| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,274,349 | T→G | 24.7% | G57G (GGT→GGG) | yejB → | microcin C ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,274,349 | 0 | T | G | 24.7% | 90.3 / 10.4 | 60 | G57G (GGT→GGG) | yejB | microcin C ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (11/32); new base G (14/3); total (25/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.23e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGT > NC_000913/2274113‑2274582 | gATACCGGGTGGTATGACGGCAATAAAGCGGCCAACCTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGgtgt < 1:1232426/239‑1 (MQ=255) ttcccTGGTGGTTTGACGTCAATAAAGCGGCCAAACGGCCGTCCGCCAGCAAAAAGGGAGAGTAGATGGGCGTTTACCTGATTCCCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGtt < 2:334957/236‑1 (MQ=255) ctccttggtggTAACCCGACTATAAGGCGGCAAAACTGCCTGCCGCCGGCAAACGGGGAGAGTAGATGGGTGCTTCCCGGATTCGCCTTGTGTTGCTGGGGATCCCAACATTAGGGGGGATTATCCCCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGtt < 2:422122/234‑1 (MQ=255) tggtggTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCCGGCGGGG‑AAGGGGtttggt > 1:1169391/1‑234 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGTTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGCG‑CAGGTGTTccggacgccca > 1:460102/1‑229 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGG‑AAGGGGTTCGTgccagc > 1:1020012/1‑237 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGCGGGGG‑CAGGGGTTACTgcccgcc > 1:209327/1‑238 (MQ=255) tATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGCCGACAAGGCCATCGCCGCCATTGAGGTTGCTAATGCCGGGGGATTACCCGGCACAGGCGGGG‑GAGGGGTTCGTgccgtcc > 2:580067/1‑234 (MQ=255) aTGGCGTCAAAAAAGCGCACAAGCGCCCTGCCGCCGGAAAAGAGGGAGAGTCAATGGGCGCTTCCCTGATTCCCCTTCTGTTGCGGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCACCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCAt < 2:946722/239‑1 (MQ=255) cGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGCGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATAGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGG‑AAGGGGTTCGTGCCAGCCAtcggc > 1:45371/1‑235 (MQ=255) gTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTT‑AAGGGGTTCGTGCCAGCCATGCGCa > 1:584185/1‑239 (MQ=255) aTAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCAGCCATGCGCCAACg > 1:1169437/1‑239 (MQ=255) aggggCCAAACTGCGGGCCGGCAGCAAACAGGGAGGTTAAATGGGCGTTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGgtg < 1:94425/236‑1 (MQ=255) cGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGCCGGTG‑AAGGGGTTCGTGGCGGCCATGGCCAAACGGgggtg > 1:1245350/1‑238 (MQ=255) cGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CGGGCGGTCCGGTCGACCAGGCCATCCCCGCCATTGGTTTTGGTAGTGCCGGAGTATTACCCGGCGCAGGGGGTG‑AAAGGGGTCGTTCAACCCATGGGAAAACggagggc > 2:1104920/1‑234 (MQ=255) gTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCCGCCATGCGCAAACGGGGGTCgcgcaaataagc > 1:829707/1‑227 (MQ=255) agCCAGCAAAAAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGAc < 1:752061/237‑1 (MQ=255) agTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGGATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCAGCCATGCGCCAACGGGGGTCGGCCATATCAGCGACAGCAAT‑T‑ACCCGGGCgg > 1:661967/1‑238 (MQ=255) aGATGGGCTCTTCCCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGAcg < 1:1264007/238‑1 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGa > 1:1059464/1‑238 (MQ=255) cTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCAGCCATGGGCCAACGGGGTTCGGCAATATCAGCGACAGGAAT‑T‑ACCCGGGCGGACCCGGAtttaa > 1:1177468/1‑235 (MQ=255) tttccTGATTCGCCGTCTGTGGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTTCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATc < 1:1150425/236‑1 (MQ=255) aCCAGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCCCCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCa < 1:242590/239‑1 (MQ=255) ttGCTGGTGATCCCAACATTATGGGCGATTATCCCCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCt < 1:662047/234‑1 (MQ=255) ggTGATCCCAACATTAGGGGCGATTAACACCATCAACTTTTTCATCATGCAAATTGCGC‑CTGGCGGTTCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACt < 1:1296612/238‑1 (MQ=255) gTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCCTCGCCGCCATTGAGTTTGGTAATGCCGGAGCATTACCCGGCGCAGGCGGCG‑ACGGTGGTCGTGCCAGCCATGAGCAAAACGGGGTCGGGACTATCAACGACAGTAATAT‑ACC‑CGGCGGACGCGGGGCAGAACCCAAAGTGATCCCGgaggagacta > 2:1155148/1‑231 (MQ=255) tgtcccaactgttATGGGCGATTATCACATACCAATTTTTCATCGTGCAAAGTGCGC‑CGGGCGGCCGGGTCGACCGGGCCATCGCCGCCAGTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTTCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGTCAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCAt < 2:19175/228‑1 (MQ=255) tCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGGG‑AAGGGGTTCGGGCCAGCCCAGCGCAAACGGGGGGCGGCAATATCAGCGGCCGTAAT‑TAACCGGGGGGGCCG‑GGGTTATATCCAAAAAGGATCGGCGAAATCACTCaccat > 2:662047/1‑235 (MQ=255) ccAACATTTTGGGGTATTACCCCCATCAACTTTTTCAGGTTGAAAATGGCGC‑CTGGGGGCCCGGTCGCCCAGGCCTTGGCCGCCATTGAGTTTGTTAATGCCGGAGTATTTCCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCAAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTa < 2:1245350/239‑1 (MQ=255) tGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACCGTAAT‑T‑ACCGTGGCGGACGCGGGTTAGATCCCGAAGTGATCCCTGAGATCACCCACCGCTACGGGTTTgt > 1:1198639/1‑238 (MQ=255) ggCCATTACCACCATCAACTTTTTCATCGGGCAAAGTGCGC‑CGGGGGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGAt < 1:481173/238‑1 (MQ=255) aTTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGGGGCGGACGCGGGTTAGATCCAGAAGGGATCGCTTGGATCACTCATCGCCCCGGGTTTGGTAAAcc > 1:546968/1‑239 (MQ=255) ttactcccATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCg < 1:1104920/233‑1 (MQ=255) tATCCCCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGa < 1:1024348/239‑1 (MQ=255) taTCAATTTTTTCATGTTGCAAATTGCGC‑CTGGGGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGTGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACg < 1:319790/238‑1 (MQ=255) cATCAATTTTTTCATCGTGCAAATTGCGC‑CGGGCGGTCCGGTCGACCGGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACg < 1:478103/239‑1 (MQ=255) tttCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGGGATCGCTGAGATAACTCATCGCTACGGGTTTGATAAGCCGATCCACGCACGTTACt > 1:879276/1‑239 (MQ=255) tctGCACATTGTGCGCTGGCTGCCCGCTGGCCCAGGCTACGGCCTCCATTGGTTTCGGTAACGCAGGAGTTTTGCAGGGCGCCGGCGGTG‑ACGGTGTTCGTGCCACCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ATCGTGGCGGACGAGGATTAGATCAAGAAGTGCACGCTGAGATCACTAATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTATGTCaaa < 2:1246216/237‑1 (MQ=255) tGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCACACCATGCGCAAACGGGTGGCGGCCATACAAGCGACAGTAAT‑T‑ACAGCGGCGGACGCGGGGTAGATCCCGAAGGGGTCGCGGAGGAGACTACACCCTACGGTGTTGATACCGCCATCCACCGACGTTCACTCAAAAt > 2:4266/1‑238 (MQ=255) tccggtcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCt > 1:396903/1‑179 (MQ=255) tccggtcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCt < 2:396903/179‑1 (MQ=255) ccggtcGACCAGGGCATCGCCGCCATTGGGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTCCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCt < 1:1222713/238‑1 (MQ=255) gtcGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTTGATCCAGAAGTGATCGCTGCGATCACTCATCGCTACGGGTTTGTTAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCCCTTTGa > 1:744955/1‑239 (MQ=255) gACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGAtt < 1:574287/238‑1 (MQ=255) cgCCTTCCCCGCTTTTTAGTTTTTTTATGCCGGGGTTTTACCCGGGGGCGGCCGTG‑AAGGTGTTCGGGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCg < 2:584185/238‑1 (MQ=255) tcctgggcgccATTGGGTTTTGGAAGGCCGGAGTATTACCCGGCGCGGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGGCGGCAATATCATCGACAGTAAT‑T‑TCCGGGGCGGAAGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGa < 2:1198639/231‑1 (MQ=255) ccATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGa < 1:351342/238‑1 (MQ=255) tCGCCGGCAGTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGc < 1:290063/239‑1 (MQ=255) ccATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGGGATCGCTGGGATCACTCCTCGCTACGGTTTTGGTAAGCCGATCCACGGACGTTACCTCCAAATGCTCTGGGACTACATCCGCTTTGATTTTTGCGATAGCCTGtt > 1:381433/1‑238 (MQ=255) tttggattGCCGGTGTATTTCCCGTCGC‑GTGGGTGTAAGGTTTGTGTGGCAGCCATGCGCAAACGGGTGTCGGCAATATCAACTACAGTAAG‑T‑GCCGTGGCGGAAGAGGATCAGATCCTGAAGTTATATGTGAGATCTTTCATGGCTACTGTTTTGATAAGCCGAGCCACGAACGTTACTTCAAAATGCTCTGGGACTACGTCCGCTTTGATTTTGGCGATGGCTTGTTTCGCGGCGcc < 2:460102/232‑1 (MQ=255) ggTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGGGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCCAAAAGCTCTGGGCATACAACCGCTTTGATTTTGGCGATAACCTGTTTCGCAACGCCTc > 1:540335/1‑239 (MQ=255) tattttcccGGGGCAGGCTGTC‑ACGGGTTTAGGGCCAGCCCTTGACAAACGGGTGCCTGCAATAGCAGCGACAGGAAT‑G‑TCCGTGGCGGACTGGTATTAGAGCCAGAAGTGATCGCTGAGATCACTCATCGGTACGGTTTTGATAAGCCTATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 2:1110136/232‑1 (MQ=255) gTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:305940/238‑1 (MQ=255) gTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGGGCCAGCCATGCGCAAACGGGTGTAGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:709411/238‑1 (MQ=255) aaaTTACCCGGGGCGGGCCGTG‑AAGGTGATCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:365042/236‑1 (MQ=255) tATTCCCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGc < 1:1220779/237‑1 (MQ=255) tATTACCCGGCGCAGGCGGTG‑AAGGGGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGct < 1:1013785/175‑1 (MQ=255) ccGGCTCAGGCGGTG‑AAGGTGGTCGGGCCCGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGCAGCGGATTAGATCCAGAAGTTATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTaaa < 2:1059464/239‑1 (MQ=255) cgcAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGGGTCGGCAATATCAGCGGCAGGAAT‑T‑ACCGGGGGGGACGCGGCTTTGATCCACAAGTGATCGCTGGGAACACTCCTCGCGCACGTTTTGGTAAAGCGCACCCCGAACGTTACTTCCAAAAGCCCCGGGCGCACATCCGCTTTGATTTTTGCGATAGCCCTTTTCTCAGCGCCCCGGGGCGCACGCCGTTTTAAAACa > 2:10282/1‑239 (MQ=255) cggggggagaGGGGTTCGGGCGACACATTCGCAACCGGGGGTGGGCAATATAAGCGACAGTAAT‑T‑ACCGGGGGGGAGGCGGATGAGATCCAGAAGTGATCGGTGAGACCACACATCGCTACGGTTTTGATAAGCCGATCCACGAACGGTACTTGAAAATGCTCTGGGACTACATCCGATTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGAAAGt < 2:1169391/229‑1 (MQ=255) aaGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGt < 1:1155148/238‑1 (MQ=255) | GATACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAGATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGC‑CTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTG‑AAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAAT‑T‑ACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGT > NC_000913/2274113‑2274582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |