| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | 100% | [crl] | [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908–258674 | 258683 | 10–776 | 71 [0] | [0] 70 | [crl] | [crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 63 (1.330) | 53/392 | NT | 100% | intergenic (+8/‑769) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers | |||||
GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGACTGGAGCACACCCTGCGT > NC_000913/258462‑258907 | taggaatcccatttaccgccgtgtatcggaattttgacaaaggtctttaggaaataaccgactagatcgaaaaacgcttgtggtaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAgtgga < 2:443356‑M2/6‑3 (MQ=255) gttcccatttaacccggtttttcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa < 2:325951‑M2/10‑1 (MQ=255) cccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagaagattgatcaaaaaatttaccgaactaggcccgtatattcgggaaggaaagtgcaaaaaaaa > 2:569052‑M2/216‑223 (MQ=255) gtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggaaacccgaagagcagattgatcaaaaaatttaccgcactaggcccgaagattcgtgaaggaaAGAGCAAAATTAAACGATTctttttg > 2:677707‑M2/203‑227 (MQ=255) tgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagccgattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggaaAGTGCAAAGATAATCGATTCtttt > 1:451953‑M2/202‑225 (MQ=255) tgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtggtaaaaatttgctaaattgtgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa < 1:268707‑M2/6‑1 (MQ=255) gtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa < 1:569052‑M2/28‑1 (MQ=255) tcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgaatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcggattgatcaaaaaatttaacgccctaggcccgtatattcgtgaaggaaAGTGCAAAGAGAATCGATTCTTTTTCGAtt > 1:532016‑M2/198‑227 (MQ=255) cggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt > 1:454422‑M2/197‑228 (MQ=255) cggaattttgaaaaagggtttcaggaaattaccgactggatcgaaaaacggttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGt < 2:598448‑M2/32‑1 (MQ=255) ttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacatgagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgccctaggcccgcaaattcgtgaaggtaAGTGCAAAGAAAATCGATTATTTTTCGATGGTTTGGCTg > 2:427124‑M2/190‑228 (MQ=255) ttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaactttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtattttcgtgaaggacAGTGCAAAGATAATCGATTCTTTTTCGCTTGTCTGGCTg > 1:18608‑M2/190‑228 (MQ=255) ttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcatattcttgaaggtaAGTGGAAAGATAATCGATTCTTTTTCGATTttctggctgtagacgtaaaag > 2:630063‑M2/178‑218 (MQ=255) agaaatccccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGaa < 1:162398‑M2/55‑1 (MQ=255) aatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAAcc > 1:86297‑M2/171‑228 (MQ=255) tccccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAAcc < 1:335448‑M2/58‑1 (MQ=255) actggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagcttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGAGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACAGTGACCgg > 1:702889‑M2/163‑228 (MQ=255) actggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgggaaggtaAGTGCAAAGATAATCGATTTTTTTTTGGTTTTCTGGCTGTATGCGTCA‑ACGTGAAACCCGCCCCgg > 2:416244‑M2/163‑228 (MQ=255) tggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGGTTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGa < 1:416244‑M2/67‑1 (MQ=255) gatttaaaaaacgcttttgttaaaaatttgttaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaattacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAg < 2:629833‑M2/69‑1 (MQ=255) gatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaaccggagatagcaatgacgttaccgagtggacacccgacgagaagattgatcaaaacatttaccgccatcggcccgtatattcgtgaaggtaCGTCCAAAGATACTCGTTTCTTTTTCGGTTGCCTGGCTGTATGCGTCACACG‑AAAACAGGCACCGGa > 1:404389‑M2/159‑225 (MQ=255) atcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTg > 1:599837‑M2/158‑228 (MQ=255) aaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGGGAAACCGGAACCGGAAGTgcggg > 1:566548‑M2/154‑226 (MQ=255) gtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg > 1:379165‑M2/144‑228 (MQ=255) atttgttaaattttgccaatttggtaaaacagtggcatcgaaacaggagatagaaatgccgttacgaggtggacaccggaagagcagattgaacaaaaaatttaccgcactaggctcgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTGTGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat < 2:333147‑M2/94‑1 (MQ=255) tttgctaaattttgccaatttggaaaaacagtttgatcacaacaggagatagcaatgatgttgccgagtggacacccgaagaacagattgatctaaaaatttaccgcactaggcccgtttattcgtgaaggtaATTGCAAAGCTAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGACA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat < 1:435940‑M2/94‑1 (MQ=255) tgctaaattttgccaatttggtaaaacagttgcatcacaacaggagataggaatgacgttaccgagtggacacacgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAA‑ACGTGAAACCGGCACCGGCAGTGCGTGAATTCTGGGGCTGGgggctgga > 1:632954‑M2/132‑228 (MQ=255) tttgccaatttgggaaaacagttccaacacaacaggagatagcaagcgcgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgtactaggcccgtttattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTGTCGATTGTCTGGCTGTATGCGGCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAg < 2:306980‑M2/105‑1 (MQ=255) tgccaatttggtaaaacagttgcatcacaacaggagatagcaattacgttaccgagtggacacccgaagagtagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcg < 1:111702‑M2/107‑1 (MQ=255) aagttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagttgacccccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAg < 1:419819‑M2/110‑1 (MQ=255) tttggtaaaacagttgcatcacaacaggatatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGaa < 1:165018‑M2/113‑1 (MQ=255) tggtaaaaaagtggcatcaaaacaggaaatagcaatgtcgttaccgagtggacatccgaagagcagagtgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTTGTGGATGGAGCTGGAAGCGCAGGAATc < 2:532016‑M2/115‑1 (MQ=255) aaaacagttgcatcaaaaagagagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGGCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGt < 2:97001‑M2/119‑1 (MQ=255) acaacggagaatagcaaagcggttaccgagtggcaacaaggagagcacagtgatcaaaaaatgtaccgcactaggctcgtatagtcgggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAGTGTCTGGCTGGATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGGGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa < 2:566548‑M2/133‑1 (MQ=255) gagacagaaatagaaatgacgttcccgatgggacacacgaagagcagattgatcaaaaaatttaccgccataggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTa < 1:701942‑M2/133‑1 (MQ=255) caacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTc > 1:184243‑M2/95‑174 (MQ=255) aacaggagatagaaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcattaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCt < 2:184243‑M2/81‑1 (MQ=255) atagaattgctgttcccgtgtggaaacccgaagagcagattgatcaaaaaatttaccggtctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGTTTGTCTGGCTGTATGCGTCA‑ACGTGAAGCCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt < 2:43806‑M2/143‑1 (MQ=255) agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTCCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAg > 1:404535‑M2/84‑188 (MQ=255) agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTCCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAg < 2:404535‑M2/105‑1 (MQ=255) gatatgtcgttccggagtggacacccgaaagggagattgaacaaaaaatttaccgcactaggcccggatagtcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTg < 2:275461‑M2/146‑1 (MQ=255) acaatggcgttcccagggggacacccgaataggagaatgaacaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTg < 2:379165‑M2/146‑1 (MQ=255) caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGTGGCTGGTGGATGGAGCTGGAAGGGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTgg > 1:43806‑M2/82‑223 (MQ=255) tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtagattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGAATGCGTCA‑ACGTGAAACCGGCACCGGACTATCGTGAATTCTGGGGCTGTCGGTTGTAGCTGGAAGCGCAGGAATCCCGGTTTTCCTACAGTTACCACTTTGGTCtgttgg > 2:460959‑M2/79‑226 (MQ=255) acgttaccgagtggacacccgaagagcagattgataacaaaatttaccgcactaggcccgtatattcgtgaagggaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGGGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAGTTCTTGGGCTGGTGGATGGAGCTGGAAGCGGAGGAATCCCGTTTTTGCTGCAGTTACCAggttggtgttgtc > 2:701942‑M2/77‑219 (MQ=255) taccgagttgacacccgaatagcagtttgaacaaaaaatttaccgcttgaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTGTCGATGGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAg < 1:334129‑M2/156‑1 (MQ=255) agtggacacccgaagagcagattgatcaaaaaatttaccgctctaggcccgtatatgcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGc < 1:427124‑M2/161‑1 (MQ=255) gagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAACCGCAGGAATCCCGTTTTACCTACCGTTACCAGTTTGGTCTGGTCGATAAAGCAGGCGACTGAAAGAgtgt > 2:404716‑M2/54‑228 (MQ=255) gcaaattttccaaaaaatttaccgcactaggcccgtatattcgttaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTc < 1:316842‑M2/177‑1 (MQ=255) cagatttattaaaatatttacctcattaggcccgtatattcgggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAGGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTc < 2:207765‑M2/177‑1 (MQ=255) cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGGGTTc > 1:572825‑M2/51‑227 (MQ=255) acgattgatcaaaaaatttcccgctctgtgcccgtatatgcgtgaaggtaAGTGCAAAGATAATCGATTCGTTGTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTc < 1:677707‑M2/177‑1 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGActggaagaggtttc > 1:460689‑M2/49‑220 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGGGCAAAGATAATCGCTTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTTTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTCACAGTTTGGGCTGTTCGATAAACGAGGgtcctggaagaggttaccgg > 2:290370‑M2/49‑220 (MQ=255) gttgataaaaaaatgtaccgcactaggcccgtatattctggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAaga < 1:290370‑M2/171‑1 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATc < 1:282131‑M2/115‑1 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTCCAGTTACCAGTTTGGTCTGTTCGTTAAAGCAGGGGACTGGAAGAGGGTTCCGGTAAAAGac > 1:516685‑M2/41‑228 (MQ=255) ttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGCTGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTCCCAGTTGGGTCTGTTCGATAAAGCAGGCGGCGGGCAGAGGGTCCCGGAAAAAGAAAC‑TGAAg > 2:603046‑M2/34‑228 (MQ=255) gtccgccctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGaa < 1:603046‑M2/194‑1 (MQ=255) ggcccggatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGa < 1:630063‑M2/206‑1 (MQ=255) cccttattttcgtgaaggtaAGTGCAAAGATAATCGGTTCTTTTTCGAGTGTGTGGGTGTATGCGGCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGACt < 2:572825‑M2/208‑1 (MQ=255) gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGGTAAAGCAGGCGACTGGCAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGTACGACTGGa > 1:233253‑M2/18‑228 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGAACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGATTGGTCTGTTCGATAAAGCAGGCAACTGGAAGAGTGTTCCGGTAAAAGCAAC‑TGAAGTGGTGGAAGGACGGGAg > 2:582192‑M2/17‑228 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGACTGGAGca > 1:177250‑M2/15‑228 (MQ=255) tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGTTGGAGCTGGAATCGCAGGCATGCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGG‑GAAAGGCACTTGACGTGGTTTAACAACGggtgccaac > 1:192182‑M2/12‑224 (MQ=255) cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGCCTGTTCGCTCAAGCAGGCGACTGGAAGAGTGTTACGGGAAACGCACC‑TGAAATGGTTGAACGACTGGAGCACAcc > 1:331607‑M2/11‑228 (MQ=255) cgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGGGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGCCTGGGCCACAcc > 1:498317‑M2/11‑228 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGa > 2:546393‑M2/7‑212 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGa < 1:546393‑M2/206‑1 (MQ=255) ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGCCTGGAGCACACCCGGCGt > 1:490839‑M2/5‑228 (MQ=255) | GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA‑ACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACAC‑TGAAGTGGTTGAACGACTGGAGCACACCCTGCGT > NC_000913/258462‑258907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |