| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,304,821 | T→C | 6.6% | N593D (AAC→GAC) | yjcS ← | metallo‑beta‑lactamase superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,304,821 | 0 | T | C | 6.6% | 177.1 / 4.8 | 61 | N593D (AAC→GAC) | yjcS | metallo‑beta‑lactamase superfamily protein |
| Reads supporting (aligned to +/- strand): ref base T (38/19); new base C (2/2); total (40/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-02 | |||||||||||
CAAAAGCGAGTGACATTAATTTGGGGTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCGCGCCGGTCAGGT > NC_000913/4304597‑4305039 | cAAAGGCGAGTGACATTAATTTGGGGTTACGATATTCACCCACAAATCGAAATTATCCAGACGGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGTTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAg < 1:321295/228‑1 (MQ=255) gAGTGACATTAATTTGGGGTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGCTCAGCACGCTCTGCCGATCTTCCCGGCCGTTGTAGACATAGGCGTCCGCTTGCGGTTGCGCCGTTTTCCGGTAGTTAATCCCGCTa > 1:67242/1‑228 (MQ=255) gTGACATTAATTTGGGGTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCGGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGGTTTCCGGTGGTTAAGCACGCTATc > 1:525766/1‑228 (MQ=255) gggTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAATAGGCGTCGGCTTGCGGTTGAAGCGTTTTCCGGTAGTTAAGCACGCCATCGTTCAGCGTCCgg > 1:100436/1‑227 (MQ=255) gtttattattttCCCCCACAATGCAAAATTTTCCGTACGGGGGATAGTTTTTTCCGTGTTCGCGCCATTGCCATTATTTTTGGTTTTCTCCGCTTTTACCAGTCCCGCCCTTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGtt < 2:263968/218‑1 (MQ=255) ggTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTTTCCGGTCAGCCCGGCGTGCAGATCTTCACGGGTGTTGGAGAAAGAGACGCCGGCTTGCGGGTGCAGCGTTTTCCCGTAGTTAAGAACGCCACCGTTCAGCGTCCgggg > 2:459856/1‑226 (MQ=255) aCGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGCgg > 1:353044/1‑228 (MQ=255) aCGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAgg > 1:263968/1‑228 (MQ=255) cGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGGAGCGTTTTCTGGTAGTTAAGCATGCTATCGTTCAGCGTCTGGGTTAgg > 1:270142/1‑227 (MQ=255) ccACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑GTATTGCCGtt > 1:205608/1‑228 (MQ=255) caAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGTATTAGAAAGAGGCGTCGGCTTTCGGTTGCACCGGTTTCCGGTAGTTAAGACCGCTATCTGTCAACGCAAGGTTGGGG‑GTTTCCCCTTTggc > 2:388690/1‑226 (MQ=255) caAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACg > 2:409202/1‑190 (MQ=255) caAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACg < 1:409202/190‑1 (MQ=255) caAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGCCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAACACGCTATCGTTCAGCGGCAGGGTGGGG‑TTGTCGcccattct > 2:205515/1‑222 (MQ=255) aaTCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCCGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCCGGGTGAGG‑TTATCGCCGTTGCTcc > 1:379123/1‑227 (MQ=255) aaTCAAATTTTTCCAGATCGGCGATTATTTTTTCCAGTTTCGCGCCATTGCCAATAATTGTGGCTTTCTCCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCa < 2:387730/228‑1 (MQ=255) aaaTTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCCCGGCTGATGTAGAAAGAGGCGTCGGCGTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCTGGTTGGGG‑GTGTGCCCGTTGCTCagt > 1:93324/1‑223 (MQ=255) tCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCCGATACTCACGGCTGGTGTAGAAAGATGCGTCGGCGTGCCGTTGCAGCGTTTTCCGGTAGGTAAGGCCGCTAGCGTTCAGCGTCAGGGTGAGGTTTACCCCCGTTGC‑CATTTTGAAAttg > 2:436208/1‑227 (MQ=255) aCAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGc > 1:197148/1‑227 (MQ=255) gCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGata > 1:196992/1‑228 (MQ=255) gCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGGTTAGG‑TTATCGCCGTTGGTCATATTGCAGTTCCGGCTGata > 1:542972/1‑228 (MQ=255) tttttttttCCGGTTTCCCGCCATTGGCAATTATTTTGGCTTTCTTCGCTTTGACCAGGTCCGCCATTTTGGGTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATAtttt < 2:205608/225‑1 (MQ=255) cttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGCAGTTAAGCACGCAATCGTTCACCGTCAGGTTGTGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTAccg > 1:244198/1‑226 (MQ=255) gcgcCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑GTATCGCCGTTGGTCATATTGAAGTTCAGGCTGATATTTTTAACCGCAGCTTTcggg > 1:278496/1‑226 (MQ=255) tgttttGTCTTTCTTCGTTTTTACATGGTCCGACATTTGGGCTGGCCCGGGCGGCGCGGGGTGCAGATGTTTACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGGAGCGTTTTCCGGTAGTTAAGCACGTTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAAc < 2:222731/226‑1 (MQ=255) ttGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTTAAGTTCAGGCTGATATTTTTACCCGCACCTTTTGCGCTATCGAGGCGACCgcc > 1:222731/1‑225 (MQ=255) tGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGCAGTTCCGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGccc > 1:29838/1‑227 (MQ=255) tACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGGTGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGGCAGGTGGGGG‑TTATCGCCGTTCCTCAAATTTAAGTTCAGGCTGATATTTTTACCCGCGCCTTTCGCGCTATCGGGGGGACCGGCCATAAAGTGGacagcca > 2:438159/1‑221 (MQ=255) gCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGAAATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGCACAGCATTTcgcccgac > 1:588582/1‑228 (MQ=255) ccATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGAGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGTACGGCTCTAATGGCGAAAAGCATTTCGACCGCCa > 1:102346/1‑228 (MQ=255) taTTTTGGCTTGTCCGGTCCGCACGGCGTGCAGGTCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACAt < 1:41004/227‑1 (MQ=255) ctttgcgggTCAGCACTGCGTTCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGaa < 1:618634/221‑1 (MQ=255) tCCGGTCAGCACGGCGTGCAGCTCTTCAAGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGGTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCATACAGCATTTCGACCACCATCCAGCGAAAgg > 1:160781/1‑227 (MQ=255) tCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGGAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTCAAGCAc > 2:268981/1‑87 (MQ=255) ccGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTCAAGCACg < 1:268981/87‑1 (MQ=255) tCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACACCATTTCGACCGCCATCCCGCGAATGGTGGCCg > 1:482360/1‑228 (MQ=255) tcgcccGGCGTGCAGGTTTTCACGGGTTATGTAAAAAGGGGCGTCGGCTTGGGGTTGCAGGGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCgg < 2:379123/223‑1 (MQ=255) cGTGCAGATCTTCCAGGCTGATGTAGAAAGGGGCGTCGGCTTGCGGTTGCAGCTTTTTCCGGTAGTTAAGCCCGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCgg < 1:545358/228‑1 (MQ=255) atcgtccgtgCTGGTGGAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGcc < 1:210292/219‑1 (MQ=255) tggttGATGTAGAAAGGGGCGTCGGTTTGGGGTTGGAGCGTTTTCCGGTAGTTAAGCACGTTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTg < 2:542972/224‑1 (MQ=255) gggCTGATGTAGAAGGGGGGGTCGGTTTGCGGTTGGAGCGTTTTCCGGTAGTTAAGCACGCTATCGTGCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTg < 2:197148/227‑1 (MQ=255) cTGATGGAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCCTAAAGTCGAACAGCATTTCCCCCGACATCCCGCGAATGGGGTCCGGGCAAACCGGGGAGCCGTGGCGGaaa > 2:210292/1‑227 (MQ=255) aTGTAGGAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGGTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTGGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTTGCCCCACATCCCCGGAATGGTGTCCGGGGCACCGTGGGGGCGCGGGCGGAACTTa > 2:542358/1‑228 (MQ=255) aTGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAAc < 1:367497/205‑1 (MQ=255) aTGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGGGTCCGGGGAACCGTGGGTGCCTTGGCTGAACTTa > 1:390211/1‑228 (MQ=255) ggggtgtgggCTTGGGGTTGCAGCGTTTTCCGGTCTTTAAGCCCGCTATCGTTTAGCGTCAGGTTGAGG‑TTATCGCCTTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCt < 2:353044/220‑1 (MQ=255) agGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGGGTCCGCGGAACCGGTGTTGCGTTGGCTGAACTTCTCCACCCCtc > 1:467786/1‑227 (MQ=255) agGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCACGCGAATGGTGTCCGGGGAACCGGTGGGGCCGTGGCTGACCTTATGCACCCCtt > 1:631695/1‑228 (MQ=255) gCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGGGTCCGGTGAACCGAGGTCGCCGTGGCTGAACTTATGCACCCCTTc > 1:682187/1‑227 (MQ=255) cGTCAGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGAACCCCtcagc > 1:561407/1‑224 (MQ=255) tCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGCGGTGCCGTGGCTGAACTTATTCACCCCTCcgcg > 1:168298/1‑227 (MQ=255) tCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGGGTCCGGGGAACCGGTGGTGCCGTGGCGGAAATTATGCACCCCTTggcg > 1:155970/1‑227 (MQ=255) gCAGCGTTTTCCGGTAGTTAAGCACGCTAGCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCgcgc < 1:35822/228‑1 (MQ=255) gtttttCCGGTTTTTCAGCCGGTTGTCGTTACGCGTCAGGTTGAGG‑TTATCGCTGTTGCTCATATGGAAGCTCGGGGTCATATTTTTCCCCGGAGCTTTCGCGGTAACGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCGCGCCGGt < 2:168298/226‑1 (MQ=255) ttttCCGGTAGTCAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTc > 2:205504/1‑98 (MQ=255) tttCCGGTAGTCAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTcg < 1:205504/98‑1 (MQ=255) ttCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGACCCCCTTCCCGCAGCTCTTTCGCGCCGGGCAg > 1:166089/1‑227 (MQ=255) ttCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCCCGAATGGTGTCCGGGGAACCGGTGGGGCCGTGGCTGACCTTCTGACCCCCTTCGCGCGGCCCTTCCGCCCCGGCCAgg > 2:35822/1‑228 (MQ=255) ttCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGAATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTGGCGCCGGGCAg > 1:681951/1‑227 (MQ=255) ccGGTTGTTAAGCACGCTATCGGTGAGCGTTAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCGCGCCGGTCAGGt < 1:205515/227‑1 (MQ=255) ccGGTAGTTAAGCCGGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTAATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTGCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCGCGCCGGTCAGGt < 1:438159/227‑1 (MQ=255) | CAAAAGCGAGTGACATTAATTTGGGGTTACGATATTCACCCACAAATCGAAATTATCCAGACAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCAGGTTGAGG‑TTATCGCCGTTGCTCATATTGAAGTTCAGGCTGATATTTTTACCCGCAGCTTTCGCGCTATCGAGGCGAACGGCCATAAAGTCGAACAGCATTTCGACCGACATCCCGCGAATGGTGTCCGGGGAACCGGTGGTGCCGTGGCTGAACTTATGCACCCCTTCGCGCAGCTCTTTCGCGCCGGTCAGGT > NC_000913/4304597‑4305039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |