| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 225739 = | 160 (1.820) | 7 (0.080) +ACTTCA |
3/420 | NT | 4.9% | intergenic (+164/‑20) | alaV/rrlH | tRNA‑Ala/23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 4037483 | 117 (1.330) | intergenic (+148/‑36) | alaT/rrlA | tRNA‑Ala/23S ribosomal RNA of rrnA operon | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 177 total aligned reads displayed.
GGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGA > NC_000913/225502‑225974 | ggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGa > 1:648959/1‑239 (MQ=35) tataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGaaa < 1:768474/238‑1 (MQ=35) taGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAACGTTTCACGGCGAAGTTTTGCTCTTTAAAATTCTGGACCAAGCTCAAACTT‑GAACCACTGAAAAATGGAATTTGTTCCTGAGTCTCTCCAATTTTCGCAACACGATGATGAAACGCCACAAAAAt > 2:563328/1‑239 (MQ=11) taGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGACCAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCACGAAACa > 1:1072697/1‑238 (MQ=25) ccAGCGGGGAGAGCGCCTGCTTTGCACGCAGGAGGTTTGCGGTTCGATCCCGCATAGCCCCAACATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCtg < 2:948930/237‑2 (MQ=255) cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAAAATCTTCg > 1:812437/1‑239 (MQ=25) aGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCgg > 1:596262/1‑239 (MQ=35) gggaggggcgcTGCTTTGCACGCAGGAGGTCTGCGTTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTtg < 1:1086043/229‑1 (MQ=255) gagCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAGCGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCCCAAGAAACATCTTCGGGttttcgg > 1:665454/1‑234 (MQ=255) tttgccgggagggggTCTGCGGTTTGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATCCTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAc < 2:175012/230‑1 (MQ=255) tttGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAc < 1:968242/239‑1 (MQ=35) tgtaCGCAGGAGGTTTGCGGTTCCATCCCCCACAGCTCCACCATCTCCGTAGTGGTTAAATAAAAAATACTTCAGAGGTGT‑CCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGAAACACGATGATGGATTGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa < 2:672625/236‑1 (MQ=11) tGCCCGGAGGAGGTCTGCGGTTCGATCCCGCATAGCCCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa < 1:592054/239‑1 (MQ=25) aggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa > 1:1119916/1‑238 (MQ=35) gaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca < 1:451139/238‑1 (MQ=35) aggTTTTCGGTTCGATCCCGCATAGCTCCCCCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGGGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca < 2:1079822/237‑1 (MQ=255) aggTCTGGGGTTCGATCCCGAATAGCTCCACCATCTCTGTAATGGTTAAATAAAAAATTCTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGG‑TCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca < 1:149684/236‑1 (MQ=255) aggTCTCAGGTTCGAGTCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGGAAAGGTTCACTGCGAAGTGTTGCTCTTGAAAAATCTGGATCAAGCTGAAAATT‑GAAACACGGAACAATGAAAGTTTCTCGTGAGTCTCTCAAATTTTCGTAAAACGATGATGGAACGCAAGAAGCATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca < 1:138644/237‑1 (MQ=11) tGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAACATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGa > 1:704730/1‑239 (MQ=25) tGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAAAATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACggggaa > 2:997488/1‑235 (MQ=25) cGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAACCGCCAAAGCGGACCGGGTGGag > 2:900246/1‑237 (MQ=255) cATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGCCAGTccg > 1:562188/1‑237 (MQ=25) cTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGTTGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGCGGATGCCCTGGCGGTCAGAGGCg > 1:204543/1‑239 (MQ=25) cTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTCCACGGTGGATGCCCTGGCCGTCAGAGGCg > 1:925631/1‑239 (MQ=25) cTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTTGCAGTCAGAGGCg > 1:93848/1‑239 (MQ=25) cTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCg > 1:774001/1‑239 (MQ=35) ccaTCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGCCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGa > 1:862343/1‑214 (MQ=25) aTCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTTCGAAGTTTTGCTCTGTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg < 1:1062893/239‑1 (MQ=25) aTCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg < 1:1270628/239‑1 (MQ=35) tctGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGCCAGAGGGAATGAAGGACg > 1:1089329/1‑239 (MQ=25) gTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAGTCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACa > 2:497300/1‑164 (MQ=38) gTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACa < 1:497300/164‑1 (MQ=38) gTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGt > 1:1161175/1‑237 (MQ=35) aGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTa > 1:135912/1‑239 (MQ=35) gTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAACTCTGGATCAAGCTGAAAATT‑GAAACACTGAACATTGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAACGACTAAGCGTACACTGGGGATGCCCGGGCGGTCAGAGGCGATGAAAGACGGACTaa > 2:1021416/1‑239 (MQ=11) gTTAAATAAAAAATTCTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTaa < 2:18463/236‑1 (MQ=21) gTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGACGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGACAGTTGTTCGTGCGTCTCTAAAATTTTAGCAACACGAGAATGGATCGCCAAAAACACCTTAGGCTTGTGAGGTTAAGCGACTAAGCGCCCACGGTGGAGGCCCTTGAAGCCAGAGGCGTTGGGGGACGAGCtcactt > 2:723527/1‑234 (MQ=11) gTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTaa > 1:858676/1‑236 (MQ=18) gTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAGGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGGGAATGCCCTGGCAATCAGAGGGGCTGAAGGAcaggcaaaaca > 2:305156/1‑229 (MQ=11) gTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGCCTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGagaggctaa > 2:114511/1‑228 (MQ=21) gTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTaa > 1:18463/1‑236 (MQ=34) aaataaaAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGTTTGTGAGGTTAAGCAACTAGTCGTACACGGTGGATGCCCTGGCATCCAGAGGCGTTGAAGGACTGGCTAATCTGCg > 1:1227270/1‑239 (MQ=11) attaaaaaTATTTCAGA‑GTGTTCCTTCAATGGTTCCCTGCGAAATTTTGCTCTTTAAAAATCTGGATCAAGGTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGAt < 2:648959/236‑1 (MQ=11) aaTACTTCAGA‑GTTGAACTGAAAAGTTTCACTGCGAAGTTTTGCTATTAAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGt < 2:1246964/239‑1 (MQ=255) ttCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca < 2:501655/177‑1 (MQ=35) ttCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca > 1:501655/1‑177 (MQ=35) ttCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTa < 1:73287/239‑1 (MQ=33) ctttatggtgtTCCTGCAAGAGTTCTCTGGTAAGTTTTGGTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTTAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACGAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGt < 2:463662/232‑1 (MQ=11) tCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTaa > 1:1035779/1‑239 (MQ=33) tcgcgttttccTGCAAAGGTTTAATTCGTAATTTTGCCTTTTAAAAATCTGGATCAAACTGAAAATT‑GAAAACATGAACAATTAAAGTTGTTCGTGAGTCTCTCAAATGTCAGCAAAACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAg < 2:479731/230‑1 (MQ=11) aga‑gTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAgg > 1:3107/1‑239 (MQ=33) a‑gTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGGTAAGCGTCGGTAAgggg > 1:1118615/1‑237 (MQ=18) a‑gTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGt < 1:359920/233‑1 (MQ=33) tACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGACCAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGCCTAAGAGTACCCGGTGGATACCCTGGAAGTCAGAGGGGAGAAGGGACGGTCTAAACGGGGAAAAACGTCggacaggcgaagt > 2:43022/1‑228 (MQ=11) aCCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGatat < 1:1192478/238‑1 (MQ=33) cccgaaaaGGCTCGCGGCGGAGTTTCGCACATTAAAAACGTGGAGCCAGCTGAAAAGT‑CAAACACTGAACAAGGAAAGTTGTTCGTGGGTCTCTCAAAAGCTCGCAAAACGATGATGGATCGCAAGAAAGAGCTGCGGGTTGTGAGGTTAAGGGACTAAGCGTACGCGGTGGATGTGCTGGCAGTCAGAGGCGATGAAGGACGTGCTAACCTGCGATAAGCGTCGGTAAGGTGATATGa < 2:1119196/234‑1 (MQ=11) ccTGAAAAGTTTTACTGCGAAGTTTTGCTTTTTAAAACTCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAAGTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGa < 2:350008/239‑1 (MQ=255) cttcAAAGTTTTATTGGGAATTTTTGCTCTTATAAAATCTGGTTCAAGCTGAAAATT‑GAAACACTTAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTGCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGaa < 2:596262/236‑1 (MQ=11) cTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCGTGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGaa < 1:563328/239‑1 (MQ=18) cAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGAACACGGTGGATGCCCTGGAAGTCAGAGGCGATGAAGGACTGGCAAATCTGCGATAAGGGCCGGAAAGGGGaaagcgtgg > 2:359920/1‑230 (MQ=11) cGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCCGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATCGATCGCAAGAAACATCTTCGCGTTGTGAGCTTAAGCGACTAAACGTACACGGTGGATGCCCTGGCAGGCCGAGGCGATGAAGTACGTGCCAATCTGCGCTCACGGCCGGTAGGGAGCTATGAGCGGATATAAAAGGCGa > 2:836658/1‑239 (MQ=11) aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATTAACCGTTATAACCGGCGAtt > 1:1123761/1‑239 (MQ=18) aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGAtt > 1:584282/1‑239 (MQ=33) aaGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGGGTAATGAACCGTTATAACCGGCGAt > 1:606637/1‑238 (MQ=18) aGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTaa < 1:658125/131‑1 (MQ=37) gTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTGTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGAttt < 1:1134824/238‑1 (MQ=18) ttccttttAAAAATTTGGATCAAGCAGAAATTT‑GAAACCTGGAACAAAGAAAGTGGTTCGTGAGTCCCTCAAATTTTCGCAACACGAAGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAACGGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGAGATTTCCGaa < 2:622360/234‑1 (MQ=11) tgcttgttAAAAATTTGGAGCAAGCTGAAAATT‑GAAACACTGAACCAGGAAAGTTGTTCGGGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGaa < 2:774001/233‑1 (MQ=255) tGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGaa < 1:1294567/239‑1 (MQ=33) tGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGaa < 1:145586/239‑1 (MQ=33) ctctTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGGGATATGAACCGTTATAACCGGCGATTTCCGAATg > 1:345947/1‑239 (MQ=18) tttAAAAATCTTGATTAAGCTGAAAAAT‑GAAACAATGAAAAAGGAAAGTTGGTCGTGAGTTCCTTAAATTTTCGCAACACGGTGATGGATTGCAAGAAACATCTTCGGGTTGTGAGGTTAAGGGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGTGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATgggg < 2:132384/239‑1 (MQ=11) ttAAAAAACTGGATGAAGTGAAAAATT‑GAAACACCGAAAAAGGAAAGGTGGTCGGGATGCTGTCAAATTTGCGCAACACGATGAGGGATCGGAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGGACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGa < 2:878748/239‑1 (MQ=11) tAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGTTGAAGGACGTGCTAATCTGCGTTAACCGTCGGTAAGGTGATAGGAACCGTTATAACCGGCGATTTCCGAATGGGGaa > 1:534882/1‑239 (MQ=16) tgggacaaacggAAAATT‑GAAACACTGAAAAATGAAAGTTGTGCGGTGTTCTTCAAAATTTGCGTAACACGATGAGGGATCGCAAGAAACATCTTCGGGTTGGGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAgtg < 2:1089329/228‑1 (MQ=11) tGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAgtg > 1:1100819/1‑239 (MQ=33) tCAAGCTGAAAATT‑GAAACCCTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGtt < 1:290980/239‑1 (MQ=18) ttaaaaTT‑GAAACCCTGAACAATGAAAGTTGTTCGGGAGTCTCTCAAATTTTCGCAACACGTTGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGaca < 1:43022/237‑1 (MQ=18) aaaaTTGGAAACA‑TGAACAATGAAATTTGTTCGTGAGTCTCTCAAATTTTCGCATCACGGTGATGGATCGCAAGAAACAGCTGCGGGTTGTGAGGTTAAGCGACTAAGCGTAAACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATAGGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGacaca < 2:616865/239‑1 (MQ=11) aaaaTT‑GAAACTCGGTACCATTAAAGTTGTTCGCGAGTTTCTCAAATTGTGGTAACACGGTGATGGATCGCAAGAACCATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTTCTAAGCTGCGATAAGCGTCGGTAAGGTGATATGAGCCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGGTTCGgcaca < 2:1218700/239‑1 (MQ=11) aaaCACTGAACAAGGAAAGGGGTGCGTGAGTCGTTCAAATTTTCGCAAAACGATGATGGAGCGCAAGAAGCATCTTCGGGTTGGGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCGTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGGAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCAt < 2:925631/239‑1 (MQ=11) acacTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTa < 1:114511/239‑1 (MQ=33) cTGAACAATGAAAGTTGTTCGTGAGTCTCTAAAATTTTGCGAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACt < 1:1204377/239‑1 (MQ=16) cTGAACAAGGAAAGGTGTTCGGGAGTCTTCCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACt < 1:833286/239‑1 (MQ=12) aaCAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGGGTTTCGACCCACTACACTTA‑ACTgc > 1:362886/1‑237 (MQ=255) aTGAAAGTTGTTCGGGAGTCTCTCAAATTTTCGCAACACGATGATGTATCGCAAGAAACATCTTCGGGTTGGGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCa < 1:723527/239‑1 (MQ=17) gttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg < 1:1223389/120‑1 (MQ=35) gttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGGGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAAt > 1:624351/1‑239 (MQ=17) gttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATAGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg > 2:1223389/1‑120 (MQ=25) gTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAgg < 2:1035779/239‑1 (MQ=32) gAGTTTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGc < 1:454910/238‑1 (MQ=17) tcAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCggg > 1:1005100/1‑239 (MQ=32) aaaTTTTCGCAACCAGATGGGGGGTCGGAAGAAACATCTTGGGGGTGGGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCggggg < 2:708349/239‑1 (MQ=11) aaTTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGa < 1:711346/239‑1 (MQ=32) tCGCAACACGATGATTGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGa < 1:426570/239‑1 (MQ=17) tCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGa < 1:305156/239‑1 (MQ=32) tCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGa < 1:349146/239‑1 (MQ=32) gaaaCACGATTGTGGTTCGCAAGAAACTTCTTAGGGTTGGGAGGTTAAGGGACTAAGCGTACACGGGGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGaaa < 2:606637/237‑1 (MQ=11) aagtGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTAcc > 1:899891‑M1/5‑233 (MQ=255) cAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGAAGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCGGCGCTAAGCGCCGGTAAGGCGATATGAACCGTTATCACCGCCGGTTTCCGAATGGGGAAACACAGTGAGTTTCTAAACACCAT‑ATAATACTGACTACATAAGTTCATCAGGCGAACAGGGGGAACGTAAAAATCATAGAACCCagagaa > 2:698218/1‑237 (MQ=2) | GGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGA‑GTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT‑GAAACACTGAACAATGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGTCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTA‑ACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGA > NC_000913/225502‑225974 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |