| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,862,956 | G→A | 19.3% | pseudogene (648/1617 nt) | glvC ← | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,862,956 | 0 | G | A | 19.3% | 92.3 / 2.2 | 53 | pseudogene (648/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base G (24/16); new base A (8/2); total (33/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTGCGCCGAT > NC_000913/3862732‑3863183 | aTGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGCAGTTGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCTAGTACGGGTTAAACCCAAAc > 1:304321/1‑227 (MQ=255)aTGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCCGCGCCCAGGACATCTGAATTCCGCCTTC‑CACAGCTTCCGGACCAACGATAAACTTTCCGTAGCTGAGTTGGGGTAAACCGGTTGGGA‑‑CAGAAAAACGCTCGCGGAAAGGGaaaaccaaaacc > 2:19586/1‑228 (MQ=255) cGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGGGTAACCCGGTTGGGA‑TCAA‑AATACGATCGCGGAAGGAGGAAACCCAAACCC‑CAAgcg > 1:258530/1‑226 (MQ=255) ggCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACCGAACTCCTGCAGATACTGCGCCCAGTACACCTCAATGCCGCCTTC‑AACAGCTGCCGGCACAAAGAAAAACATTCCGAAGACGAAGGGGGTTAAACCGGGGGGGACCCAG‑AA‑AAGTTCGAGGAACAGGGAAACCAAAAACC‑CAAGAGc > 2:250894/1‑228 (MQ=255) ttttGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGACCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AAAACGTCACAGGAAAGTGCAAACCACAACCC‑CAAGGCGACCCGGCGaaac > 1:443572/1‑226 (MQ=255) gAGTTACCGGGCAGGGCAAACCCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCACAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAgg < 1:41318/228‑1 (MQ=255) aCCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTCGATGAAGTGGCGTAAACCGGTTGGGA‑TCAG‑AAAACGTTCGGGGAAGGGGCAAACCCAAACCC‑CAAGGGCACACCCCGAACCCCGGAACGc > 2:200850/1‑228 (MQ=255) aCCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGCTGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGGGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACga > 1:78242/1‑227 (MQ=255) aCCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGGGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACg > 1:650436/1‑227 (MQ=255) ggCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTAAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTTGGA‑TCAG‑CATACGTTCGAGGAAGGTGTAAACCCAGACCCACAAG‑GCACCCGCCGAACTAAGGAAAGCTTCCagctg > 1:691349/1‑225 (MQ=255) gCAAAACCGCCTACCGGAAAAAACGATTCCAGCGGCTCGGCGCTCAAACGGACCCCTTGCAAATGCTGCGCCCAGTACATCTGAATGCCGCCTGC‑AACGGCTGCCGGACAAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATCCGTTCGAGGAAGGTTTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCa < 1:660790/223‑1 (MQ=255) aaCCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGGGTAAACCCAGACCC‑CAAGGGCACCCGCCGAACCCCGGAAGGCTTTCaagaattca > 1:539806/1‑219 (MQ=255) ccTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCCAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAATCCACACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATcccc > 1:593727/1‑228 (MQ=255) ccTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATcccc > 1:484681/1‑228 (MQ=255) cGGGAACAACGATTTCAGCGGCTCGGCGGTCAAACTGAACTCTTGCAGATGCGGCGCCCAGGACATCGGAATGCCGCCTTC‑AACCGCTGCCGGACCAAAGAAAAACTGTCCGTAGATGAAGTCGTGTAAACCGGTTGGGA‑TCAG‑AAACAGGTCGAGGAAGGGGGAAACCAAAACCC‑CAAATGCACCCCCCAAATCCAGGAAGCCGTGCAAAGAGTCAACCCCCAATTg > 2:666179/1‑228 (MQ=255) tGCAGATGTCGCGCCCAGTAAATCGGAAGGCCGCCTTC‑AACAGCCGCCGGCCCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATTCGGTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGatc < 1:83245/228‑1 (MQ=255) gctgcGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAAACCC‑CAAGTGCACCCGCCGAACTCAGGAAGGCTTGCAGGACTCCAATCCCCATTTGTACTTTTGGCCGGCCACGCACCGGCACCCAGG‑CCCACGGGCTCACCCCCa > 2:240749/1‑228 (MQ=255) tgcGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGGGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAAATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCACCCAGG‑CCCAGGGGATAAACCCCAga > 2:140695/1‑227 (MQ=255) gcgcCATGTACTTCGGAATGCCACCTGC‑AACAGGTGCGGGACCAAAAGAAAATGGTCCGTGAATGCATGGGTTTAACCCGGTTGGGC‑TCAG‑AATCCGTCCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCGCCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTCGGCCAGCCGAGCAACGTCACCCAGG‑CACAGTGGATCATCACCAGGa < 2:492142/228‑1 (MQ=255) ccAGTACATCGGAATGCCGCCTGC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTGGGGA‑TCAG‑AATACGTTCGAGGAAGGGGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAgg < 1:240749/227‑1 (MQ=255) tACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATa > 1:226492/1‑228 (MQ=255) tctaaggccgacTTC‑AACAGTGGCCGGACAAAAGAAAAACGGTCCGAGAAGGAAGTGGTGTAAACCGGTTGGGA‑TCAA‑AATACGTTCGAGGAAGGTGAAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATcac < 2:539806/222‑1 (MQ=255) cTGAATGCC‑CCTTCAAACAGCTGCCGTACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATcac < 1:416901/228‑1 (MQ=255) tGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGCGATTCAATCCCCATTTGTACTTTTGGCCAGCCCCGCAACGTCAGCCAGGACACGGGGGA‑CATCACCAGTAAGGCGGTaaactttc > 2:7287/1‑219 (MQ=255) tGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTAAGCCAGG‑CCCAGGCGATAATCCCCAGGAAGGCGAAAAACacaacaa > 2:143660/1‑227 (MQ=255) tGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGGGCACCCGCCGAACGAAGGAACGCTTGCACAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTAAGCCAGG‑CACAGGGGATCATCAACAGGAAGACGAAAATcacacaaa > 2:304323/1‑223 (MQ=255) gccgccTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAAt < 1:143660/219‑1 (MQ=255) gccgccTTA‑AAAAGCCGCCGGACCAAAGATAAACTGGCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAgg < 1:7287/208‑1 (MQ=255) cgccTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAAACCC‑CAAGGGCACCCGCCGAACGCAGGAACGCTTTCAGACATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTAAGCCAGG‑CACAGGGGAACATCACCAGGAAGGCGATAAACCCCACAAAAg > 2:417431/1‑228 (MQ=255) ccTTA‑AAAAGGTGCCGGACCAAAGAGAAAGTGCCCGTAGATGAAGTGGTTTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGAc < 1:140695/228‑1 (MQ=255) tC‑AACAGCTGCCGGACCAAATATAACCTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CCAGTGCACCCGCCGAACGCAGGAACGCTTGCCGAGAGTCAATCCCCATTTGTACTTTTGGCCACCCTATCACCGTCAGCCAAG‑CCCACCGGATCATCACCAGGACGGCGCTAAACACCAACAAAGACGt > 2:28628/1‑227 (MQ=255) tCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGCAAATGCCGAGAAAAACCGGCAg > 1:144937/1‑228 (MQ=255) tCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAg > 1:118168/1‑228 (MQ=255) tCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAAAGTCAGCCAGG‑ACAATGGGATCATCACCAGGACGGAGATAATAACCACCTAAACAGGCCCCTGGAAAATACCGGGAAAAACCGGCAg > 2:469407/1‑228 (MQ=255) cggaGATGAAGGGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGCGAAAAACCGGCAGtt > 1:454760/4‑228 (MQ=255) gtgggttAAACCTGTTGGGA‑CCAG‑AACTCGTTGGAGGAAGGTGTAAACCCAGCCCC‑CAAGTGCCCCCGCCGAACGCAGGAACGCTTGCAGAGATTCAACCCCCATTTGTACCTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGa < 2:93611/221‑1 (MQ=255) tgtggtAAACGGGTTGGGT‑CCAG‑AATGGGTTCGAGGAAGTGGTAAACCACTACCC‑AAGGTGCCCCCGCCGAACGGAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCACTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGaa < 1:48086/223‑1 (MQ=255) ggccaaacccGGTTGGGC‑TCAG‑AATACGTTCGAGGAAGGGAGAACCCCAAACCC‑TAAGGTGACCGGCCGAAGGCAAGAACGCTTGCCGAGATTCAATCCCCGTTTGTACTGTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCAGCCCTTAAGGCGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACa < 2:593727/220‑1 (MQ=255) ttGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGGCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCCCCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGGTTTTTATCGAACAAAcaggtaaaca > 2:4722/1‑219 (MQ=255) gctCAG‑AATATATTGGAGAAGTGTTTAAACCCAGCCCC‑CACGTGCCCCCGCCGAACGCAGGGACGCTTGCAGAGACTCAATCCCCCTGTGTACTTTAGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAgc‑gc < 2:258530/226‑1 (MQ=255) gTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCGGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCACCTGGACAATGCCGAGAAAAACCGGCGGTTTTTTATGGAACAGACGGTTATTCAGC‑GCCGTCCCAAGGc > 1:685818/1‑228 (MQ=255) gTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAAtcc > 1:78922/1‑226 (MQ=255) gAGGAAGGGGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGa < 1:19586/228‑1 (MQ=255) gAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGa < 1:304323/225‑1 (MQ=255) ggTGTAAACCCAGACCC‑CAAGTGCACCCGCTGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAACTGCCGAGAAAAACCGCCAGTTTTTTATCGACCAGACGGTTATGCAGC‑GCCTTCACACTGCCGGAAATgca > 1:419000/1‑226 (MQ=255) gtgtAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACAACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGACAAGACGGTTATGAAAC‑GCCGTCCCAAGACCGGAAATgcga > 1:664218/1‑225 (MQ=255) tAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTACCGAACAAACGGTTATGCAGC‑GCCGTACCAAATCCGGAAATAAAAAtt > 2:465070/1‑228 (MQ=255) aaaCCCAGACCC‑CAAGTGCCTCCGCCGAACGCAGGAACGGTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGATATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTg < 1:469407/228‑1 (MQ=255) aaaCCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCCTTTGTACTTTTGGCCAGCAGAGCAACGTCAGCCAGG‑CACAGGGGTTCATCACCAGGAAGGCGATAATCACCCGAACAGCCGTCCCCTGGAAAATGCCCAGAAAAAACGGCCGTTTTTTATAGAACGAACGGTCATTCCCC‑GCCGTCACAATGACGAAAATTAGAAttc > 2:34214/1‑227 (MQ=255) aaCCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCGGGAAAAAGCCGGAAAAAACCGGCCGTTTTTTTCCGAACAGCCGGGTA‑GCAACAGCCGAACCAACGCCGGAAATgtaaaatga > 2:429124/1‑220 (MQ=255) ccccAGCCCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTgc < 1:200850/226‑1 (MQ=255) aCCCACACCC‑CAAGCCCACCCGGCGAACGCAGGAACGCTTGCAGAATTTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTgc < 1:305673/227‑1 (MQ=255) aCCCAACCCC‑CAGGGGCACCCGCCGAACGCAGGAACGGTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGGCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGG‑‑AATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTgcgc < 1:250894/227‑1 (MQ=255) aGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGACAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACAACATAAAACGTCCCCTGGTAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTgacacag > 1:269540/1‑222 (MQ=255) gACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGGACCGACGGGTAAGCAGC‑GCCGTCAAAAAGCCGGAAATGATAATTGCGCCGaa > 2:110218/1‑227 (MQ=255) gACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCACCTGGAAAATGCGGAGAAAAACCGGCAGTTTTTTATCGAAACACCGGGTAGGCAGC‑GCCGCAACAATGCCGGGAATGATAATTAGGCCGAt > 2:456038/1‑228 (MQ=255) gACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCAAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAAGGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTAACAAGGCCGGAAATGATAAtttgaccgaa > 1:656309/1‑220 (MQ=255) gACCC‑CAAGTGCACACGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAAGGAATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTACAAAAGCCGAGAATGCTAATTGCGCCGAt > 1:192181/1‑228 (MQ=255) | ATGCCCACGGCACCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTC‑AACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTGGTGTAAACCGGTTGGGA‑TCAG‑AATACGTTCGAGGAAGGTGTAAACCCAGACCC‑CAAGTGCACCCGCCGAACGCAGGAACGCTTGCAGAGATTCAATCCCCATTTGTACTTTTGGCCAGCCGAGCAACGTCAGCCAGG‑CACAGGGGATCATCACCAGGAAGGCGATAATCACCACATAAGACGTCCCCTGGAAAATGCCGAGAAAAACCGGCAGTTTTTTATCGAACAGACGGTTATGCAGC‑GCCGTCACAATGCCGGAAATGATAATTGCGCCGAT > NC_000913/3862732‑3863183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |