Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2469267	2469547	281	15 [13]	[10] 14	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

TATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTG  >  NC_000913/2469359‑2469772                                                                                                                                                                                              |                                                                                                                                                                                                                                 tataCATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATAGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGAGTTCTTCATCAACACTGTCAATGTTTGCATCTTTCTATCAAGAGTAAATAGTTATAATTttcctt                                                                                                                                                                                   >  1:919878/1‑237 (MQ=255)                             tttctaaaTATTTGGATGGTTGGGTGTTATGTTTTTTTCTAAAAAGTATATATAATTATTCCTTATATGCGATATTTTCTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCaaa                                                                                                                                                     <  2:919878/233‑1 (MQ=255)                                                                                  atttattCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGc                                                                                                >  1:352274/1‑239 (MQ=255)                                                                                                                                            tatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTa                                                                                                    <  1:799935/177‑1 (MQ=255)                                                                                                                                            tatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTa                                                                                                    >  2:799935/1‑177 (MQ=255)                                                                                                                                                           ttttAGCTTTTCTTATGGGTTTTTCATCAACACTGTCAATGTTGGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAc                                                                           <  2:341588/187‑1 (MQ=255)                                                                                                                                                                     tCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATa                                                                 >  1:341588/1‑187 (MQ=255)                                                                                                                                                                            tgtTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCaa                                                                                                                                                                                                           <  1:273375/42‑1 (MQ=255)                                                                                                                                                                            tgtTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCaa                                                                                                                                                                                                           >  2:273375/1‑42 (MQ=255)                                                                                                                                                                                ttttatcaACACTTTTAATTTTTTCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCgtg  <  2:352274/235‑1 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACaa                                                                                                                                                >  1:156614/1‑83 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATCTTATATTTTTTTTGATAGaca                                 >  2:562080/1‑194 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGaca                                 <  1:562080/194‑1 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAACTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACaa                                                                                                                                                <  2:156614/83‑1 (MQ=255)                                                                                                                                                                                              |                                                                                                                                                                                                                                 TATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTG  >  NC_000913/2469359‑2469772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑