| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,058,486 | T→C | 15.5% | S135P (TCG→CCG) | torC → | trimethylamine N‑oxide (TMAO) reductase I, cytochrome c‑type subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,058,486 | 0 | T | C | 15.5% | 104.1 / 3.0 | 54 | S135P (TCG→CCG) | torC | trimethylamine N‑oxide (TMAO) reductase I, cytochrome c‑type subunit |
| Reads supporting (aligned to +/- strand): ref base T (30/11); new base C (3/6); total (33/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCT > NC_000913/1058263‑1058700 | atatAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCTGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAAAAAAAAACTCgg > 2:657249/1‑227 (MQ=255)atatAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCCCGGAACTTGCCGACCGTGAATGGGCGCGAATGAAAGAAAAAAACTCgg > 1:449064/1‑227 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGCTATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAATCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAAAAACTCGGAAAACTCCCg > 2:515503/1‑228 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAATCGAGCGATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCCGGGGGGCACGGGCGGGAATGAAAGAAAAAAAATCGCCAACccgccg > 2:641149/1‑228 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGGGAATGGCGGCGAATGAAAGAAAACAACTCGCCAAccgcccg > 1:133233/1‑223 (MQ=255) tCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGCGCGTGAATGGGCGCGAATGAAAAAAAAAAACCCGGAAACCTGCCgg > 2:282129/1‑227 (MQ=255) cGGTGCATTGCCAGACCGCCGCCGGCGTGCGAGCTGAAGGCCATGACTGTCATCTCCCGCAGGATATCCCAGGCATGGTGAAGCGAAAACTGGAAGCGAGCAATGATATCTACCAGTCCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCAAATGAAAGAAAACAACTCGGCAACCTGCCGCt < 1:190932/228‑1 (MQ=255) tCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATa > 1:497711/1‑228 (MQ=255) ccgaccGCCTCCGGCGTGCGAGCTGAATGCCATGCCTGGCATACCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACCCCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACCCGGCAACCTGCCGCTCCTGCCAt < 1:488565/220‑1 (MQ=255) gAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCGTAACTa > 1:208547/1‑228 (MQ=255) cGCCTCCGGCGGGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTAcg < 1:87488/227‑1 (MQ=255) cGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGCCTCGAATGAAAGAAAACAACCCGGCAACCCGCCGGCCCTGCCCTAACTACGAAGCAAAGGAACa > 2:119057/1‑227 (MQ=255) caggcgtGTCATAACCCGCCGGTTATTCCAGGCATGGGGAAGCAAAACGTGGAAGCGAGCAGTGATATCTGCCAGACCTTTATTGGCCACTCCAGTGATGCACCTGAAAAATTCGAAGCCAAGC‑GCCCGGACCTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACCCGGCAACCTGCCTCTCCTGCCATAACTACGATGCGATGGATCATGCGAAgcagca < 1:515503/221‑1 (MQ=255) tCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGTTGCGATGGATCATGCGAAGCAGCATCCTGAagc > 1:561719/1‑228 (MQ=255) cgccgGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGGGAAGCAGCATCCTGAAGCAGCA‑CGTc > 1:558378/1‑228 (MQ=255) cgccgGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAACCAGCATCCTGAAGCAGCC‑CGTc > 1:205604/1‑228 (MQ=255) gCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGAAGGACCATTCGAAGCACCATCCTAAAGCAGCA‑CGTCAGATaaaagaggaag > 2:635779/1‑220 (MQ=255) ggTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCGGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGGTCATGCGAAGCAGCATCCTGAAGCAGAC‑CGTCAGATGAAGGTGGCAGCGa > 1:41716/1‑227 (MQ=255) gTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGTGCGCGAATGCAAGAAAACAACCCGGCAACCGGCCGCTCCTGCCATAACTACGATGCCATGGATCATGCAAAGCAGCACCCT‑TCCCAACACCGCCAGATGAAGGGGGCGGCGaaa > 2:59041/1‑228 (MQ=255) gcgcAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGCTa > 1:413620/1‑227 (MQ=255) cgcAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGAACATGCGAAGCAGCATCCTGAACAACCA‑CCCCAGAGAAAGGTGGCAGCGAAAGATaat > 2:337363/1‑228 (MQ=255) aCTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGCCAGATGAAGGTGGCAGCGAAAGATaatcaatc > 1:24285/1‑228 (MQ=255) aCTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGACCATGCGAAGCAGCAACCTGAAGCACCA‑CGCCAACGGAAGGGGGACGCGAAAAAAaataaaac > 2:207114/1‑226 (MQ=255) atcAATGATATCTACCAGACCTTTATTGCACACTCCATTGACACACCTGAAAAATTCGAAGCCAACC‑GCGCGGAACTTGCCGAGCGTGAAGGGGCGCGAATGAAAGAAACCAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGAc < 1:119057/226‑1 (MQ=255) aGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATCCGAAGCAGCATCCTGAAGCAGCA‑CGGCAGATAAAGGTGGCACCGAAGAAAAACCAATCCTgaacagcc > 1:274268/1‑221 (MQ=255) aaacgcacaaGACCTTTAATGCTCACTCAATTGATACCACGGAAAAATGCAAAGCAAAAC‑GCGGGGAACTGGCCGAGCGTGAAGGGGCGCGAATGAAAGAAAACAACACGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATa < 1:341194/219‑1 (MQ=255) cagccttttATTGCTCACTCCATTGATACACCTAAAAAATCCGAACCCAACC‑CGGCCGAACTTGCCGGGCGGGAAGGGGCGCGAATGAAAGAAAACAACCCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTa < 1:237149/220‑1 (MQ=255) gACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCGGCGAAAGATATTCAAACTTGCACCGACTGTCATACAGGAAtgg > 1:257071/1‑225 (MQ=255) gACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGCCAGCTGAAGGGGGCAGCGAAAGATAATCAATCATGCATGCACTTTCAAAAAGGAAATGc > 2:672853/1‑228 (MQ=255) aCCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAACGAAAACAACTCGGCAACCTGCCGCTCCTGCCCTAACTACGATGCGATGGATCATGCGACGCAGCATCCTGAAACAGCC‑CGTCCGATGAAGGTGTCCGCGCAAGATAATCAATCCCGCCTCGCCCGTCATAAAGGAATTGcc > 2:341194/1‑228 (MQ=255) aCCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGc > 2:50030/1‑101 (MQ=255) ccTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCa < 1:50030/101‑1 (MQ=255) tttATTGCTCAATCCATGAATACCCCAAAAAAATTAGAAGCCAAAC‑CCGCGGACTTTGCCGGGCGTGAAGGGGAGCAAAGGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCccac < 1:635779/228‑1 (MQ=255) aTTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGAATTGCCCACCAg > 1:180386/1‑228 (MQ=255) cccccTCCATTGATACACCAGAAAAATTCAAAGCCAAAC‑GCGCGGAACTGCCGGGGGGTGATGGGGGGAAAAAGAAAGAAAACACCCCGGCACCCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTAc < 2:497711/224‑1 (MQ=255) caacacATTGAAACACCGAAAAAATTCGAAGCCAACC‑GCGCGGAACTGGCCGAGCGGGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTAc < 1:657249/221‑1 (MQ=255) gacacacgaaaaaaaTTGAAGCCCAACAGCGCGGAACTGGCCGAGCTTGAAGGGGCTAGAAGGAAAGAAAACAACGCGGCAACCGGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGt < 2:468716/219‑1 (MQ=255) cacCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGc > 1:457288/1‑227 (MQ=255) cacCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGCCATCAAGGAATTGCCCACCGGTAACCGGatttaagaacc > 1:436147/1‑218 (MQ=255) ccTGAACAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGTTAATCACTCCTGCATCGCCTGTCGTAAAGGTATGGCCCACCAGTTCCCGGCTAGgaggagacga > 1:306624/1‑224 (MQ=255) ccTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAACGGGATTGCCCACCCGTTACCGGCTATGAg > 1:468716/1‑221 (MQ=255) ccTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGAATTGCCCACCAGTTACCGGCTATGAGTAGCGGc > 1:481848/1‑228 (MQ=255) aaCTTGCCGGCGGTGAATGGGCGAGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTgcg < 1:534916/226‑1 (MQ=255) ctGCCGGGCGGAAAGGGGCGGAAATGAAAGAAACAAGCTCGCACACCTGCCGCCCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCa < 1:672853/227‑1 (MQ=255) gggAATGGGCACGAATGAAAAAAAACACATCGGCAACCTGCCGCCACTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAAt < 1:282129/225‑1 (MQ=255) aaTGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGc > 1:176083/1‑157 (MQ=255) cgcgAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtgg > 1:471753/1‑226 (MQ=255) cgcgAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGGCATAAAGGTATTGCCAACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGTTGCGCGCCAGTGCTAATGACCgtgg > 1:658016/1‑226 (MQ=255) gtaaaggaaagaaaACAACCCGGCACCCTGCCGCCGCTGCCATAACTCCGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCTAAAGATAATCAATCCTTCACCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtggtg < 1:641149/221‑1 (MQ=255) gggAAGGAAAAAAAACGACGGGTCACCCGCCCGCCCCTGCCATAACTACGAGGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtggtg < 2:273534/225‑1 (MQ=255) aaTAAAAGAAAACAACGCGGCACTCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAAGCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGaca < 1:259712/227‑1 (MQ=255) tGAAAAAAAACAACTCGGCAACCTGCAGCTCCTGACATAACTACGATGCGATGGATCAGGCGAAGCAGCAGCGTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACg < 1:337363/227‑1 (MQ=255) ataaaaaaaaCAACTCGGCACCCTGCCCCCCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACg < 1:207114/225‑1 (MQ=255) ccaagaaaACACCCCGGCCACCGCCCCGCCCTGCCATAACTACGATGCGATGGAACATGCGAAGCAGCATCCTGAAGCAGCC‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCTGGTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCt < 2:608662/226‑1 (MQ=255) | ATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCT > NC_000913/1058263‑1058700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |