| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,411,025 | T→C | 13.1% | S110G (AGT→GGT) | yfbS ← | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,411,025 | 0 | T | C | 13.1% | 143.9 / 3.0 | 62 | S110G (AGT→GGT) | yfbS | putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (28/24); new base C (3/6); total (31/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
ACCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGA > NC_000913/2410802‑2411249 | aCCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCAt > 1:116760/1‑227 (MQ=255) gtTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGCATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGGGCCAACcccc > 1:428875/1‑228 (MQ=255) aaGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCCTCATACGTGACGCCGCCGGTTGCATACGCATGGCCACGCTTAACACCACGGGAATAAAGACAGGGGCAAACCCGGTTGAACCCAAAAACACGCCAAACCCCGCAACggcg > 2:285817/1‑226 (MQ=255) aaggctcgATAGCCGCCACGCAGCAATTCACTGGTGACTACCAGGTCCGGCGGCGTAGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATcaac < 1:285817/221‑1 (MQ=255) aGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAACCCCGCGACGGCCAGCATcaaca > 1:15919/1‑228 (MQ=255) aGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAACAAAGATAGCGCAAACGCCGGTTTCACTCATAAACGCGCCAAGCCCCCCGACGGCCAGCATcaaca > 2:586061/1‑228 (MQ=255) tccccccaccaATTCTCTTTTGACCACCAGGTTCGGCGGCGGCGCCCCCAGCGTAATCATGCCGCTAATCAGCCCGGCAAAACTTACCGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACAtttt < 2:355764/219‑1 (MQ=255) cACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCACAGCTTAACACCACGGGAATAAAGATAGCGGCAACGCCGGTTTAACTCATAAACACTCCAAACCCCACCACAGGCAACACACACAAAACCAAACttttt > 2:401644/1‑226 (MQ=255) aCGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGGTGCGGCGACGTTTGCATACGCCTGGCAACCCTTAACACCCCGGGAATAAACATAGCGACAACCCCGGGTGAACTCATAAACCCCCCAAGCCCCCGCACGGTACACAACACCAAAACCaaaaaattac > 2:670349/1‑219 (MQ=255) cagcaATTCACTGTTGACTACCAGGGTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGAttt < 1:492349/227‑1 (MQ=255) tCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACCAttt > 1:8644/1‑227 (MQ=255) ttGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACCATTGCCCGc > 1:549470/1‑227 (MQ=255) ttGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAAAGCGCCAAGCCCCGCGACGGTAAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGc > 1:529734/1‑227 (MQ=255) aCTACCAGGTTCGGCGGCGTCGCCACCACCGACATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCCTCAGACGTCACGGCGACATTTGCCTACGCCTGACAACGCTTAACCCCACGGGAATAAAGATAGCTACAACGCCGGTGGACCTCAAAACCCCACCCATCCACACTACGTACAGCGCCAACAGAACCAACATTTTGATATCACCACTGCCCGCAACt > 2:238987/1‑228 (MQ=255) aCTACCAGGTCCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGTTCCGCATCAACAAAACCAACATTTTGATTTCACAATTGCCCGCAACt > 1:638147/1‑228 (MQ=255) cgggTGCGGCGGCGCCGCCACCAGCGTCATCAGGCCGATAAGCCGCCAGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGAc < 2:8644/226‑1 (MQ=255) aGGTTCGGCGGCGTCCCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCAGCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGAcc < 1:586061/228‑1 (MQ=255) ttCTGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACCGCGACGTTTGCATACCAATGGCAACGCTTAACACCACGGGAATAAAGCTAGCGAAAAACCCGGTGGATCTCATACACGCGCCAAGCCCCCCTAAGGTCACCGTCAACAAACCCACCATTTTGGTTTAACAATTCCCCGCACCCTTAACCaa > 2:383969/1‑226 (MQ=255) cGTCCTCGTGCCGCTAACCATCCCCGCAAAGCTTAACGGGACTATCAGGCCTGACGGCGACGTTTGCATACGCATGGCATCGCTTAACACCACGGGAATAAAGAGAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCCCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGc < 2:529734/228‑1 (MQ=255) cGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAAAATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTCCGGTGGc > 1:83579/1‑228 (MQ=255) atcatTCCGCGAACTCGCCCGGCAAAACTTAACGGGCTCATCGCACTTGCAGGCCAATTTGGCATAACGATGGCAACGCGTAAACCCACGTGAATAAAGAGAACCACAACGCCCGTTGACCCCAGAAACGCTCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTGTGACCAGCCATGTTCCGATTACGGTGGCAaca < 2:377538/228‑1 (MQ=255) atcagGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGACAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAaca < 1:211286/228‑1 (MQ=255) ccttGCCCCTAATCAGCCCGGAAAAACTTACAGGCATCACCAGACGTGAAGGCGACGTTTGCATACGCCTGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAacac < 2:116760/225‑1 (MQ=255) atGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGCCAGCATCAACCAAACCAACAATTTGATTTCACTATTGCCCGCAACTTTGACCAACCATGTTCCCCTTACGTGTGCAAAACCg > 2:145488/1‑228 (MQ=255) ccGTTAATCAGGCCGGCAAAACTTAACGGCATCAGCAGACGTGACGGCGACGTTTGCATACGCATGGCCACGCTTAAGTGCACGGGAATAAAGATAGCGACAACGCCGGTTTAACTCATAAACGCGCCAAGCCCCGCGACTGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 1:696957/228‑1 (MQ=255) ccGGTAACCCGCCCGGCAAAACCTAACGGCAACATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATCGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 1:187638/228‑1 (MQ=255) ccGCTAACCCCCCCGGAAAAAATTAACGGCACCATCAACCGTGGAGGGGACGGTTGCATACGCATGGCAACGCTTAAAACCACGGGAATAAAGATGGCGGCAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 2:627373/228‑1 (MQ=255) cTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCCTGTTCCCATTACGGTTGCAACACCGGTAct > 1:391721/1‑226 (MQ=255) cccGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCATCCATGTTCCCAttca > 1:304750/1‑199 (MQ=255) aaaagagacagcatcaGGCGTGACGGGGACGTTGGCATACGCATGGCAACCCATAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCaata < 2:434220/217‑1 (MQ=255) atcatcAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCAATTACGGTGGCAAAACCGGTACGGACCAAACCATCGCCAATAATAAACAAg > 1:162419/1‑228 (MQ=255) tcatcaGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATCAAGATAGCGACAACGCCGGTTGAACTCATAAACCCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAAAATTTTGATTTCACTATTGCCCGCCACCTTGACCACCCCAGTTCACATTACGTTAGCACAACCGGCACGGACCAAACACTCGCAAAAAAAAAACaaag > 2:314120/1‑226 (MQ=255) ccGGCGACGTTTGAAAACGCCAGGCAAACCTTAACACCCCGGGAATAAAGATAGCGACCACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 1:670349/227‑1 (MQ=255) aCGGCGACTTTTGCATCCGCATGGACACGAATACCCACACGGGAATAAAGATAGCGAAAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATGGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 1:539945/228‑1 (MQ=255) aCGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCaat > 1:434220/1‑205 (MQ=255) aCGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCCggc > 1:644033/1‑227 (MQ=255) ggCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACa < 1:145488/228‑1 (MQ=255) gACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATACTAAACAAGGCGGCAATCAGGACAAc > 1:96415/1‑227 (MQ=255) aCGGTTGCATACGGATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCTCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATGTCACTATTGCCCGCAACGTTGACCAGCCATGTTCCCATTACGGTGGCAACCCCGGTACGGACCAAACCATCGACAATAATAAACAAGGCGGCAATCAGGACAACGt < 1:211883/228‑1 (MQ=255) cGTTTGCATACGCATGGCAACGCTTAACCCCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCACCAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACg < 1:401644/226‑1 (MQ=255) cGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGTTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGtt < 1:314120/228‑1 (MQ=255) cGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCCTCGCCAATCATAAACAAGCCGGCAATCAGGCCAACGTTAGGATCAGaa > 1:402432/1‑228 (MQ=255) cATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTAAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTCAGGACCAAACCATCGCCAATAATAAACAAGGCGGCAAACAGACAAACGTAAGAATCAaaaa > 2:18692/1‑227 (MQ=255) cGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACAATCGCCAATAATAAACAAGGCGGCAAACAGAACACCGTTAGGGTCAGAAAAGCCGGaaa > 1:212077/1‑228 (MQ=255) ctgaaccacaagggAAAAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAAt < 1:2301/217‑1 (MQ=255) aaCACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGCCAATCAGGCCAACGTTAGGATCAAAAAACCCGGAAAATACt > 1:247463/1‑228 (MQ=255) aaCACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATAAACAAAACCAACAACTTGATTTCACTATTGCCCGCAACTTTGACCAGCCAAGTTCCCATTACGGTGACCACACCGGTACGGACCACACCACCGCCAACAATAAAAAAGGCGGCAAACAGGACAACGTGAGAAAAAAAAAAAACGGaaaaaaa > 2:533079/1‑224 (MQ=255) caccacGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTa > 1:111792/1‑134 (MQ=255) cacGGGAATAAAGATAGCGACCACGACAGTTGAACCCATAACCGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATCCTTCTgg < 1:533079/228‑1 (MQ=255) cGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCAt > 1:202111/1‑119 (MQ=255) tggAATAAATATAGCGACAACGCCGATTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTGTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 1:661445/187‑1 (MQ=255) gggAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCCCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 1:333401/228‑1 (MQ=255) gggAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTTCCCGCAACTTTGACCAGCCATg < 2:202111/119‑1 (MQ=255) gggAATAAAGATAGCGAAAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 1:153443/228‑1 (MQ=255) cggAATAAAGACAGCCAACACGCCGGTTGAACTCATAACCGGCCCAAGCCCCGAGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACGTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 2:83579/227‑1 (MQ=255) aaaaaagtgCGACACCCCCGGTTTACCTCATAACCGCGCCCCCCCCCGCGCCGTTCATCACCAACAAAGCCACCATTTTGAGTTCACTATTGCCCGCAACGTTGACCAGCCAGGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑a < 2:428875/220‑1 (MQ=255) cGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACgg > 1:653/1‑45 (MQ=255) gACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGt < 2:653/45‑1 (MQ=255) caaaCGCCGGTTGAACGTAAACACGCCCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAGCATGTTGATTTCACTATTGCCCGCAACTTTGACCAGCAATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCATAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCtt < 1:697599/226‑1 (MQ=255) aCAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAACCGGAAAAAACTTCTGGGAC‑GTCAAGCGTTCCGCta > 2:391665/1‑227 (MQ=255) ggTTGAACCCATAAACGCGCCAAGCCCCGAGCCGGCCAGCATCAACAAAACCAACATTTTGATTTCCCCATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCaaa < 1:677566/228‑1 (MQ=255) aaCTCAATAACGCGCCAAACCCCGCGGCGGGCAGGATCAAAAAAACCAACATTTTGATTTCACTAATGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGa < 1:49824/228‑1 (MQ=255) | ACCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGA > NC_000913/2410802‑2411249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |