| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 149,436 | A→G | 7.0% | S56P (TCC→CCC) | panB ← | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 149,436 | 0 | A | G | 7.0% | 200.6 / 2.1 | 75 | S56P (TCC→CCC) | panB | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (24/42); new base G (4/3); total (30/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCACGTTCGGTCAGCATTTGTACGGTTTCTACCAGCCACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGG > NC_000913/149212‑149661 | ggCACGTTCGGTCAGCATTTGTACGGTTTCTACCAGCCACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCCGGCGGTTTGGTGCGCCGCCACGTACGGCGGCAGGCTGGGAGGCGGAATCGGCAACGGTGACTGGGAGGGGGGGGt > 2:185074/1‑227 (MQ=255)ggCACGTTCGGTCAGCATTTGTACGGTTTCTACCAGCCACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCCGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGGAGGCGATAGCGGCAACGGGAACGTGCAGGGGGGAGt > 1:612564/1‑227 (MQ=255) gCACGTTCGGTCAGCATTTGTACGGCTTCTACCAGCCACTCACCGCCTTCCATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCGGTTTGGTGCGCCGCGACGAACGGCGGCCGCTGGGTACGCGCTACCTGCAACGGCGACCGGCCGGGCGGGGTCg > 2:201679/1‑228 (MQ=255) gCACGTTCGGTAAGCATTTGTACGGTTTCTCCCAGCCACTCACCGCCTTCAATTTTGCCCATGTTAGCACCGGCACGCATAACCGTGGCGGCGTTTTCGAAGGCTTGGTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCg < 1:558221/228‑1 (MQ=255) tcacaaTTTGTACGTGTTCTACCGGCCACCCACCTCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCTTTGCGGCGTTTTCGAAGGCTTGGTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGaa < 1:405064/223‑1 (MQ=255) tCAGCTTTTTTCCGGTTTCGCCCCGCCACTCTCCGCCTTCAATTTTGACCCTGTTAGCCCCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGaa < 2:177705/228‑1 (MQ=255) ttCTACCAGCCACTCACCGCCTTCAATTGTGACCAGGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCg < 1:66168/227‑1 (MQ=255) tCTACCAGCCACTCACCGCCTTCAATTTTAACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCACCGGTAACGGGCAGGGTGGAGTGGTGCCCCGGAACCGTCATGCCCAGCGa > 1:684843/1‑227 (MQ=255) cAGCCACTCCCCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGcc < 1:43703/228‑1 (MQ=255) ccACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCCGCCGCAGGCAGTTTGGTGCGCCGCGACGTCCGGCGGCAGGGTGGTAGGCGAAATCGGCAACGGCAACTGGCAGGGCGGAGTCGTGCCCCTGAACCGCCCGGCCCAGCGAATCGccccc > 2:506397/1‑226 (MQ=255) ccACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGGTTGGTGCGCCGCGACGTACGGCGGCAGTGGGGTAGGCGATGTTGGCGACGGGAACTGGCGGGGGGGGAGCGGGCCCCTGAACCCTCAGGCCCCGCAAAACccccca > 2:597036/1‑226 (MQ=255) ccccGGCTTTAATTTTGACCCTGTTTGCCCCGTGACGCATACCCGTGGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATGCGCCATAAACGGCAGGGCAGCCAGCAGCAGGAAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCa < 2:140987/226‑1 (MQ=255) cACCGCCTTCAATTTTGGCCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTGTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCa < 1:113801/228‑1 (MQ=255) ccGCCTTCAATTTTGACCATGTTTGCCCCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGGTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATg < 1:597036/228‑1 (MQ=255) ccGCCTTCAATGTTGACCATGTTGGCACCGGCACGCATAACCGTTGCGGCCTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCGTAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATg < 1:289445/228‑1 (MQ=255) ccTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCCGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGGACCTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGTCCAGCGAACCGCCCACCAGCATGACg > 1:641715/1‑228 (MQ=255) tCAATTTTGACCATGTTAGCCCCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGGTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTa < 1:54154/228‑1 (MQ=255) ttAGCCCCGGCTCGCATAACCGGTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCa < 1:229456/228‑1 (MQ=255) gCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGGGGAGGCGTGCCCCTGGAACGTCCTGCCCCGGCAATCGCCCACCAGCATGGCGTTAAGCCCCTCCTCAACAAAAAGGTTg > 2:482885/1‑228 (MQ=255) gCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGCGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAAAGCTTg > 1:278855/1‑228 (MQ=255) gCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGAACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGGGGAGTCGTGCCCCTGAACCGCCATGCCCAGCGAATCGCCCACCAGCATGACGGTAAGCCCTTCATCAGCAAAACGTTTg > 1:595109/1‑228 (MQ=255) gCACGCATAACCGCTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGCGGTAGGCGATATCGGCAACGGAAACTGGCAGGGTGGAGTCGGGCCCCGGAACCGGCATGCCCCGGGGAACGCACCCCAGCAGGCCGTTAAGCCCTCTATAAGCCAAGAGTTTg > 2:105364/1‑228 (MQ=255) cACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTgg < 1:651875/228‑1 (MQ=255) cACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGGAGGCGATATCGGCAACGGTAACTGGCAGGGGGGCGTCGTGCCCCTGAACCGTCATGCCCCGCGAATCGGCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTg > 1:238707/1‑227 (MQ=255) ccGCATAACCGTTGGGGCGTTTTCCGAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGTAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGc < 1:185074/227‑1 (MQ=255) gCATAACCGTTGCGGCGTGTGCGAGGGCTTGGTCCGGCGTG‑GCAGACGCCATAAGCGGGAGGTCAGCCAGAAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGa < 1:329267/228‑1 (MQ=255) gacccccGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGGG‑GCATACGCCAGAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGa < 1:1712/222‑1 (MQ=255) cttggcggggTTTTCGAAGGGTTGTTCCGGGGTG‑GCATACGGCCTAAGCGGCAGGTCAGCCGGCAGCAGGAAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCAAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCtata < 2:581014/224‑1 (MQ=255) gTTGCCGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCCTGCGCCATAAACGGCAGGTCAGGCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCtata < 1:589278/227‑1 (MQ=255) cggcgTTTTAGAAGTGTAGTTGCGG‑GTGTGGATCCCCCAGAAACGGCAGGTCAGCCGGCAGCCGGCAGTTGGGGTCGCCGCGACGTACGGGGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCTCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCAt < 2:165121/228‑1 (MQ=255) gcgTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACAAGCATGACGGTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCCATAGTCAGaa > 1:77611/1‑228 (MQ=255) ttCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGGGGGGTAGGCGATATCGGCAACGGAAACTGGCCGGGCGGCGGCGTGCCCCTGAACCTTCATGCCCAGCGCAACGCCCACCAGCCTGACGTTAAGCCCTTCATCCGCAAACAGATTTGCGCAGCTATCGTCATAAACggg > 2:506665/1‑227 (MQ=255) cGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGa < 1:542885/228‑1 (MQ=255) gTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGTGGAAGCTATAGTCATAACCGGGGATGGTcccgt > 1:671688/1‑227 (MQ=255) gTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATCGTCATAAGCGGGGATGGTCCCGa > 1:376127/1‑228 (MQ=255) gCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGtt > 1:448172/1‑228 (MQ=255) aaaCGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGGGGAGTCGGGCCCCTGAACCGCCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCCTACGCAAAGAGTTGGGCGAAGCTATAGTCATAAGGGGTGATGGGCGCGAAACGGTTTTTTTCCTGGTTGTa > 2:654711/1‑228 (MQ=255) aaCGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTa < 1:224319/227‑1 (MQ=255) cAGGTCAGGCAGGATGAAGCAGGTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTg < 1:139717/228‑1 (MQ=255) cAGGTCAGCCCGCAGCAGGCAGTTTGGGTCGCCGCGACGTACGGCGGCAGTGGGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACTTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTg < 1:691213/228‑1 (MQ=255) ggTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGGCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAACCGTTTTTTTTCCTGTTTGTACTTCTGcg > 1:592260/1‑227 (MQ=255) gtgagccagcAGCAGGGAAGTGGGTGCGCCGCGACGTACGGCGGGAGTTTGGTAGGCGATATCGGCCACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGACCCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAg < 1:676851/225‑1 (MQ=255) ggtagccgggAGCGGGCAGTTGGGGCCGCCGCGACGTACGGCGGCATTGCGGTAGGCGACATCGGCAACGGTAACTGGCAGGGTTGAGGCGTGCCCCTGAACCGTCATGCCCTGCGAATCGCCCACCAGCATGACGTTAAGTCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAg < 2:609448/225‑1 (MQ=255) gccggccaggAGCCGGCAGGTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAg < 1:654711/224‑1 (MQ=255) ccagcAGCAGGCAGTTTGGTGCCCCGCGACGTGCGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAgg < 1:258151/228‑1 (MQ=255) gcagTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATAACGGCAACCGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCTAATCGCACACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATggtggt < 1:576780/228‑1 (MQ=255) aggTTGGGTGCG‑CGGGAGGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATggtggt < 1:201679/224‑1 (MQ=255) agTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATggtggt < 1:112694/226‑1 (MQ=255) agTTTGGGGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATggtggt < 1:386589/226‑1 (MQ=255) agTTGGGTGCGCCGGCACGTACGGCGGCAGTTGGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATggtggt < 1:482885/226‑1 (MQ=255) tttGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTtc > 2:20605/1‑128 (MQ=255) ttGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTtca < 1:20605/128‑1 (MQ=255) ggTGGGGCGCGAGGTTGGGGGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTc < 2:361383/228‑1 (MQ=255) gTGCGCCGCGACGGACGGCGGCAGTGTGGGAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTc < 1:690298/227‑1 (MQ=255) gcgcCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTACCTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCCTCATCAGCCAACGGTTTGGACAAGCAATAGTCATACGCGGGGGTGGTCGCCAAACGTTTTTTTTCCTGATTTTACTTCTGCAGTAAGGAGACGGTGGCAGGTTTCTTa > 2:285278/1‑228 (MQ=255) gcgcCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCGGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATa < 2:448172/228‑1 (MQ=255) cccggGACGTCAGGCGGCAGTGGGGTAGGCGATAGCGGAAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATaa < 1:674804/226‑1 (MQ=255) cgcgACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGGGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCt > 1:466266/1‑142 (MQ=255) cgcgACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTACTGTTTGTAATTCTGCAGTAAGGGGATGGTGGTAGGTTTCATAACGt > 1:222922/1‑228 (MQ=255) gcgACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGGGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCta < 2:466266/142‑1 (MQ=255) gacggtaggcggcAGTGTGGTAGGCGATACTGGAAACGGTAACTGGCAGGGTGGAGTAGTTCCCCTGAACCGTCATGCCCAGAGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATc < 1:683381/221‑1 (MQ=255) gggcAGTGGGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAAt < 1:85231/227‑1 (MQ=255) gtgtGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTCTAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGTTAAATTg > 1:695802/1‑225 (MQ=255) tAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTtgtg < 1:506397/227‑1 (MQ=255) tAGGCGAGATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCTCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATATTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTtgtg < 1:178565/227‑1 (MQ=255) ggCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGAtgttgt > 1:106410/1‑224 (MQ=255) gCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTtgtg < 2:106410/224‑1 (MQ=255) tatCGACAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTAATGCCCAGCGAATAGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGCcgc > 1:268082/1‑136 (MQ=255) gagcGGCAACGGTAACTGGCAGGGGGGAGTGGTGCCCATGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCATTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTc < 2:376127/222‑1 (MQ=255) cGGTTACTGGCAGGGGGGGGTCGTGCCCATGAACCGTCAGGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCAGCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTAt < 1:105364/227‑1 (MQ=255) ggTAACTGGGCGGGTGGGGTCGGGCCCCTGAACCGTCATGGCCAGCGAAGTCCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCa < 2:42112/228‑1 (MQ=255) aGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATc > 1:42112/1‑217 (MQ=255) ggTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAACAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAAAGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCGGTCTGGCATTTTATCAGTCACATtggtg > 1:255463/1‑228 (MQ=255) aggAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCCTCCGCAAAGAGTTTGGCACACCTATAGTCATAAGCGGTGATGGTCGCGCAACGTTTTTTTTCCTGt > 2:60297/2‑131 (MQ=255) gAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTgggg > 1:359634/1‑227 (MQ=255) | GGCACGTTCGGTCAGCATTTGTACGGTTTCTACCAGCCACTCACCGCCTTCAATTTTGACCATGTTAGCACCGGCACGCATAACCGTTGCGGCGTTTTCGAAGGCTTGTTCCGGCGTG‑GCATACGCCATAAACGGCAGGTCAGCCAGCAGCAGGCAGTTTGGTGCGCCGCGACGTACGGCGGCAGTGTGGTAGGCGATATCGGCAACGGTAACTGGCAGGGTGGAGTCGTGCCCCTGAACCGTCATGCCCAGCGAATCGCCCACCAGCATGACGTTAAGCCCTTCATCAGCAAAGAGTTTGGCGAAGCTATAGTCATAAGCGGTGATGGTCGCGAAACGTTTTTTTTCCTGTTTGTACTTCTGCAGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGG > NC_000913/149212‑149661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |