Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | 100% | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1979486 = | 0 (0.000) | 39 (0.440) | 28/432 | NT | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
* | ? | NC_000913 | = 1979489 | 0 (0.000) | 72 (0.820) | 43/432 | NT | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region |
Only 100 of 125 total aligned reads displayed.
TGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCACCTG > NC_000913/1979258‑1979727 | ctcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAacaaactaaggaaggt < 1:650219‑M2/218‑8 (MQ=255) tacttaacataaatgTATAAGTCATACTTTTGGTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGTTACGATAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGAAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCTCAACAAACTAAggaaggtgcgagc < 1:1047710‑M1/232‑14 (MQ=255) gcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAgg > 1:258663‑M1/219‑239 (MQ=255) acaTAAATGTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtcc < 1:1138751‑M1/238‑20 (MQ=255) acaTAAATGTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAAACTGTTAAGAAGTGTGTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAAGCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtcc < 1:282485‑M1/238‑20 (MQ=255) aataaaatgtaATTGTCCTTCTTTTGTTTTGAG‑GTATTTTCAATCTGTTAAAAAGGTTTTCGCTACGTTAGCAAACAATAATTAAACAGGAATCATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAACCCCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACCCTTAC‑CGCACAACAAACTAAtgaaggtgagaacaagtcc < 2:601963‑M1/235‑20 (MQ=255) gtatgtttttcacggttgccaaccgttttcgggcggaccaaatgatacgtgaggtgaagaatacacactaaaaactggggataacgccttaaatggagaagaaacggtctaaataggctgattcaaggcatgtacgggagaaaaaatcggcacaaacaggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGc > 2:696991‑M1/218‑239 (MQ=255) cATAAATGTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtc > 1:421679‑M1/1‑219 (MQ=255) tattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt > 1:1219354‑M1/212‑239 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGCCACTTAC‑CGCAACACAAACTAAggaaggtgcgaacaagtccctgatatgaga > 1:1078680‑M1/1‑209 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga > 1:994808‑M1/1‑209 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCAATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagcccctgatatgaga > 1:571973‑M1/1‑209 (MQ=255) gccaacctgtttcgggcggaccaaatgatacgtcagttggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaag > 1:675236‑M1/201‑216 (MQ=255) aCTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACCGACACTTAC‑CGCACAACAAAATAAagaaagggcgaacaagtccctaaaataaaatcattttt > 2:761612‑M1/1‑201 (MQ=255) aCTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGCCACTTCC‑CGCACACCAAACTCAggaaggtgcgaccaagtccctgatatagaatcatgttt > 1:580785‑M1/1‑201 (MQ=255) aCTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaccaagtccctgatatgagatcatgttt > 1:322801‑M1/1‑201 (MQ=255) aacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgtta > 1:1008772‑M1/198‑238 (MQ=255) ttgGGTGTA‑TTTCAATTTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCAAAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:190177‑M1/239‑48 (MQ=255) ttgGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:761612‑M1/239‑48 (MQ=255) ttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAAGTTTAATGAAATg < 1:1131644‑M1/49‑1 (MQ=255) ttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaacaatttccccgcttattcgcaccttccCAAATTAAATACAAAGAAAGGCAACAACCAACTTAATGTTACTAAAATg < 2:262272‑M1/49‑1 (MQ=255) tcgggcggaacaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGt > 1:127350‑M1/190‑239 (MQ=255) gggTGTA‑TTTCAATCTTGTAAAAAGTTTTTCGCTACGCTAGCAAGAAAAAAAGAAACAGGAATAAACGAAATTGGATTTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 2:925397‑M1/239‑50 (MQ=255) tA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata < 1:513618‑M1/239‑55 (MQ=255) caaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 1:312726‑M1/180‑239 (MQ=255) aatgatacgtcagtgggagaaatcttattaaaaaccgggtataacgccttaaatggcgaagaaacggtctaaatatgctgatttaagggatttaggggagaaaaaatcggctcaaacatgaagaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGGTTTACATATAtt > 2:953880‑M1/178‑239 (MQ=255) tCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:691507‑M1/239‑63 (MQ=255) tGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:487604‑M1/222‑48 (MQ=255) tttttCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgag > 1:784710‑M1/1‑165 (MQ=255) tttttCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCCCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACATACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgag < 2:784710‑M1/194‑30 (MQ=255) agagaactccctaaaaactggggaaaacgccttaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcactttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATg > 2:1084939‑M1/161‑238 (MQ=255) gagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACa > 1:570218‑M1/160‑172 (MQ=255) tctcacttaaaagtgggtataaagccttgaaggggaaaaaaacggtcaaaaaaggcttattcaaggcatttacgggagaaaaaatcggctcaaacaggaagaaatgaaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgag > 2:609740‑M1/156‑238 (MQ=255) tctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgag > 1:165891‑M1/156‑238 (MQ=255) tcacaaaaaactggggttaaggccttaaatggcgaagaaacggtcaaaataggctgagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCGTATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt > 2:531025‑M1/154‑239 (MQ=255) aaactggggataacggcttaaaaggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTaca > 1:196489‑M1/147‑239 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctggttcaaggcattgacgggagaagaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaacttccCTAATTAAATAACAAGAAAGTCAACAATCAACTTCATTATAATGAAATGTGTTACATAAATTACACACTTGTTAAATgcagagaatcaaaaaaatctt < 2:980947‑M1/98‑11 (MQ=255) aaaaTGAAACAGGAATTAGTGAAATGGGATGTTGCCAACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAAATATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGTACAGCAAACGAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:322801‑M1/239‑97 (MQ=255) aaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTTCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 2:421679‑M1/239‑99 (MQ=255) tCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTCTTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttaatcatgagtcatcaccttaccttcgccgcaagtgaattaagaagtaag > 1:1194220‑M1/1‑125 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc > 2:1085785‑M1/122‑176 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc < 1:1085785‑M1/55‑1 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaa < 1:636119‑M1/118‑1 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTAGTTTTAAACAGAAACTTAC‑CGCACAACAAACTACggcaggtacgaaaaagtacctgatatgagctcatgtttgtcatctggagccataaaacaggggtcatcatgcgtcatcaacttaccttcgccgacagtgaattcagcaagaagagc > 2:917038‑M1/1‑123 (MQ=255) aaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc > 1:483318‑M1/1‑121 (MQ=255) tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacggagtcagccgagaagaatttccccgcttatgcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata > 1:830374‑M1/111‑234 (MQ=255) taaagagactgattcaaggcatttacgggagaaaaaatcggctcaaacaagaagaaatgaaatgacggagtcagccgagaagaattaccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCa > 1:425223‑M1/109‑238 (MQ=255) tGCGCACAGTCAAAATAACTCACCGTAAATGATCATCTGCTATAAATAATCACTTTCATGCCATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtaatctggagccctagaacaggggtcatcatgagtcattaacttaccttcgccgacagtgaatacagcagtaagagccgtcaaacaaaa > 2:1195095‑M1/1‑111 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaaagggttcatcattagtcctcaacttaccttcgccgaacgagaatccagaagaaagtgccgacgcaccaaaaaaaagatt > 2:96489‑M1/1‑102 (MQ=255) cAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga < 1:46046‑M1/236‑136 (MQ=255) acgcaccGTAAATAATCATTTCCTATAAATAATCACTTGCAATCAATACCAAGAAATGTATTTTTAGACATACACTTAC‑CGCACAACAGACTAAggaaggtgcgaacaagtccctgataggaaatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 2:565439‑M1/236‑146 (MQ=255) cTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 1:1246919‑M1/1‑93 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagacatcaacttaccttcgccgacagtgaattcaccagtaagcgccgtcagcccagaaaaaaaatttttttgtcca > 2:857863‑M1/1‑92 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagaaaccgccgtcagaccagaacaaaaatcttcttttcc > 2:487583‑M1/1‑92 (MQ=255) ccGTAAATAATCATCTTCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca < 2:483318‑M1/239‑151 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCtt > 1:262272‑M1/85‑239 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagggattttcttgtcccgcatggagccgat > 1:345233‑M1/1‑78 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACTCTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgc < 1:917038‑M1/239‑166 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatccacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccccatggagcaaattcgc > 2:980225‑M1/1‑74 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcaaattctgc > 2:716657‑M1/1‑74 (MQ=255) aataaaCCCTTTCTTTCAATACCAGAGAAGCTTTTTTTAAACAGACCCTTAC‑CGCACAACAAACGAAggaaggtgcaaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggca < 2:1168853‑M1/239‑173 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACGGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaca > 1:1161973‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagccgattctgccatggcaaaaaa > 1:968703‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggccaaaca > 1:743862‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaca > 1:731452‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaaaccagaaaagagattttcttgtcccgaatgaagaagatcctgccacggcaaaaaa > 2:1221321‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 2:760128‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataaaacagggttcatcatgcgtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcagggggcagattctgcaatggcaaaacc > 1:233085‑M1/1‑62 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt < 2:1094147‑M1/6‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:1094147‑M1/58‑63 (MQ=255) tttCATGCAATTCCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:1111659‑M1/198‑141 (MQ=255) tCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcatcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggtgcagattctgccatggcaaaccatggtgg > 1:743312‑M1/1‑56 (MQ=255) tGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggatcagattctgccatggcaaaacatgttggaag > 1:1138572‑M1/1‑53 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGAc > 1:283304‑M1/51‑239 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaacttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGAc > 1:48281‑M1/49‑237 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcacc > 1:961888‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaaatggtggaagtcatc > 1:929644‑M1/1‑48 (MQ=255) aaGCTATTTTTAAACAGA‑ACTTTCGCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgccatctggagccatagaacagggttcatcatgagtcatcaacttaacttcgccgacagtgaattcagcagtaagcgccgtcaggccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtt < 1:664332‑M1/239‑200 (MQ=255) gCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatctagccgtttt > 1:82394‑M1/1‑38 (MQ=255) gCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtttt > 1:403243‑M1/1‑38 (MQ=255) gCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattaagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggag > 2:322206‑M1/1‑38 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtga > 2:611720‑M1/35‑174 (MQ=255) aCAGACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaag > 1:407937‑M1/1‑27 (MQ=255) gACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcctggagcagattctgccatggaacaccatgtgggaagtcaccccgccgttttaccccaaggctggt > 2:982744‑M1/1‑24 (MQ=255) gACACTTAC‑CGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaaaaaagagattttcttgtcccgactggagcggatactgcactggcaaaaaatggtggaagtcatccagccgttttaccccacagctggt > 2:821532‑M1/1‑24 (MQ=255) cttttcccgccaacaaactaaggaaggtgcagacaagtccctgatatgagattatgtttgacatctggagccatagaacagtgttcatcatgagtcaccaccttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaat < 2:961888‑M1/229‑219 (MQ=255) cacaACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcattaagcgccgtcagaccagaaaagagatttgcttgtcccgcatggagcagattctgccatggcaaaacatggcgggagtcatcgggccgttttaccccaaggctggaaatggccggcg > 2:809941‑M1/1‑13 (MQ=255) caacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagtgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggcgggtaatggccggcga > 1:60401‑M1/1‑11 (MQ=255) caacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagggccgtcagaccagcaaagagattttcatgtcccgcaaggagacgattttgccatggcaaaacatggtggaattcatcgaccgggtttaccccaagcctggtaaaggcgggaga > 2:869522‑M1/1‑11 (MQ=255) aaCTAAggaaggtgcgaacaagtccttgatatgaaatcttgtttgtcatctggggccatagaacagggttcatcaagagtcatcaacttactgtcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat < 2:345233‑M1/239‑234 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat < 1:809941‑M1/239‑234 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaatgctggtaatggccggcgaccttatcc > 1:958440‑M1/1‑3 (MQ=255) aggaaggtgtaaaaaagtcccgtgaatgggatcatttttgtcatcgggagccagagaacagggttcatcatgggtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 2:237139‑M1/239‑239 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 1:1046061‑M1/239‑239 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:1094437‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:1094437‑M1/63‑63 (MQ=255) aggaaggtgcgaacaaggccctgatctgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 1:858529‑M1/239‑239 (MQ=255) aggaaggtgcaaacaagtcccgaattggaagtcttgtttggcatctggagccatagaacaggtctcatcatggatcatcaacttaccatcgacgacagtgaattcagcagtaagcgctgtcagaccagaaaagatattttcttgtcccgcagggagcatgttcggccatggcaaaacatggtggaagtcatggagccgttttaccccaaggctggtaatggccggcgcccttatccgct < 2:1205981‑M1/239‑239 (MQ=255) aggaaggtcccaccaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcataatgagtcaacaaattaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 2:217570‑M1/239‑239 (MQ=255) aggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 1:401211‑M1/239‑239 (MQ=255) | TGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTA‑TTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAC‑CGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCACCTG > NC_000913/1979258‑1979727 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |