Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,699,266 T→A 7.1% N351K (AAT→AAA bcsG → DUF3260 family cellulose production inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,699,2660TA 7.1% 226.2 / 2.4 76N351K (AAT→AAAbcsGDUF3260 family cellulose production inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (18/49);  new base A (5/2);  total (25/51)
Fisher's exact test for biased strand distribution p-value = 2.68e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01

CGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTG  >  NC_000913/3699032‑3699498
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                         
cGCCACCTCCTACAGTGGCCCGGCGGCGATCCCTTTACTCGGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTAGCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGc                                                                                                                                                                                                                                      <  1:945935/239‑1 (MQ=255)
 gCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGGGAATTGATGGGTCCAAAAAAtttacc                                                                                                                                                                                                                                      >  1:242223/1‑234 (MQ=255)
 cccACCCCCTACAGTGGCCCGGGCGCGATCCGTTTTCTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGcc                                                                                                                                                                                                                                     <  2:331574/238‑1 (MQ=255)
       ttcttaaGTGGCCGGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACGCTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTa                                                                                                                                                                                                                                <  1:697634/232‑1 (MQ=255)
        cctACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGGTTTTTTTAAAAAAGTTTCAGAAAATGGGGATCACAGAGCGAATTGATGGGCAAAAAAAAACAGCCgggagta                                                                                                                                                                                                                              >  2:208560/1‑234 (MQ=255)
               tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTTAAAGAAGTTCTCGAAAAAGGCGGCATGCCGAGCGAATTGATGGGTTAAACAAATCTGCCGGGTTTTTTTCTgg                                                                                                                                                                                                                       >  1:717995/1‑239 (MQ=255)
               tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTTGCGAAAATGGCGGCATGCAGAGCGAATTGATGGGTCAAACAAATCTGCCGGGTATTTTTCttg                                                                                                                                                                                                                       >  1:213272/1‑237 (MQ=255)
               tGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTTATGGGTTAAACAAATCTGCCGGGTTTTTTTCttg                                                                                                                                                                                                                       >  1:711755/1‑237 (MQ=255)
                ggCCGGGAGGCTATCCGTTTACTGCGCGCCAGCTGCGGTCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCt                                                                                                                                                                                                                         <  1:744901/236‑1 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCCATTCGGCGGGTTTTTGTAAGAAAGTCGCGCCAATGGCGGCAGTCCAGAGGGATTTGTGGGGTAAAACAAACACCCGGGTAATTTGCTgggg                                                                                                                                                                                                                     >  2:330672/1‑238 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTTTAAAAAATTTTCGGAAAAGAGGGCCTGCAAAGCGGATTTCTTGGTCAAAAAAAACTGCCCGGTTTATTGTTgggg                                                                                                                                                                                                                     >  2:285679/1‑238 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTTAAAGAAATTCGCGAAAATGGCGGCATGCAGGGCGGATTGATTGATCAAACAAAAATGCCGGTTAATTTGCTtggg                                                                                                                                                                                                                     >  1:179793/1‑238 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTTAAAGAAAGTCGCGAAAAAGGCGGCATGCAGCGCGACTTGATGGATACAACAAATCTTCCCGTTAtttttttgg                                                                                                                                                                                                                       >  1:987914/1‑232 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTTGCGAAAATGGCGGCATGCAGAGCGGATTGATGGATCAAACAAATCTTCCGGTTATTTTGCTgg                                                                                                                                                                                                                       >  1:872879/1‑237 (MQ=255)
                 gCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGGTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGTAGAGCGCACTTGTGGGGCAAACAAATTTTGCCGGTATTTTTTCgggg                                                                                                                                                                                                                      >  1:56367/1‑239 (MQ=255)
                    cggcggCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCttt                                                                                                                                                                                                                  <  1:363557/239‑1 (MQ=255)
                    cggcggCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAAAGGCCAGTTCGGCGGGTTTTTTAAAAAAATTTCGGGAAATGGAGGCAGTCCAAGCGCAGTGTGGGAGCAAACAAATACGCCCGTTATTTTgtggggggtt                                                                                                                                                                                                                  >  2:547004/1‑230 (MQ=255)
                             tCCGTTTTCTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCg                                                                                                                                                                                                         <  1:304226/239‑1 (MQ=255)
                              ccGTTTACTGCGCGCCAGCTGGGGGCAGTCGTCGCCAACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGc                                                                                                                                                                                                        <  2:711755/239‑1 (MQ=255)
                              ccGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGc                                                                                                                                                                                                        <  1:285679/239‑1 (MQ=255)
                                   tACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCCACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACGCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGtt                                                                                                                                                                                                   <  1:489894/239‑1 (MQ=255)
                                   tACTGCGCGCCAGCTGCGGGCAGACTTCGCACAATAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGtt                                                                                                                                                                                                   <  1:106154/239‑1 (MQ=255)
                                      cgcgcccCAGTTGCGGGCAGCCTTCGCACACTAATCTGATTCAACCGGCAAAAAACGACTGGTATCGTTTTGATAACCTTTCGAAACTGGGTTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTAt                                                                                                                                                                                                <  2:987914/238‑1 (MQ=255)
                                        cgcgcCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTTGAAGAAGTTTGCGAAAATGGCGGCATGCAGAGGGAATTGATGGATCAAACAAATCTGCCGGTTATTTTTCTGGGCCTTGATGGTTCGCCGGTTTTTGa                                                                                                                                                                                              >  1:895739/1‑239 (MQ=255)
                                         gcgcCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGTAAGAAGTTCGCGAAAATTGCGGCATGGACAGCGAACTGATGGATCAAACAAACACTCCGGGTTTTTTTCTGGGCTTTTATGGTTCGCCGGgtttttac                                                                                                                                                                                             >  2:155414/1‑234 (MQ=255)
                                                cTGCGGGCAGTTTTCGCACACTAATCTTTACCAACCGGCAAATAACGGCTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAAACTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg                                                                                                                                                                                      <  2:179793/239‑1 (MQ=255)
                                                 tGCGGGCATACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg                                                                                                                                                                                      <  1:386504/238‑1 (MQ=255)
                                                 tGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGTACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg                                                                                                                                                                                      <  1:345803/238‑1 (MQ=255)
                                                  gCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCt                                                                                                                                                                                    <  1:208560/239‑1 (MQ=255)
                                                              cGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAGCTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTAt                                                                                                                                                                                                <  1:109797/215‑1 (MQ=255)
                                                                   ccTAAGCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCgctggct                                                                                                                                                                   <  1:991490/238‑1 (MQ=255)
                                                                   acTAATCTGTATCAACCGGGAAATAACGGCTGCGATCTGTTTGATAACCTTTCGAAACTGGGCGTTACCCAGCACCTGATGAGGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCgctggct                                                                                                                                                                   <  1:361898/239‑1 (MQ=255)
                                                                        tCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAAGAAGTCTCGAAAATGGCGGCCAGCACAGCGGATTGTTGGGTCAAAAAAAACTGCCGAGTATTTTGTTGGGGTTTTGTGGTTTGCCGGTTTATGACGATAACCCTGTGGTTTACCcctggcgtggga                                                                                                                                                              >  2:838297/1‑233 (MQ=255)
                                                                           ggaTCAACCGGCAAATAACGACTGCTATTTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTa                                                                                                                                                           <  1:208260/237‑1 (MQ=255)
                                                                                 aCCGGCAAATAACGGCTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGGTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGaaa                                                                                                                                                     <  1:77004/239‑1 (MQ=255)
                                                                                      cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg                                                                                                                                                                                      >  1:15303/1‑201 (MQ=255)
                                                                                      cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCg                                                                                                                                                                                      <  2:15303/201‑1 (MQ=255)
                                                                                      cAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGCTTTTTTTAAGAAGTTCGCGCAAATGGCGGCCTTCAGAGCGAATTGATGGGTCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGGTTATGAAGCTACCGCTTTGCTTAACCCCTGGCTGGACGTTTCCGAAAAAGAt                                                                                                                                                >  1:358810/1‑239 (MQ=255)
                                                                                           taCGGCTGCTATCAGTTGGATAACCTTTCGAATCTGGGCTTTACCCAGCACCTGATGAGGGGACATAACGGCAAGTTCGGCGGTTTTTTGAAAGTAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCTAAAAAGATaaaaa                                                                                                                                           <  1:735294/238‑1 (MQ=255)
                                                                                                   cTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCg                                                                                                                                     <  1:887345/237‑1 (MQ=255)
                                                                                                          ttttATTACCTTTCAAACCTGGGGTTTTCCCAGCCCCGGGTTGTGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACg                                                                                                                           <  2:242223/239‑1 (MQ=255)
                                                                                                           ttGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACg                                                                                                                           <  1:288129/239‑1 (MQ=255)
                                                                                                             gATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGGAAATGGCGGCATGCAGAGCGGATTGATGGATCAAACAAAACTGCCGGGTATTTTTCTGGGCTTTGATGGGTTGCCGGGTTATTACGATACCCCTTTGCTTAAACGCTGGGCGGCGGTTTCCGAAAAATAAAAAAACAACCGTCATGCCCCg                                                                                                                           >  2:887345/1‑237 (MQ=255)
                                                                                                              aaaccttttCGAAATGGGGCTTTCCCCAGCCCTGGATGAGGGGAACAAACGGCCAGGTGGGCGGTTTTTTGAAAGAAGTTCGCAAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTc                                                                                                                        <  2:56367/233‑1 (MQ=255)
                                                                                                                 aCCTTTCTAAACTGGGCTTTACCCAGCACCTGATGGTGGGACCTAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTac                                                                                                                     <  1:420723/239‑1 (MQ=255)
                                                                                                                   cTTTCGAACCTGGGCTTTCCCCAGCACTGGATGTTGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGAGAAAAGGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa                                                                                                                   <  2:872879/239‑1 (MQ=255)
                                                                                                                   cTTTCGAACCTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGc                                                                                                                                                                                     <  1:579976/173‑1 (MQ=255)
                                                                                                                   cTTGCGAAACTGGGCTTTACCCAGCCCCGTATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTCACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa                                                                                                                   <  1:838297/239‑1 (MQ=255)
                                                                                                                   cTTGCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGGTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaa                                                                                                                   <  1:230045/239‑1 (MQ=255)
                                                                                                                     ttcgaactcgggCTTTACCCAGCACCTGAAGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTacaaca                                                                                                                 <  1:809787/230‑1 (MQ=255)
                                                                                                                      tCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTTGCGCAAATGGCGGCCTGCCGAGCGGCTTGTTGGGTCAAAAACATCTTGCGGGTAATTTTGTTGGCTTTGATAGTTCGCCGGTTTCTGCACATACCCCTGTGCTTAACCGCTGGGCGGCCGTTACCGAGAAAGAGAAAAAAAACCGGACGTCCACGTGCTacaaca                                                                                                                 >  2:230045/1‑238 (MQ=255)
                                                                                                                           acggggCTTTACCCAGCCCCTGATTGTGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAATTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTc                                                                                                           <  1:51114/236‑1 (MQ=255)
                                                                                                                            cTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGcc                                                                                                                              <  1:881269/219‑1 (MQ=255)
                                                                                                                                 cTTTACCCAGCACCTGATGATGGGCAAAACGGGCCAGTTCGGGGTTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCTTGCAGGGCGAATTGATGGATCAAACATATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGGGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGc                                                                                                     <  2:465098/239‑1 (MQ=255)
                                                                                                                                    tACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGTAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAAAACGCTTCCACTGCAt                                                                                                   >  1:5807/1‑238 (MQ=255)
                                                                                                                                        cAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg                                                                                              <  1:243337/239‑1 (MQ=255)
                                                                                                                                         aaccccTGATGTTGGGCAATACCGGCCAGTTCGGCGGTTTTTTGAAAGAATTTCGCGAAAATGGCGGCAGGCAGGGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGc                                                                                             <  2:29863/235‑1 (MQ=255)
                                                                                                                                            cccggatgatGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGc                                                                                             <  1:164473/232‑1 (MQ=255)
                                                                                                                                              cgtgtgaggGGAAATAACGGCCAGTTCGGGGTTTTTTTTAAAAAAGTTCGCGAAAATGGCGGGATGCAGAGGGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCa                                                                                        <  2:895739/235‑1 (MQ=255)
                                                                                                                                                gatgatGGGACATAACGGCCAGTTCGGCGGTTTTCTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGGTCTACAACAAGCTTCCCCTGCATGACGGCAACCCtt                                                                                      >  1:790415/1‑239 (MQ=255)
                                                                                                                                                   gatgGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTTATTGAGCAAACAAATCTGCCGGTTATTTTTCTGGGCGTTTATGGGTCGCCGGTTTTTTACGAAACCCCTTTTCTTAACCCCTGGGTGGGCTGTTCCCAAAAAGAAAAAAAAAGCCCTAGGGCCCCGTTTTACAACACCCCCCCACCGCCTGAAGGCAACCATTaac                                                                                   >  2:966773/1‑237 (MQ=255)
                                                                                                                                                         aCATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTa                                                                                                                                   <  1:547021/185‑1 (MQ=255)
                                                                                                                                                                   ccAGGTCGGCGGTTTTTTAAAAGAATTGCGGAAAAATGGCGGCAGGCAGAACGAATTGATGGATCAAAAAAATCTGCCAGTTATTTGCCTGGCTTTTGATGGTTCGCCGGTTTATGACGATAACGCTGTGCCTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTTCATGACGGCAACCATTATCCGGGGGTCAGCaaaa                                                                    <  2:802419/239‑1 (MQ=255)
                                                                                                                                                                     tgTTTGGCGTTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGGTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACa                                                                  <  2:213272/238‑1 (MQ=255)
                                                                                                                                                                        gcgggggTTTTTGGAAAGACGTTCGCGAAAATGGCGGCATTCAGAGCGATTTGATGGAACAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACa                                                                  <  1:528303/235‑1 (MQ=255)
                                                                                                                                                                            cggTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGGTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAATGCCCCGTTCTACAAAACGCTTCCACTGCATGAAGGCAACCATTATCCGGGGGGAAGCCAAACACCGGAtt                                                           >  1:214658/1‑239 (MQ=255)
                                                                                                                                                                                tttttgGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGTCAGCAAAACAGCGGATTACa                                                        <  1:247427/238‑1 (MQ=255)
                                                                                                                                                                                                            cggcATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGAAGAAATTCTTtgctg                             >  1:850881/1‑239 (MQ=255)
                                                                                                                                                                                                                     agagCGAATTGATGGATCAAAAAAAATTGCCGGTTATTTTGCTGGGCCTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGGTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGGGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:534248/239‑1 (MQ=255)
                                                                                                                                                                                                                      gagCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:966773/238‑1 (MQ=255)
                                                                                                                                                                                                                      gagCGAATGGATGGAACAAAAAAATCTGCCGGTTATTTTGCTGGGCTTGGATGGTTGGCCGGTTTAGGACGATACCGCGGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:346214/238‑1 (MQ=255)
                                                                                                                                                                                                                       agCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg                                                                                              >  1:814543/1‑164 (MQ=255)
                                                                                                                                                                                                                       agCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACgg                                                                                              <  2:814543/164‑1 (MQ=255)
                                                                                                                                                                                                                        gCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:330672/236‑1 (MQ=255)
                                                                                                                                                                                                                        gCGAATTGAAGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGAGACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:319359/236‑1 (MQ=255)
                                                                                                                                                                                                                        gCGAATGGAGGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGAGGGGTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGGTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGAc                     <  1:749225/236‑1 (MQ=255)
                                                                                                                                                                                                                                        aacaaaTCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTg  >  1:547896/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                         
CGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTG  >  NC_000913/3699032‑3699498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: