New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	20 (0.270)	53 (0.790)	41/378	NT	79.4%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209602	9 (0.130)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

CATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATT  >  NC_000913/1209379‑1209839                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAACTCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCTGGGTATTCTTCAGATGAAAAAGCGGCACCATAGCATTTCAGTCAGCCTGATGGCGCAGTGGCTAAGGGCCACGGAACCGGGACCACAACAGGAAAAGAAAGAccttcccccaaccca                                                                                                                                                                                                                                <  2:951716‑M2/239‑16 (MQ=255)   tACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑CTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAACGGACCCATTGCATTTAATCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGAAACCGGGACACCAACAGGAAGTGCAGCGccttccccccaaccaa                                                                                                                                                                                                                               <  2:233693‑M2/238‑17 (MQ=255)      cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtt                                                                                                                                                                                                                           <  1:758879‑M2/239‑21 (MQ=255)      cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGAGGCTGAAGGCACCGGAACCGGGACACCAAAAGGTAATGCAGAGccttctcccaaaccaaggtt                                                                                                                                                                                                                           <  1:475423‑M2/239‑21 (MQ=255)             tccctaaaaTAGAGCCACCTGTATCAACCCCCCGCCCGTCATCCC‑AGCCACGAATAAACCCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGCGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                                    >  2:412361‑M2/5‑212 (MQ=255)             tACTTAAAATAGAGCGCCCTGTACCAACCCCCCCCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTAATTGGCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                                    >  2:758879‑M2/1‑212 (MQ=255)                ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcc                                                                                                                                                                                                                 <  1:759706‑M2/239‑31 (MQ=255)                ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGccttctcccaaaccaagggtttcgagagcc                                                                                                                                                                                                                 <  1:412361‑M2/239‑31 (MQ=255)                   aaatgcacagtcctgtataaaaccCCCGACCTTCATACC‑AGGCCAGAATAAACTCCCCCCGTAAAGCAGGCAATTTATGTGTCGGGATAAGCCGTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAATGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctgctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                               >  2:463312‑M2/12‑207 (MQ=255)                       agagCGACCGGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                          >  1:356447‑M2/1‑202 (MQ=255)                         agCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCACCCAGCCTGGTGGCGGGGTGGCTGAAGGCACCGGAACCGGGACACCAACCGGTAATACACAGccttatcccaaaccaaaactttagagagccgtttgcaaa                                                                                                                                                                                                        <  2:342546‑M2/239‑40 (MQ=255)                            gccccttatcaatCCCCC‑CCCGTGCTCCCCAGCCCCGAATAAACTCACCTCGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCAGTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                                                                                                                      >  2:587283‑M2/7‑197 (MQ=255)                                            ccgcccgTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGTCGGATTGGCTGAAGGCCACGGAACCGGGAAACCACCAGGTAATGCAGAGccttctcccaaaccaaagtttcagaggaccgttagcacaggaccaaccgatttgaaat                                                                                                                                                                                     <  2:512589‑M2/239‑59 (MQ=255)                                            ccgcccgTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                                                                                                                                                                                      <  1:780465‑M2/238‑58 (MQ=255)                                               cccgTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                                                                                                   >  1:214282/1‑238 (MQ=255)                                                   tCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcggtttgcacagtgccatccgatttgatatcgccaaa                                                                                                                                                                              <  1:834853‑M2/239‑66 (MQ=255)                                                                cGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttccagagccgtttgcacagtgccacccagtttgaaaacgcccaacagattcttggg                                                                                                                                                                  <  2:24611‑M2/239‑78 (MQ=255)                                                                           accacGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgcgagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                                                                                                                       <  1:90297‑M2/239‑89 (MQ=255)                                                                           accacGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                                                                                                                       <  1:388937‑M2/239‑89 (MQ=255)                                                                                 tAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTAATTg                                                                                                                                                   >  1:138080/1‑237 (MQ=255)                                                                                         gCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACACGGTAATGCACAGccttcccccaaaccaaggcttgcgagagccctttgcaacgagccatcccattcgaaatcgccaaacggatttttgcgccttacaagcaccgcgcaaagagcg                                                                                                                                         <  2:117522‑M2/239‑103 (MQ=255)                                                                                         gCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgttaacgccaaacggattcttgcggcttaaaagcagagggcgaaagggg                                                                                                                                         <  2:189480‑M2/239‑103 (MQ=255)                                                                                          gaatTTATTTGGCGG‑ATAAGCCTTGGCCAGTTCCGGGTATTCGTCAGCAAAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcg                                                                                                                                         >  2:780465‑M2/2‑136 (MQ=255)                                                                                             tttatttGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagccgcgcgcgaagtgcggtaa                                                                                                                                     <  1:575830‑M2/239‑107 (MQ=255)                                                                                               tatttGTCGG‑ATAAGCCTTTGCCAGGTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                                                                                                   <  1:951716/239‑1 (MQ=255)                                                                                                 tttGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa                                                                                                                                 >  1:189480‑M2/1‑129 (MQ=255)                                                                                                    gTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaacaa                                                                                                                              <  1:995530/239‑1 (MQ=255)                                                                                                      ggg‑aAAAGCCTTGGCCAGTTCCGGGTTTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggt                                                                                                                            >  2:575830‑M2/2‑124 (MQ=255)                                                                                                                 ttaGCCAGTTCCGGGTATGCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccc                                                                                                                  >  1:272868‑M2/1‑114 (MQ=255)                                                                                                                  ttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                                                                                                                 >  1:910989‑M2/1‑113 (MQ=255)                                                                                                                         ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgcgagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcgccttaacagcagcgcgcgaagtgcgggaagtaactgggcgtgcccccccctcccca                                                                                                          <  2:910989‑M2/239‑134 (MQ=255)                                                                                                                           ccGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccagg                                                                                                        >  1:175238‑M2/1‑104 (MQ=255)                                                                                                                                tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                   >  1:631250‑M2/1‑99 (MQ=255)                                                                                                                                tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcagatttgatatcgccaaacggattcttgc                                                                                                                                                                   <  2:631250‑M2/175‑77 (MQ=255)                                                                                                                                  ttcttcAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcac                                                                                                 >  1:117522‑M2/1‑97 (MQ=255)                                                                                                                                      gcagcagaAAAAGCGGGACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACATGTAATGCAGGGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga                                                                                             >  1:342546‑M2/2‑93 (MQ=255)                                                                                                                                       aagcagAAAAAGCGGAACAATTGCATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCGCCCAAACCCACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCt                                                                                            <  2:258651/238‑1 (MQ=255)                                                                                                                                        agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATAAACAAATGACCCGAACACAGATCTACACAGTAATGCCCTg                                                                                           >  1:334781/1‑239 (MQ=255)                                                                                                                                          cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgcgagccgtttgcacagtgccatccggtttgatatcgccaaacggattcttgcggcttaaacgccgcgcgcgaagggcggtaagaaactggtcgtgccgccccttccccaggctggccccgggtgc                                                                                          <  2:762949‑M2/238‑150 (MQ=255)                                                                                                                                                           ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                   >  1:939458‑M2/1‑72 (MQ=255)                                                                                                                                                           ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                   <  2:939458‑M2/148‑77 (MQ=255)                                                                                                                                                                   cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGCAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgggttcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcct                                                                   <  1:532163‑M2/236‑173 (MQ=255)                                                                                                                                                                      ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                                                                                                                     >  2:165000‑M2/1‑61 (MQ=255)                                                                                                                                                                      ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                                                                                                                     <  1:165000‑M2/167‑107 (MQ=255)                                                                                                                                                                       cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaa                                                            >  1:658845‑M2/1‑60 (MQ=255)                                                                                                                                                                        tacctgTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                   <  1:395499‑M2/133‑77 (MQ=255)                                                                                                                                                                        tacctgTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                   >  2:395499‑M2/3‑59 (MQ=255)                                                                                                                                                                               tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtca                                                     >  1:138803‑M2/1‑52 (MQ=255)                                                                                                                                                                                   ggAGTGGCTTCAGGCCCCCGAACCGGGGACCCAAAAGGGAATGCGGACccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagt                                                 >  2:475423‑M2/1‑48 (MQ=255)                                                                                                                                                                                        ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtca                                            >  1:24611‑M2/1‑43 (MQ=255)                                                                                                                                                                                                   aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacccccctgcaaagttccccctccacaatgcacaagaagtcatccacacgcacg                                <  2:854013‑M2/239‑208 (MQ=255)                                                                                                                                                                                                   aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcg                                <  1:583788‑M2/239‑208 (MQ=255)                                                                                                                                                                                                    cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagaagtcatcatccagatcgg                               <  1:718750‑M2/239‑209 (MQ=255)                                                                                                                                                                                                    cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                                                                                                                                                                                      >  1:801922‑M2/1‑31 (MQ=255)                                                                                                                                                                                                    cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                                                                                                                                                                                      <  2:801922‑M2/88‑58 (MQ=255)                                                                                                                                                                                                      gACCCGGGACCCCACCAGGTAATGACGGTccttcgcccaaaccaaggttttcgagggccgtttgcacagtgccatccgatttgatagcgccaaacggattcttgcggcttaacagcagcgtgcgaagtgcggtaagtacctggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtg                             >  2:759706‑M2/1‑29 (MQ=255)                                                                                                                                                                                                            ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggccccggattcctccaccccgctgcaaagttccccctgcaacatgtccaagtagtcatcatccagatcgggggccggc                       <  2:165357‑M2/239‑217 (MQ=255)                                                                                                                                                                                                                acCAACAGGTAATGCAGACccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgataccgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgccgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgc                   >  1:512589‑M2/1‑19 (MQ=255)                                                                                                                                                                                                                   aaCAGGTAATGCAAAGCCTTCCCCCAAACCAACGTTTTAGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGaaaaaa                <  2:375073/239‑1 (MQ=255)                                                                                                                                                                                                                         tAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtct             >  1:941038‑M2/1‑10 (MQ=255)                                                                                                                                                                                                                          aaTGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggcttcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggacccggatgcctccaccacgctgcaacgttcctcctgcaacctgcccaagtagtccccatcccgatcggtggcagcggtgccggcctgggg         <  2:369836‑M2/239‑231 (MQ=255)                                                                                                                                                                                                                            tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggccccggatgcctccacaccgctgcaacgttcctccgccaccagttcaaagaagccaccccccacatcgggggacggcgtgccggctcgggggg       <  2:780760‑M2/239‑233 (MQ=255)                                                                                                                                                                                                                            tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggct                                                                                                      <  1:95441‑M2/144‑138 (MQ=255)                                                                                                                                                                                                                            tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggct                                                                                                      >  2:95441‑M2/1‑7 (MQ=255)                                                                                                                                                                                                                            tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAg        >  1:375073/1‑238 (MQ=255)                                                                                                                                                                                                                            tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAGGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAgg       <  1:233693/239‑1 (MQ=255)                                                                                                                                                                                                                                 agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttacc   <  1:584296‑M2/238‑237 (MQ=255)                                                                                                                                                                                                                                  gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                                  >  1:997416‑M2/1‑1 (MQ=255)                                                                                                                                                                                                                                  gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                                  <  2:997416‑M2/158‑158 (MQ=255)                                                                                                                                                                                                                                  gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGATTGAAAAAACGCCTCAGGACAtt  >  1:369649/1‑238 (MQ=255)                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              CATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCC‑AGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGG‑ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATT  >  NC_000913/1209379‑1209839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.