Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 3,699,266 | T→A | 7.1% | N351K (AAT→AAA) | bcsG → | DUF3260 family cellulose production inner membrane protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,699,266 | 0 | T | A | 7.1% | 226.2 / 2.4 | 76 | N351K (AAT→AAA) | bcsG | DUF3260 family cellulose production inner membrane protein |
Reads supporting (aligned to +/- strand): ref base T (18/49); new base A (5/2); total (25/51) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.68e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 |
CGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTG > NC_000913/3699032‑3699498 | cGCCACCTCCTACAGTGGCCCGGCGGCGATCCCTTTACTCGGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTAGCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGc < 1:945935/239‑1 (MQ=255) gCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGGGAATTGATGGGTCCAAAAAA‑tttacc > 1:242223/1‑234 (MQ=255) cccACCCCCTACAGTGGCCCGGGCGCGATCCGTTTTCTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGcc < 2:331574/238‑1 (MQ=255) ttcttaaGTGGCCGGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACGCTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTa < 1:697634/232‑1 (MQ=255) cctACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGCGGGTTTTTTT‑AAAAAAGTTTCAGAAAATGG‑GGAT‑CACAGAGCGAATTGATGGGCAAAAAAAA‑AC‑AGCCgggagta > 2:208560/1‑234 (MQ=255) tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTT‑AAAGAAGTTCTCGAAAAAGGCGGCA‑TGCCGAGCGAATTGATGGGTTAAACAAA‑TC‑TGCCGGGTTTTTTTCTgg > 1:717995/1‑239 (MQ=255) tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTTGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGGTCAAACAAA‑TC‑TGCCGGGTATTTTTCttg > 1:213272/1‑237 (MQ=255) tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTTATGGGTTAAACAAA‑TC‑TGCCGGGTTTTTTTCttg > 1:711755/1‑237 (MQ=255) ggCCGGGAGGCTATCCGTTTACTGCGCGCCAGCTGCGGTCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCt < 1:744901/236‑1 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCCATTCGGC‑GGGTTTTTG‑TAAGAAAGTCGCGCCAATGGCGGCAGTCCAGAGGGATTTGTGGGGTAAAACAAA‑‑C‑ACCCGGGTAATTTGCTgggg > 2:330672/1‑238 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTT‑TAAAAAATTTTCGGAAAAGAGGGCC‑TGCAAAGCGGATTTCTTGGTCAAAAAAA‑AC‑TGCCCGGTTTATTGTTgggg > 2:285679/1‑238 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTT‑AAAGAAATTCGCGAAAATGGCGGCA‑TGCAGGGCGGATTGATTGATCAAACAAA‑AA‑TGCCGGTTAATTTGCTtggg > 1:179793/1‑238 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTT‑AAAGAAAGTCGCGAAAAAGGCGGCA‑TGCAGCGCGACTTGATGGATACAACAAA‑TC‑TTCCCGTTAtttttttgg > 1:987914/1‑232 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTTGCGAAAATGGCGGCA‑TGCAGAGCGGATTGATGGATCAAACAAA‑TC‑TTCCGGTTATTTTGCTgg > 1:872879/1‑237 (MQ=255) gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGGTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGTAGAGCGCACTTGTGGGGCAAACAAATTT‑TGCCGGTATTTTTTCgggg > 1:56367/1‑239 (MQ=255) cggcggCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCttt < 1:363557/239‑1 (MQ=255) cggcggCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAA‑GGCCAGTTCGGCGGGTTTTTTA‑AAAAAATTTCG‑GGAAATGGAGGCA‑GTCCAAGCGCAGTGTGGGAGCAAACAAA‑TA‑CGCCCGTTATTTTgtggggggtt > 2:547004/1‑230 (MQ=255) tCCGTTTTCTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCg < 1:304226/239‑1 (MQ=255) ccGTTTACTGCGCGCCAGCTGGGGGCAGTCGTCGCCAACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGc < 2:711755/239‑1 (MQ=255) ccGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGc < 1:285679/239‑1 (MQ=255) tACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCCACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACGCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGtt < 1:489894/239‑1 (MQ=255) tACTGCGCGCCAGCTGCGGGCAGACTTCGCACAATAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGtt < 1:106154/239‑1 (MQ=255) cgcgcccCAGTTGCGGGCAGCCTTCGCACACTAATCTGATTCAACCGGCAAAAAACGACTGGTATCGTTTTGATAACCTTTCGAAACTGGGTTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTAt < 2:987914/238‑1 (MQ=255) cgcgcCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTT‑GAAGAAGTTTGCGAAAATGGCGGCA‑TGCAGAGGGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTTCTGGGCCTTGATGGTTCGCCGGTTTTTGa > 1:895739/1‑239 (MQ=255) gcgcCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑TAAGAAGTTCGCGAAAATTGCGGCA‑TGGACAGCGAACTGATGGATCAAACAAA‑CA‑CTCCGGGTTTTTTTCTGGGCTTTTATGGTTCGCCGGgtttttac > 2:155414/1‑234 (MQ=255) cTGCGGGCAGTTTTCGCACACTAATCTTTACCAACCGGCAAATAACGGCTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑AC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg < 2:179793/239‑1 (MQ=255) tGCGGGCATACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg < 1:386504/238‑1 (MQ=255) tGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGTACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg < 1:345803/238‑1 (MQ=255) gCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCt < 1:208560/239‑1 (MQ=255) cGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAGCTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTAt < 1:109797/215‑1 (MQ=255) ccTAAGCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCgctggct < 1:991490/238‑1 (MQ=255) acTAATCTGTATCAACCGGGAAATAACGGCTGCGATCTGTTTGATAACCTTTCGAAACTGGGCGTTACCCAGCACCTGATGAGGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCgctggct < 1:361898/239‑1 (MQ=255) tCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTGAAAAGAAG‑TCTCGAAAATGGCGGCC‑AGCACAGCGGATTGTTGGGTCAAAAAAA‑AC‑TGCCGAGTATTTTGTTGGGGTTTTGTGGTTTGCCGGTTTATGACGATAACCCTGTGGTTTACCcctggcgtggga > 2:838297/1‑233 (MQ=255) ggaTCAACCGGCAAATAACGACTGCTATTTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTa < 1:208260/237‑1 (MQ=255) aCCGGCAAATAACGGCTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGGTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGaaa < 1:77004/239‑1 (MQ=255) cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg > 1:15303/1‑201 (MQ=255) cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg < 2:15303/201‑1 (MQ=255) cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGCTTTTTT‑TAAGAAGTTCGCGCAAATGGCGGCC‑TTCAGAGCGAATTGATGGGTCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGGTTATGAAGCTACCGCTTTGCTTAACCCCTGGCTGGACGTTTCCGAAAAAGAt > 1:358810/1‑239 (MQ=255) taCGGCTGCTATCAGTTGGATAACCTTTCGAATCTGGGCTTTACCCAGCACCTGATGAGGGGACATAAC‑GGCAAGTTCGGC‑GGTTTTTTG‑AAAGTAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCTAAAAAGATaaaaa < 1:735294/238‑1 (MQ=255) cTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCg < 1:887345/237‑1 (MQ=255) ttttATTACCTTTCAAACCTGGGGTTTTCCCAGCCCCGGGTTGTGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGAT‑GTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACg < 2:242223/239‑1 (MQ=255) ttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACg < 1:288129/239‑1 (MQ=255) gATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGGAAATGGCGGCA‑TGCAGAGCGGATTGATGGATCAAACAAA‑AC‑TGCCGGGTATTTTTCTGGGCTTTGATGGGTTGCCGGGTTATTACGATACCCCTTTGCTTAAACGCTGGGCGGCGGTTTCCGAAAAATAAAAAAACAACCGTCATGCCCCg > 2:887345/1‑237 (MQ=255) aaaccttttCGAAATGGGGCTTTCCCCAGCCCTGGATGAGGGGAACAAAC‑GGCCAGGTGGGC‑GGTTTTTTG‑AAAGAAGTTCGCAAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTc < 2:56367/233‑1 (MQ=255) aCCTTTCTAAACTGGGCTTTACCCAGCACCTGATGGTGGGACCTAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTac < 1:420723/239‑1 (MQ=255) cTTTCGAACCTGGGCTTTCCCCAGCACTGGATGTTGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGAGAAAAGGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa < 2:872879/239‑1 (MQ=255) cTTTCGAACCTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGc < 1:579976/173‑1 (MQ=255) cTTGCGAAACTGGGCTTTACCCAGCCCCGTATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTCACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa < 1:838297/239‑1 (MQ=255) cTTGCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGGTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa < 1:230045/239‑1 (MQ=255) ttcgaactcgggCTTTACCCAGCACCTGAAGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaaca < 1:809787/230‑1 (MQ=255) tCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTTGCGCAAATGGCGGCC‑TGCCGAGCGGCTTGTTGGGTCAAAAACA‑TCTTGCGGGTAATTTTG‑TTGGCTTTGATAGTTCGCCGGTTTCTGCACATACCCCTGTGCTTAACCGCTGGGCGGCCGTTACCGAGAAAGAGAAAAAAAACCGGACGTCCACGTGCTacaaca > 2:230045/1‑238 (MQ=255) acggggCTTTACCCAGCCCCTGATTGTGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAATTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTc < 1:51114/236‑1 (MQ=255) cTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGcc < 1:881269/219‑1 (MQ=255) cTTTACCCAGCACCTGATGATGGG‑CAAAACGGGCCAGTTCGGG‑GTTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCT‑TGCAGGGCGAATTGATGGATCAAACATA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGGGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGc < 2:465098/239‑1 (MQ=255) tACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑TAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAAAACGCTTCCACTGCAt > 1:5807/1‑238 (MQ=255) cAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg < 1:243337/239‑1 (MQ=255) aaccccTGATGTTGGGCAATACC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAATTTCGCGAAAATGGCGGCA‑GGCAGGGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGc < 2:29863/235‑1 (MQ=255) cccggatgatGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGc < 1:164473/232‑1 (MQ=255) cgtgtgaggGGAAATAAC‑GGCCAGTTCGGG‑GTTTTTTTT‑AAAAAAGTTCGCGAAAATGGCGGGA‑TGCAGAGGGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCa < 2:895739/235‑1 (MQ=255) gatgatGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTCTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGGTCTACAACAAGCTTCCCCTGCATGACGGCAACCCtt > 1:790415/1‑239 (MQ=255) gatgGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTTATTGAGCAAACAAA‑TC‑TGCCGGTTATTTTTCTGGGCGTTTATGGGTCGCCGGTTTTTTACGAAACCCCTTTTCTTAACCCCTGGGTGGGCTGTTCCCAAAAAGAAAAAAAAAGCCCTAGGGCCCCGTTTTACAACACCCCCCCACCGCCTGAAGGCAACCATTaac > 2:966773/1‑237 (MQ=255) aCATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTa < 1:547021/185‑1 (MQ=255) ccAGGTCGGC‑GGTTTTTTA‑AAAGAATTGCGGAAAAATGGCGGCA‑GGCAGAACGAATTGATGGATCAAAAAAA‑TC‑TGCCAGTTATTTGCCTGGCTTTTGATGGTTCGCCGGTTTATGACGATAACGCTGTGCCTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTTCATGACGGCAACCATTATCCGGGGGTCAGCaaaa < 2:802419/239‑1 (MQ=255) tgTTTGGC‑GTTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGGTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACa < 2:213272/238‑1 (MQ=255) gcggg‑ggTTTTTGG‑AAAGACGTTCGCGAAAATGGCGGCA‑TTCAGAGCGATTTGATGGAACAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACa < 1:528303/235‑1 (MQ=255) c‑ggTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGGTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAATGCCCCGTTCTACAAAACGCTTCCACTGCATGAAGGCAACCATTATCCGGGGGGAAGCCAAACACCGGAtt > 1:214658/1‑239 (MQ=255) tttttgG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCC‑GGGGTCAGCAAAACAGCGGATTACa < 1:247427/238‑1 (MQ=255) cggcA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGAAGAAATTCTTtgctg > 1:850881/1‑239 (MQ=255) agagCGAATTGATGGATCAAAAAAA‑AT‑TGCCGGTTATTTTGCTGGGCCTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGGTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGGGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:534248/239‑1 (MQ=255) gagCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:966773/238‑1 (MQ=255) gagCGAATGGATGGAACAAAAAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTGGATGGTTGGCCGGTTTAGGACGATACCGCGGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:346214/238‑1 (MQ=255) agCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg > 1:814543/1‑164 (MQ=255) agCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg < 2:814543/164‑1 (MQ=255) gCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:330672/236‑1 (MQ=255) gCGAATTGAAGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGAGACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:319359/236‑1 (MQ=255) gCGAATGGAGGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGAGGGGTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGGTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc < 1:749225/236‑1 (MQ=255) aacaaa‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTg > 1:547896/1‑239 (MQ=255) | CGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAC‑GGCCAGTTCGGC‑GGTTTTTTG‑AAAGAAGTTCGCGAAAATGGCGGCA‑TGCAGAGCGAATTGATGGATCAAACAAA‑TC‑TGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTG > NC_000913/3699032‑3699498 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |