                                                                         gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                         <  2:140211/227‑1 (MQ=255)
                                                                                                                                                 ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagccctcgaaatgcggtaagtaactggtcgggccgccccttctccacgctggcaccggatg                                                                                 <  1:609077‑M2/227‑149 (MQ=255)
                                                                                                                                                   cACCATTGCATTTCAGCCATACTGGTGGCCGGGTGGCTGAAGGCCACGGAACCGGGACACCAACGGTGTAGGCAGAGcctttacccaaaccaaggtcttcgagagccggttgcacagggccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcggagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgc                                                                                >  2:185145‑M2/1‑77 (MQ=255)
                                                                                                                                                        ttgcctttacaccagcctgttggcggagTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagggccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacc                                                                         >  1:249863‑M2/12‑72 (MQ=255)
                                                                                                                                                         tGCATTCCAGCCAGCCGGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                        >  1:237347‑M2/1‑71 (MQ=255)
                                                                                                                                                                cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                                                                                                                                                                           <  2:296643‑M2/90‑27 (MQ=255)
                                                                                                                                                                 agccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  1:296643‑M2/1‑63 (MQ=255)
                                                                                                                                                                    cagccTGTTGGCGGACTGGCTAAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagt                                                             >  1:392649‑M2/1‑60 (MQ=255)
                                                                                                                                                                      gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtcaataactggccgtgccgccccttctccaggcgggcaccggaaggccacacccagctgcaaagatc                                                           <  2:416707‑M2/228‑171 (MQ=255)
                                                                                                                                                                                                    aaCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaattgcggtaagtaactggtcgtgccgccccttccccagcctggccccggatgcctcccccccgcggcaaagctcctcctggaccatgccaaacgagtcctcaac                             <  2:506927‑M2/228‑201 (MQ=255)
                                                                                                                                                                                                         ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccac                                                                       <  1:585266‑M2/181‑159 (MQ=255)
                                                                                                                                                                                                          gACACCAACAGGTAACGCAGACgcttctcccaaaccaaggtttgcgatcgccgtttgcccagtgccagccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtccggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacg                                                                      >  2:585266‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                            cacCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaaattcctcctgcaccatgtcaaagtagtcatcatccagatcg                      <  1:415125‑M2/227‑208 (MQ=255)
                                                                                                                                                                                                              ccAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcgtccagctcgttg                   <  1:609547‑M2/228‑211 (MQ=255)
                                                                                                                                                                                                                  cATGTAATGCAGAGccttcccccaaaccaaggtttgcgagagccgtttgcacagtgccatccgatgtgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcag               >  1:377436‑M2/1‑14 (MQ=255)
                                                                                                                                                                                                                      tAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga                                                                                   >  1:363426‑M2/1‑10 (MQ=255)
                                                                                                                                                                                                                        aTGCAGAGccttcccccaaaccaaggttttcgatagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgc         >  1:486660‑M2/1‑8 (MQ=255)
                                                                                                                                                                                                                         tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagatcctcctgcaacatgtcaaagtagccatcatcccgatcggtggcaggcgggcc        <  1:301046‑M2/228‑222 (MQ=255)
                                                                                                                                                                                                                             gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggccccggaggcctccaccacgctgcaaagttcctcctgcaacatgtcaaataaggcatcatccaaatcgggggcaggcgtgccggg     <  2:28197‑M2/227‑225 (MQ=255)
                                                                                                                                                                                                                               gccttcccccacaccaatgtttacggaggccttttgccctgtgccagccgagtggatttcgccaaacggattcctgccgcttaacagcaacgcgcgaagtgcggtaagtaactggtcgtgccgcccctcctccaggctggccccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctg  >  2:244092‑M2/1‑1 (MQ=255)
                                                                                                                                                                                                                               |                                                                                                                                                                                                                                   
CATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209379‑1209829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.