| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,321,743 | T→A | 7.3% | G567G (GGT→GGA) | atoS → | sensory histidine kinase in two‑component regulatory system with AtoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,321,743 | 0 | T | A | 7.3% | 187.1 / 2.0 | 78 | G567G (GGT→GGA) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC |
| Reads supporting (aligned to +/- strand): ref base T (32/34); new base A (4/2); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
GATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATTGTGCG > NC_000913/2321518‑2321967 | gATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGCCAACGGCTGTGGCATTGTTCCCTCGCCGCAAAAAAAAATCTTCGCACCCTTTTTTCCCCCCAAAACCCCAAGAAACGGGCTTGGTcc > 2:425760/1‑227 (MQ=255) gATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGACTGGCGTTAAGt > 1:168031/1‑228 (MQ=255) aaCAGCTCAAACAGGTACTAATGAATATCCTGATCAATGCCGTGCAGGCTAACAGCGCACGAGGGAAAATTCGCATTCAAACCTTGCAATACAGCTACTCCAAACAGGCCATTTCGATAGA‑GGACAACGGATGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTAAACGca < 2:94211/228‑1 (MQ=255) cTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTCCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGTCGTTAAGTCACCTCACCAtt > 2:223597/1‑228 (MQ=255) cTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCACACGCTGCAAAAAAAAAATTTCGATCCCTTTTTCACCCCCAAAGCCTCAGGAACCAGACTTTGACAGTCCTTAAGTCAACCcacaatg > 2:274286/1‑223 (MQ=255) aaacgtgTACTACGGAATTTCCCGAACAACGCCGTCCAGGCTATCCGCGCACGAGGGAAAATTCGCATTCAAACCGGGCAATACAGCGACTCACAACAGGCCATTTAGATAGA‑GGACAACGGCTGTTGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt < 2:168031/222‑1 (MQ=255) aaaCAGGTCCTACTGAATATCCTGAACAATGCCGTCCAGGCTAACAGCGCACGAGGGAAAATTCTGATTCAAACCTGGCAATACAACGACTCACAACAGGCCATTTCGATAAA‑GGACAACTGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt < 1:34257/228‑1 (MQ=255) aaaCAGGGACTACCGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt < 1:223597/228‑1 (MQ=255) agagacagccactGAATACCCTGATCAATGCCGGCCAGGCTAACAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt < 1:676821/217‑1 (MQ=255) aaCAGGTCCTACTGAATATCCTGATCAATGCCGTACAGGCTATCAGCGCACGAGGGAAAGTTCGCATTCAAACCTTGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt < 1:251440/227‑1 (MQ=255) gtgacttatGAATAGTCTGACCAATGCCGTCCCGGCTATCAGCGCACGAGGGAAAATTCGAATTCAAACCGGGCAATACAGCGACTCACAACAGGCCAATTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCa < 2:121506/220‑1 (MQ=255) gTACTACGAAAAACCCTGATCAAGGCCGTCCAGGCTAACAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGCATCACCACAGGCCATTTCGATAGA‑GGACAACGGCTGTTGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCAt < 2:656690/228‑1 (MQ=255) tactacTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCAt > 1:475714/1‑227 (MQ=255) tactacTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAAAGGCTGTGGCATTGATCTCTCGCTCCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAATCCTCAGGAACCGGGCATGGTCTCGCGTTAATCCAACGCATCACTAATGCCCAt > 1:633795/1‑227 (MQ=255) tactacTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCACACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCAt > 1:694654/1‑227 (MQ=255) tatCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGCCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGGCCGACGTTAACTAAACGCCTCATTAATGCCCACCCGGGGGat > 1:597983/1‑226 (MQ=255) ccTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCCAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGAAACATTAATGACCATCAGGGGGGTATTcg > 2:473093/1‑228 (MQ=255) ccTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTAACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCTTCATTAATGCCCATCAGGGTGATATTcg > 1:546607/1‑228 (MQ=255) ccTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGATGTGGCAATGATCTCTCACTCCAAAAAAAGATCTTCGATCCCTTTTTCACACCCAAAGCCTCACGAACCGGGATTGGGCTGGCGTTTCTTAAAACCAAAATTAACGCCCACCAgggcgggtcgct > 2:676821/1‑219 (MQ=255) aTGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGCGGACATTCGCGTCGcc > 1:224431/1‑227 (MQ=255) gCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGt < 1:204559/171‑1 (MQ=255) tCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGCTAGA‑GGACACCGGCTGTAGCATTGATCTCTCTCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAATTCAACCCATCATTCATGCCCATCAGCGTGTTATTCGCGTGCCCAttttac > 2:697942/1‑226 (MQ=255) tCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGGGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTATGCCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGGAATTCGCGACGCCAGTTTg > 1:683973/1‑227 (MQ=255) gatATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGc < 1:605774/226‑1 (MQ=255) tCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAACGATCTTCGAACCCTTTTTCACCACCAAAGCCCCAGGAACCGGGATTGGTCTGCCGTTAGGTCACCGCACCATTAATCCCCACCACGGTGATTTTTCGGTGGCCGTTTTCCCGGGCtca > 2:583346/1‑225 (MQ=255) cAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGCTCTTCGCTCCCTTTTTCACCACCCAAGCCTCAGGAACCAGGCTTGGTCTGGCGTTCAGCCAACGCACCATTAATGCCCATACGGGCGCAATTCGCGCCGCCAGTTTTCCGGGCTCCg > 1:203136/1‑227 (MQ=255) cgcACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGGGATATTCTGGTCGCCGGTTTGTCGGGCTACGgc > 1:677221/1‑226 (MQ=255) aaTTTGCATTCAAAACTGGCATAACAGCGACTCACAACAGGCCATTTCGATAGG‑GGACAACGGCTGTGGCATTGATCTCCCGCTGCAAAAAAAGATCTTCGAACCCTTTTTCACCCCCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCAc < 2:26391/225‑1 (MQ=255) aaTTCGCATTCAAACCTGGCAATACAGCGACTCACAAAAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCAc < 1:68234/225‑1 (MQ=255) cgggCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATc < 1:10739/224‑1 (MQ=255) ggCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGACTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCGGTTTGCCGGGCTACGGGCCAACCTTCACCCTTAgtttccagcccaacc > 2:655672/1‑217 (MQ=255) aGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGa > 1:114093/1‑228 (MQ=255) cGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAAc > 1:399781/1‑131 (MQ=255) cGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAAACGGGCTTGGTCTGCCGTTAAGTCAACGCATCATCAATGCCAACCGGGGGGATATTGCGGTCGCCAGTTTCCCGGGCTAAGCCCCCCCCTTACAGCTTTTTTTACCCACCGAccccaccgggaa > 2:272422/1‑219 (MQ=255) cGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAAATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGGCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGGGATATTCACGTACCCAGTTTGCCGGTCTACGGCGCCACCTTCACGCTTATTTTACCGTCCACCCCCCCGGGaac > 2:599386/1‑227 (MQ=255) gACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACg < 2:399781/131‑1 (MQ=255) caCTCACAACAGGCCAATTCAATAGA‑GGACAACGGCTGTGGCATTGATCTCTCTCTGCAAAAAAAGATCTGCGATCCCTTTTACACCACCAAAGCCTCAGGAACCGGGCTTGGACTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAAt < 1:655672/227‑1 (MQ=255) aCTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGCTATTCGCGTCGCCCGTTTGCCGGGCTACGGCGCAACCTTCCCCCTTATTTTACCCATCAACCCGCCGGGaaac > 2:467213/1‑226 (MQ=255) gcaacaGGGCATTTCGATAGA‑GGCACACGGCTGGGGCATTGATCTCACGCTGCAAAAAAAGATCGTCGAGCCCTTTTTCACCACCAATGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTGGCCGGGCTACGGCGCAACCGTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa < 1:408002/226‑1 (MQ=255) agaccATTTCGA‑AGAGGGCCAACGGCTTTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGGTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTAt < 2:133583/225‑1 (MQ=255) ggCCATTTCGATAGA‑GGACCACGGCTGTGGCATTGATCTCCCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTAt < 1:467213/227‑1 (MQ=255) gCCATTTCTATAGT‑GGCCAACGGCTTGGGCATTTAATCCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCCACACCAAAGCCTCAGGACCCGGGCTTGGTCTGGCGTTAAGTCAACGACTCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGa < 2:570450/228‑1 (MQ=255) gCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGa < 1:274286/228‑1 (MQ=255) gCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATACCTTTTTCACCACCAAAACCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCCGGCTACGGCTCAACCTTCACGCTTATTTTACCGATCAACCTGCAGGGCAATCAGACTGTATg > 1:697198/1‑227 (MQ=255) gCCATTTCGATAGA‑GGACAACGGCCGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCCCAGGGAAATCAGACTGTa > 1:133583/1‑225 (MQ=255) ttCGATAGC‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCTGGCTACGGCGCAACCTTCACGCTTCTTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGc > 1:518197/1‑227 (MQ=255) ga‑gGACAACGGCTGGGGCATTGCGCTCTCCGTGCAAAAAAAGATCTTCGATCACTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAAt < 1:630142/227‑1 (MQ=255) ga‑gGAACACGGCTGTGGCATTGATCTCCCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAAt < 2:114093/227‑1 (MQ=255) a‑gGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGAGCCCTTTTTCACCACCAAAGCCGCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCg < 1:543963/228‑1 (MQ=255) gACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGCCTGTATGACTGCTATTAATCGCa > 1:600714/1‑228 (MQ=255) aaaCGGCTGTTGCATTTATCTCTCCCTGCAAAAAAATATTTGTGGTCCCTTTGTCCCCCCCAAAGCCTGAGGAACCGGGCTTGGTCTTGCTTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATc < 2:224431/227‑1 (MQ=255) cGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGCAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTCTTTGACTTCTTTTAATCGCATCCtt > 1:402619/1‑228 (MQ=255) gCTGTGGCATTGATCTCTCCCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTAt < 1:425760/228‑1 (MQ=255) gtgGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATtgt > 1:418525/1‑228 (MQ=255) gtgGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGATTTACTGCTATTAATCGCATCCTTTTtgg > 1:564950/1‑227 (MQ=255) gtgGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGGGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTCTTTTACCGTTCAACCCGCAGGGTAATCAGACTGTATGACTGCTATTAATCGCATCCTTAtttt > 1:242282/1‑226 (MQ=255) tgGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGCCTGCTATTATTCGCATCCTTATtggg > 1:655571/1‑226 (MQ=255) ttGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCa > 1:369340/1‑103 (MQ=255) tGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCAt < 2:369340/103‑1 (MQ=255) cccgttGCAAAAAAAGATCTTCGATCCCTTTTTAACCCACCAAGCCTCAGGAACCGGGCTTGGTCTGGCCGTAAGTCAACGAATCATTAATGCCCATCAGTGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGAt < 2:694654/223‑1 (MQ=255) tGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGt < 1:253144/228‑1 (MQ=255) gCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAACGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGTCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATTACTGCTATTAAACCCATCCTTATTGGGGATGATGAAGATAAt > 2:564570/1‑225 (MQ=255) gCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATCATGAAGATAATGtt > 1:470182/1‑228 (MQ=255) gATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGc > 1:387617/1‑227 (MQ=255) gtCCCTTTTTCCCCCCCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCAc < 1:497713/227‑1 (MQ=255) aTCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCAc < 1:564570/228‑1 (MQ=255) aTCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCAc < 1:697942/228‑1 (MQ=255) aTCCCTTTTCCACCACCAAGGCCTCAGGAACCGGGCTTGGGCTGGCCTTAAGTCAACGTATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCAc < 1:110791/228‑1 (MQ=255) cccTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCGGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGTTGAAAATAATGTTCGCCGTATTCTGAGCCCCg > 2:482133/1‑228 (MQ=255) ttttCACCACCAAAGCCTCAGGAACCGGGCTTGGACTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGCTCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGAGGATGAAGCTAAAGTTCGCCGAATGATGAGCACCCCttt > 1:502167/1‑228 (MQ=255) ttCACCACCAAAGCCTCAGGAACCTGGCTTGGTCTGGCTTTAAGTCCACGCATCATTAATGCCCATCAGGGTTATTTTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTg < 1:693239/228‑1 (MQ=255) ttCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCCTTAAGGCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTg < 1:677122/228‑1 (MQ=255) accaAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCCTCCTTTTTGTGGATGATGAAGATAATGTTACCCGAATGCGTAGCCCCCCTTTTGccccac > 2:601052/1‑223 (MQ=255) caATGCCTCCGCATCCGGGCTTGGTCTGACGTTAATGCATCGCATCATGACTGCCACACAGGTTGATATTCCCGTCGCCAGGTTGCCGGGCTACAGCGCAACCTTCACGCTTCTTTTACCCATCAACCCGCAGGGAAATCAGACTGTATGACTGGTATTAATCGCATCCTTAATGTGGATGATGAAGATAATTGACGCCGTATTCTGAGCACCTCTTTGGCACTACaa < 2:103016/228‑1 (MQ=255) ccggAACCGGGTTTGGGCTGGGGTTAAGGCAACGCCTTATTAAGGCCCATCAGGGTGATATTCGCGGCGCCAGTTTGCCGGGCTACGGGGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGa < 2:655571/226‑1 (MQ=255) aGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGa > 1:75723/1‑227 (MQ=255) aGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGa < 2:75723/227‑1 (MQ=255) cTTGGACTTGAGTTAAGACACCGCATAATTAATGCCCACCAGGGTGATAGTCGCGTGCCCAGTTTGCCGGGGTACGGCGCAACCTTCACGCTTATTTTACCGATTAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATtgtg < 2:470182/228‑1 (MQ=255) ttgTCTGGCGTTAAGTCATCGCTTCATTAATGCCCATCCGGGTGATTTTCGCGTCGCCAGTTTGCCGTGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATTGTGCg < 2:683973/226‑1 (MQ=255) | GATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGA‑GGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATTGTGCG > NC_000913/2321518‑2321967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |