| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,132,787 | A→C | 100% | I204S (ATC→AGC) | wcaA ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,132,787 | 0 | A | C | 100.0% | 189.4 / ‑6.7 | 73 | I204S (ATC→AGC) | wcaA | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base C (34/35); minor base G (1/1); total (35/38) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTT‑GGGAATAGACTTCGCC > NC_000913/2132557‑2133016 | tttAGGCCCCCCGAATCCCAACAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTc < 2:160566/239‑1 (MQ=255) gcgCCGGAAGTTTACCGTTACGCTCGGAATGGAGCGTCAGCAAAGTGGGCACGGGCATCTGTTTAGTGCGGATCGGGTAGAGGGTAAACTGCTGGTATTTTTTGCTGGCGCTGTCGAATTTGTCGTGGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑TCTTTCCACGGt < 2:60173/237‑1 (MQ=255) ccttttGCCGTTACGCCCCGACAGCAGCGTCAGTAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCg < 2:365280/235‑1 (MQ=255) aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTAACCGGGATTGATATCCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTGGCCg > 1:953874/1‑238 (MQ=255) aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGGGATCTGCATTTCACCGTGATTGATATGCAGGCCCTGCGTCGCCCCTTCT‑ACTTTCCACGGttgcccg > 1:961518/1‑233 (MQ=255) aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGAACCCGGAGAATTTTTTCGGTGACGGGGTGATATGCATTTCACGGTGATTGCTAGTCAAGCCTGGCGTCACCTCTTCA‑ACTTTCCACGGTTGCCCGt > 2:67766/1‑239 (MQ=255) cGTTTGCCGTTACGCTCCGACAGCAGCGTTAGCAAAGTGCGCCAGGGCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑a < 1:841153/239‑1 (MQ=255) ttGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTc < 1:670643/239‑1 (MQ=255) ttGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGACATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCAGATATTTCTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAATTGGACGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTACCCGTGATTTGTATGCACGGTCTGCGACGCCCCTTCT‑CCTTTCCACGGTTCGCCGT‑ACTc > 2:596412/1‑239 (MQ=255) tGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGCAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTc > 1:739543/1‑238 (MQ=255) gTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTccacca < 1:97322/239‑1 (MQ=255) acggccagcggGGTTAGAAAAGTGCGCAAGGTCATACGTTTATTGGGGATCTGGTAGAGGGTAAACAGCTGATTTTTTTTGCTGGCGCGGTCTAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCg < 2:943241/234‑1 (MQ=255) cGACAGCAGCGTCAGCAAAGTGCGCCAGGACATACGTTTCTTGCGGAACTGGCAGAGCGTACACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCGTGCGGTAAAAGTGGCAGTACCCGGAGAATTTTTTCGGTGACAAGGCGATTTGCATCTAACCGTGATTGATATGCAGGCTCTCGCTCTCCTCTTCT‑ACTTTACACGGTTCGCCGA‑ACCCACCCACCATccccc > 2:494198/1‑236 (MQ=255) aCAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGCCGGGGTGATCTGCATTTAACCGGATTTGATATGCAGGCTTGGCTGCGCTCCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTccaccccccaccccggg > 2:561024/1‑230 (MQ=255) aCAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCCGGCTCTGCGTCGCCCCTTCT‑AATTTCCCCGGTTCCCCGA‑CCCCCCCCAACACCGGCAgg > 2:279479/1‑239 (MQ=255) aCAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGCAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCGGCGGCGCCTCTGCT‑ACTTTCCACGGTTGGCGGT‑ACCCCACACCCACCCCCAgg > 2:845881/1‑239 (MQ=255) cagcGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGa > 1:52202/1‑239 (MQ=255) agcGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGGAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGa < 1:279479/238‑1 (MQ=255) gTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATTTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCTCCGT‑ACTCACCCACCATCCGCAGGAGGATGTc > 1:589162/1‑239 (MQ=255) gTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTAACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCAAGGTTCGCCGT‑CCTCCACCACCAACCCCAGGAAGagtgc > 2:23617/1‑235 (MQ=255) ttatttctttATTTCGTATCTGGTAGACGTTAACCAGCTGATTGTTTTTGCTGGCGCGGTCGAATTGGTCTTTGTGCTTGCGGTAAATGGTGAAGTACCCGGAGAAGTGTTTCGGTGACGAGGTGATCTGCATGTCACCGTGATTGATATGCAGGCTCTGCGTCGGCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCTCTACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCttt < 2:512115/231‑1 (MQ=255) tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGt > 1:782203/1‑239 (MQ=255) acttttATTGCGGTTCTGGTAGGGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCCTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACGTTCCACGGTTCGCCGT‑ACTCCACCACCAGCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGtt < 1:946798/236‑1 (MQ=255) aCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCCTCCGCCGGAAGATGTCGTAATCCCGTGCCGCtttacgtt > 2:254341/1‑234 (MQ=255) aCGTTTAGTTCGGATCTGGTAGAGGGTAAACAGCTTATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTACGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGtt < 1:845881/239‑1 (MQ=255) gTTTAGTGCGGATCTGGTAGGGGGTAAACAGCTGATATTTTGTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGcc < 1:917518/227‑1 (MQ=255) tATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGAACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCCCTGCGTCGCCTCTTCT‑ACTTTCTACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAAATGTCGTAATCCTGTGCGCCTTTCAGTTAggca > 1:988632/1‑237 (MQ=255) aTTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGACTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGCATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGCATTGATATGCAGGCTCTGCTTCGCAGCTTCT‑ACTTTCCACGGTTCGCCGG‑ACTCCACCACCAACCCCAGGAAAAACACGTAATCATGTGCCGCTTCCAGTCAGGTa > 2:470115/1‑238 (MQ=255) gATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGACGTTGTCGAAATCCCGTGCCGCTTTCGGTTcctgactctcat > 2:917518/1‑228 (MQ=255) gATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaaca > 1:382949/1‑239 (MQ=255) ttgTAGGGGGTAAACAGTGTATATTTTTTGCGGGCGGGGTCGAATTTTTCTTTGGGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 2:607052/237‑1 (MQ=255) ggTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCCCCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 1:606883/231‑1 (MQ=255) ggTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCCCCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca > 2:606883/1‑231 (MQ=255) ggTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 1:427372/231‑1 (MQ=255) ggTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca > 2:427372/1‑231 (MQ=255) ggTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGGGCCGCTTTCAGTTCGGTATCGAACAAACCCCCTTTGa > 2:820979/1‑239 (MQ=255) gTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGtt > 1:1007134/1‑157 (MQ=255) gTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGtt < 2:1007134/157‑1 (MQ=255) aaCAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGACGATGTCGTAATCCTGGGCCGCTTTCAGTACAGAAACGAACAAACACACTTTGaaaa > 2:418791/1‑237 (MQ=255) aaCAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTTTGCCGCTTCCAGTTCGTTATCGAACAACCACTCTTTGAAAc > 1:308310/1‑238 (MQ=255) aCAGCTGATATTTTTTGCTGGCGCTGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGc < 1:561024/239‑1 (MQ=255) cTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGCACGTGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTAGCCTCTTCT‑CCTTTCCACGGTTCGCCGTCACT‑CACCACCATCCCCAGGAAGTGGTCGTAATCCTGTGCCCACTTCAGTTAGGTCACGAACAAAAACCCTTTAAAAGACCAt > 2:485378/1‑238 (MQ=255) tGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGTCTCTTCT‑ACTTTCCACGGTTCGCCGtc > 2:808171/1‑154 (MQ=255) tGATATTTTTTGCTGGCGCGGTCGAATTTGTCTGTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGTCTCTTCT‑ACTTTCCACGGTTCGCCGT‑a < 1:808171/155‑1 (MQ=255) ttttttttttGCTGGCCTGGTCGAATTTTGTTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTTCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 2:981494/235‑1 (MQ=255) atttgttttGCGTGCGCGTGCGAATTTGTCTTGGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATAGGCAGGGTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGccc < 1:311821/234‑1 (MQ=255) atatTTTTTCGTGGGGCGGTTGATTTTTTCTTGGTTTTTGGGGAAAAAGCTGAAGTTCCCGGAGTATTTTTTCGGTTGCGAGGTACTCTGCATATACCCGGTGTTCATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCATGGTTCGCCGT‑TCTCCACCACCATCCGCAGGTAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACCCTTTTAAACGCCATGccc < 2:238498/239‑1 (MQ=255) ttttGGTGGGGCGGTAGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTa < 2:69035/239‑1 (MQ=255) ttttGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCCCGGTTCGCCGT‑ACTCCACCACCATACGCAGGCAGCTGTCGTAATCCTGTGCCGCTTTCAGCTCGATATCGAACAAACACCCTTTGAAAAGCCATGccccgaga > 2:38621/1‑234 (MQ=255) tttGCTGGCGCGGTCGAAGTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGGACCCGGATAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTaa < 1:596412/239‑1 (MQ=255) ggTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGtt < 1:797498/238‑1 (MQ=255) tttGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGc < 1:820979/239‑1 (MQ=255) ttgttgCTTGCGTGAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGAGCTGCATTTCCCCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGc < 1:429194/235‑1 (MQ=255) tGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCtcttct > 2:650709/1‑95 (MQ=255) tGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCtcttct < 1:650709/95‑1 (MQ=255) tGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc > 2:427129/1‑200 (MQ=255) tGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 1:427129/200‑1 (MQ=255) tAAAAGGTGAAGTGCCCGGGGAATTTTGTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGGGTCGCCTCTTCT‑ACTTTCCACGGGTCGCCGT‑ACTCCACCACCATCCGCAGGTAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAg < 1:494198/239‑1 (MQ=255) aaaGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAgg < 1:638619/238‑1 (MQ=255) cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGT‑AAGACCTGGTTGCCAATGATATTGCGTTTGTCGAACAGGCGGCGGGactcag > 1:378710/1‑233 (MQ=255) ccGGAGAATTTTTTCGGTGGCGGGGTGTACTGCATTTCACCGTGATTTATTTGCAGGCTTTGGCTCCGCCCTTCT‑TCTTTCCCCGGTTCGCCGT‑ACTCCACCCCCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACgg < 2:1006042/239‑1 (MQ=255) ccGGAGAATTTTTTCGGTGCCGGGGTGTTCTGCCTCTCGCCGTGGTTGATACGCAGGTTCTGCGTTGCCTCTTCT‑ACTGTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTGCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACgg < 1:485378/239‑1 (MQ=255) ggggtaTTTTTGCGGGGACGGGTTGGTCGCCATTTACCCGTGATTGTATTGCAGGCTGCCCGTCGCCTCTTCG‑CCTTTCCACGGTTCGCCGT‑TCTCCACCCCCAGCCGCAGGAAGATTTCGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCg < 2:739543/234‑1 (MQ=255) ttCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATa < 1:499600/239‑1 (MQ=255) aTCTGCATTTCACCGTGATTGATATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCTCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGGTAAGGACCTGGTTGCCAATGATTTTCGGTTTGTAGAAAAGGCGGCGTGAATACGGCGCTTTGGGATACAGGGGccactgta > 2:331730/1‑232 (MQ=255) gCATTTCCCCTTGACTGGTAGTCAGGCTCTGCGTCCCCTCTTCT‑TCTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGGAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGt < 1:418791/239‑1 (MQ=255) ccctttCCCCGTGATTGATGTTCCGGATCTGCGTCGCC‑CTGCTCCCTGTCCACGAGTTGTCGT‑ATCCCACCCCCTTCCGCAGGAAGTTGCCGTAAGCCTTTGCCGCTTTCCGTTCGGTATCGAACAAACCCGCTTTGAAACGTCATGCCCG‑TGTAAAGACCTGTTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGTATGAGGCGATTTGGGAGACAGCGGCAAGCTTGCCGGt < 2:665380/236‑1 (MQ=255) ttCACCGTGATTGATATGCAGGCTCTGCGTAGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTATGCCGCTTTCAGTTCGGTATCGAACAAACCCTCTTTGCACCCCCATGCCCA‑GGAAACAACCTGGTTGCCAATGAAATTGCCTTTGTAGAACAGGCGGCGGGGATACGGGGATTTGGAGGAAAGAGGAAACGTTGCCGGTg‑ggg > 2:124027/1‑239 (MQ=255) tgattgatATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGACCAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTT‑GGGAATaa > 1:445351/1‑236 (MQ=255) tgattgatATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGGGGAGAAACGGGGATTTTGGATAAAACGGCAAAGTTGGCGGTG‑GGGAAAAGag > 2:26245/1‑238 (MQ=255) tgattgatATGCAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGCTTTGGGCTACAGCGGCAAGCTTGCCGGTTGGGGAATAg > 1:664189/1‑238 (MQ=255) tattgaatgtcAGGCTCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACGCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTT‑GGGAATAGACt < 1:147495/229‑1 (MQ=255) ttttGCAGGCTCTGCTTCGCCTTTTTT‑TCTTTCCCCGGTTCCCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTT‑GGGAATAGACTTCGcc < 2:445351/236‑1 (MQ=255) | TTTAGCGCCCCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCTGCGTCGCCTCTTCT‑ACTTTCCACGGTTCGCCGT‑ACTCCACCACCATCCGCAGGAAGATGTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCA‑GGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTT‑GGGAATAGACTTCGCC > NC_000913/2132557‑2133016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |